RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
ABCD4-227ENST00000557554 SPATA31A1Q5TZJ5 1347 aa15.36■□□□□ 0.05
ABCD4-227ENST00000557554 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
ABCD4-227ENST00000557554 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
ABCD4-227ENST00000557554 TRPM3Q9HCF6 1732 aaPredicted RBP15.31■□□□□ 0.04
ABCD4-227ENST00000557554 IFT172Q9UG01 1749 aa15.31■□□□□ 0.04
ABCD4-227ENST00000557554 ITGAEP38570 1179 aa15.31■□□□□ 0.04
ABCD4-227ENST00000557554 PMFBP1Q8TBY8 1022 aa15.31■□□□□ 0.04
ABCD4-227ENST00000557554 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
ABCD4-227ENST00000557554 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
ABCD4-227ENST00000557554 PTGER2P43116 358 aa15.29■□□□□ 0.04
ABCD4-227ENST00000557554 BARGINQ6ZT62 677 aa15.29■□□□□ 0.04
ABCD4-227ENST00000557554 PDGFDQ9GZP0 370 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-227ENST00000557554 CHD4Q14839 1912 aa15.29■□□□□ 0.04
ABCD4-227ENST00000557554 CRYBG1Q9Y4K1 1723 aa15.29■□□□□ 0.04
ABCD4-227ENST00000557554 CEP350Q5VT06 3117 aa15.28■□□□□ 0.04
ABCD4-227ENST00000557554 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
ABCD4-227ENST00000557554 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
ABCD4-227ENST00000557554 PRDM11Q9NQV5 511 aa15.26■□□□□ 0.03
ABCD4-227ENST00000557554 SYT17Q9BSW7 474 aa15.25■□□□□ 0.03
ABCD4-227ENST00000557554 PIK3C2GO75747 1445 aa15.25■□□□□ 0.03
ABCD4-227ENST00000557554 PLSCR1O15162 318 aa15.24■□□□□ 0.03
ABCD4-227ENST00000557554 ANO8Q9HCE9 1232 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-227ENST00000557554 ANKARQ7Z5J8 1434 aa15.24■□□□□ 0.03
ABCD4-227ENST00000557554 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
ABCD4-227ENST00000557554 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
ABCD4-227ENST00000557554 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
ABCD4-227ENST00000557554 CHRNA2Q15822 529 aa15.23■□□□□ 0.03
ABCD4-227ENST00000557554 PROM2Q8N271 834 aa15.23■□□□□ 0.03
ABCD4-227ENST00000557554 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
ABCD4-227ENST00000557554 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
ABCD4-227ENST00000557554 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
ABCD4-227ENST00000557554 KIAA0232Q92628 1395 aa15.23■□□□□ 0.03
ABCD4-227ENST00000557554 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
ABCD4-227ENST00000557554 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
ABCD4-227ENST00000557554 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
ABCD4-227ENST00000557554 MYOM1P52179 1685 aa15.22■□□□□ 0.03
ABCD4-227ENST00000557554 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
ABCD4-227ENST00000557554 FHDC1Q9C0D6 1143 aaPredicted RBP15.21■□□□□ 0.03
ABCD4-227ENST00000557554 PRR36Q9H6K5 1346 aa15.2■□□□□ 0.02
ABCD4-227ENST00000557554 ZBTB7AO95365 584 aa15.2■□□□□ 0.02
ABCD4-227ENST00000557554 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
ABCD4-227ENST00000557554 SGIP1Q9BQI5 828 aa15.2■□□□□ 0.02
ABCD4-227ENST00000557554 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
ABCD4-227ENST00000557554 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
ABCD4-227ENST00000557554 TCP11L2Q8N4U5 519 aa15.19■□□□□ 0.02
ABCD4-227ENST00000557554 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
ABCD4-227ENST00000557554 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
ABCD4-227ENST00000557554 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
ABCD4-227ENST00000557554 C11orf95C9JLR9 678 aaPredicted RBP15.18■□□□□ 0.02
ABCD4-227ENST00000557554 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
ABCD4-227ENST00000557554 PTF1AQ7RTS3 328 aa15.18■□□□□ 0.02
ABCD4-227ENST00000557554 PEAK1Q9H792 1746 aa15.17■□□□□ 0.02
ABCD4-227ENST00000557554 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
ABCD4-227ENST00000557554 EVA1CP58658 441 aa15.17■□□□□ 0.02
ABCD4-227ENST00000557554 ZC3H6P61129 1189 aaKnown RBP15.17■□□□□ 0.02
ABCD4-227ENST00000557554 CFAP70Q5T0N1 1121 aa15.17■□□□□ 0.02
ABCD4-227ENST00000557554 SBF2Q86WG5 1849 aa15.17■□□□□ 0.02
ABCD4-227ENST00000557554 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
ABCD4-227ENST00000557554 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
ABCD4-227ENST00000557554 GIGYF1O75420 1035 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-227ENST00000557554 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-227ENST00000557554 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
ABCD4-227ENST00000557554 DLC1Q96QB1 1528 aa15.13■□□□□ 0.01
ABCD4-227ENST00000557554 NGDNQ8NEJ9 315 aaKnown RBP15.13■□□□□ 0.01
ABCD4-227ENST00000557554 POGKQ9P215 609 aa15.13■□□□□ 0.01
ABCD4-227ENST00000557554 PHRF1Q9P1Y6 1649 aaKnown RBP15.13■□□□□ 0.01
ABCD4-227ENST00000557554 HIRIP3Q9BW71 556 aaPredicted RBP15.12■□□□□ 0.01
ABCD4-227ENST00000557554 MTFR1LQ9H019 292 aa15.12■□□□□ 0.01
ABCD4-227ENST00000557554 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
ABCD4-227ENST00000557554 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
ABCD4-227ENST00000557554 LMO7Q8WWI1 1683 aa15.11■□□□□ 0.01
ABCD4-227ENST00000557554 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
ABCD4-227ENST00000557554 OVOS2A0A0G2JMS6 1433 aa15.1■□□□□ 0.01
ABCD4-227ENST00000557554 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
ABCD4-227ENST00000557554 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
ABCD4-227ENST00000557554 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
ABCD4-227ENST00000557554 CPDO75976 1380 aa15.1■□□□□ 0.01
ABCD4-227ENST00000557554 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
ABCD4-227ENST00000557554 TXNRD1Q16881 649 aa15.08■□□□□ 0
ABCD4-227ENST00000557554 ARXQ96QS3 562 aa15.08■□□□□ 0
ABCD4-227ENST00000557554 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0
ABCD4-227ENST00000557554 GOLGB1Q14789 3259 aaKnown RBP15.08■□□□□ 0
ABCD4-227ENST00000557554 ATP7BP35670 1465 aa15.08■□□□□ 0
ABCD4-227ENST00000557554 STK32BQ9NY57 414 aa15.07■□□□□ 0
ABCD4-227ENST00000557554 EIF3AQ14152 1382 aaKnown RBP15.07■□□□□ 0
ABCD4-227ENST00000557554 BCL9O00512 1426 aa15.07■□□□□ 0
ABCD4-227ENST00000557554 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
ABCD4-227ENST00000557554 MARCH10Q8NA82 808 aaPredicted RBP15.06■□□□□ 0
ABCD4-227ENST00000557554 GPR162Q16538 588 aa15.05■□□□□ -0
ABCD4-227ENST00000557554 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
ABCD4-227ENST00000557554 ADGRB1O14514 1584 aa15.05■□□□□ -0
ABCD4-227ENST00000557554 CRB1P82279 1406 aa15.04■□□□□ -0
ABCD4-227ENST00000557554 USP19O94966 1318 aa15.04■□□□□ -0
ABCD4-227ENST00000557554 DDB1Q16531 1140 aa15.04■□□□□ -0
ABCD4-227ENST00000557554 NUDT16Q96DE0 195 aaKnown RBP15.04■□□□□ -0
ABCD4-227ENST00000557554 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
ABCD4-227ENST00000557554 LRRC37A3O60309 1634 aa15.03■□□□□ -0
ABCD4-227ENST00000557554 AATKQ6ZMQ8 1374 aa15.03■□□□□ -0
ABCD4-227ENST00000557554 POLR3AO14802 1390 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms