RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
FOXN3-217ENST00000557572 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.86
FOXN3-217ENST00000557572 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
FOXN3-217ENST00000557572 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
FOXN3-217ENST00000557572 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
FOXN3-217ENST00000557572 GPR37O15354 613 aa9.7□□□□□ -0.86
FOXN3-217ENST00000557572 ADAM23O75077 832 aa9.7□□□□□ -0.86
FOXN3-217ENST00000557572 WHAMMQ8TF30 809 aa9.7□□□□□ -0.86
FOXN3-217ENST00000557572 UPP2O95045 317 aa9.69□□□□□ -0.86
FOXN3-217ENST00000557572 MS4A1P11836 297 aa9.69□□□□□ -0.86
FOXN3-217ENST00000557572 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
FOXN3-217ENST00000557572 ITPKCQ96DU7 683 aa9.68□□□□□ -0.86
FOXN3-217ENST00000557572 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
FOXN3-217ENST00000557572 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
FOXN3-217ENST00000557572 ARID5BQ14865 1188 aa9.67□□□□□ -0.86
FOXN3-217ENST00000557572 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
FOXN3-217ENST00000557572 SOS2Q07890 1332 aaPredicted RBP9.65□□□□□ -0.86
FOXN3-217ENST00000557572 MSTNO14793 375 aa9.65□□□□□ -0.86
FOXN3-217ENST00000557572 RNFT1Q5M7Z0 435 aa9.65□□□□□ -0.86
FOXN3-217ENST00000557572 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
FOXN3-217ENST00000557572 EVA1BQ9NVM1 165 aa9.65□□□□□ -0.86
FOXN3-217ENST00000557572 SMYD5Q6GMV2 418 aa9.64□□□□□ -0.87
FOXN3-217ENST00000557572 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
FOXN3-217ENST00000557572 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
FOXN3-217ENST00000557572 C6orf229H3BNL8 230 aa9.63□□□□□ -0.87
FOXN3-217ENST00000557572 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
FOXN3-217ENST00000557572 PTPRNQ16849 979 aa9.62□□□□□ -0.87
FOXN3-217ENST00000557572 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
FOXN3-217ENST00000557572 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.61□□□□□ -0.87
FOXN3-217ENST00000557572 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
FOXN3-217ENST00000557572 PTSQ03393 145 aa9.61□□□□□ -0.87
FOXN3-217ENST00000557572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.61□□□□□ -0.878e-7■■■□□ 14.6
FOXN3-217ENST00000557572 NANOS1Q8WY41 292 aaKnown RBP9.61□□□□□ -0.87
FOXN3-217ENST00000557572 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
FOXN3-217ENST00000557572 NR5A1Q13285 461 aa9.59□□□□□ -0.87
FOXN3-217ENST00000557572 CDK15Q96Q40 435 aa9.59□□□□□ -0.87
FOXN3-217ENST00000557572 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
FOXN3-217ENST00000557572 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
FOXN3-217ENST00000557572 NR3C2P08235 984 aa9.58□□□□□ -0.88
FOXN3-217ENST00000557572 MDM2Q00987 491 aaPredicted RBP9.58□□□□□ -0.88
FOXN3-217ENST00000557572 MEIOBQ8N635 442 aa9.58□□□□□ -0.88
FOXN3-217ENST00000557572 KRTAP9-2Q9BYQ4 174 aa9.58□□□□□ -0.88
FOXN3-217ENST00000557572 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
FOXN3-217ENST00000557572 SPTLC1O15269 473 aa9.57□□□□□ -0.88
FOXN3-217ENST00000557572 FDX1P10109 184 aa9.57□□□□□ -0.88
FOXN3-217ENST00000557572 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
FOXN3-217ENST00000557572 CDC14CA4D256 554 aa9.56□□□□□ -0.88
FOXN3-217ENST00000557572 FIGNL2A6NMB9 653 aa9.56□□□□□ -0.88
FOXN3-217ENST00000557572 TTLL8A6PVC2 850 aa9.56□□□□□ -0.88
FOXN3-217ENST00000557572 VWA5B2Q8N398 1253 aa9.56□□□□□ -0.88
FOXN3-217ENST00000557572 CCDC155Q8N6L0 562 aa9.56□□□□□ -0.88
FOXN3-217ENST00000557572 MAP3K10Q02779 954 aa9.55□□□□□ -0.88
FOXN3-217ENST00000557572 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
FOXN3-217ENST00000557572 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
FOXN3-217ENST00000557572 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
FOXN3-217ENST00000557572 LYPD4Q6UWN0 246 aa9.54□□□□□ -0.88
FOXN3-217ENST00000557572 Q8N3U1 123 aa9.54□□□□□ -0.88
FOXN3-217ENST00000557572 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
FOXN3-217ENST00000557572 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
FOXN3-217ENST00000557572 CTHP32929 405 aa9.53□□□□□ -0.88
FOXN3-217ENST00000557572 GRM5P41594 1212 aa9.53□□□□□ -0.88
FOXN3-217ENST00000557572 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
FOXN3-217ENST00000557572 DCAF5Q96JK2 942 aa9.53□□□□□ -0.88
FOXN3-217ENST00000557572 ADAMTS2O95450 1211 aa9.52□□□□□ -0.89
FOXN3-217ENST00000557572 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
FOXN3-217ENST00000557572 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
FOXN3-217ENST00000557572 AGERQ15109 404 aa9.51□□□□□ -0.89
FOXN3-217ENST00000557572 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
FOXN3-217ENST00000557572 ITGB2P05107 769 aa9.5□□□□□ -0.89
FOXN3-217ENST00000557572 ITGA6P23229 1130 aa9.5□□□□□ -0.89
FOXN3-217ENST00000557572 PHF20L1A8MW92 1017 aa9.49□□□□□ -0.89
FOXN3-217ENST00000557572 PROCP04070 461 aa9.49□□□□□ -0.89
FOXN3-217ENST00000557572 ENAMQ9NRM1 1142 aa9.49□□□□□ -0.89
FOXN3-217ENST00000557572 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
FOXN3-217ENST00000557572 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
FOXN3-217ENST00000557572 CELA2BP08218 269 aaPredicted RBP9.47□□□□□ -0.89
FOXN3-217ENST00000557572 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
FOXN3-217ENST00000557572 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
FOXN3-217ENST00000557572 SRSF11Q05519 484 aaKnown RBP9.45□□□□□ -0.9
FOXN3-217ENST00000557572 BEND7Q8N7W2 519 aaPredicted RBP9.45□□□□□ -0.9
FOXN3-217ENST00000557572 FSHRP23945 695 aa9.44□□□□□ -0.9
FOXN3-217ENST00000557572 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
FOXN3-217ENST00000557572 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
FOXN3-217ENST00000557572 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
FOXN3-217ENST00000557572 IRF6O14896 467 aa9.43□□□□□ -0.9
FOXN3-217ENST00000557572 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
FOXN3-217ENST00000557572 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
FOXN3-217ENST00000557572 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
FOXN3-217ENST00000557572 NDUFV2P19404 249 aa9.42□□□□□ -0.9
FOXN3-217ENST00000557572 MTMR2Q13614 643 aa9.42□□□□□ -0.9
FOXN3-217ENST00000557572 PODNQ7Z5L7 613 aa9.42□□□□□ -0.9
FOXN3-217ENST00000557572 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
FOXN3-217ENST00000557572 SPDYE5A6NIY4 337 aa9.4□□□□□ -0.9
FOXN3-217ENST00000557572 CLCN1P35523 988 aa9.4□□□□□ -0.9
FOXN3-217ENST00000557572 MAP10Q9P2G4 905 aa9.4□□□□□ -0.9
FOXN3-217ENST00000557572 SPINT1O43278 529 aa9.39□□□□□ -0.91
FOXN3-217ENST00000557572 BAG6P46379 1132 aa9.39□□□□□ -0.91
FOXN3-217ENST00000557572 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-217ENST00000557572 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
FOXN3-217ENST00000557572 NEDD1Q8NHV4 660 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms