RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
FOXN3-216ENST00000557496 SLC24A3Q9HC58 644 aa6.92□□□□□ -1.3
FOXN3-216ENST00000557496 WASF2Q9Y6W5 498 aa6.92□□□□□ -1.3
FOXN3-216ENST00000557496 VARSP26640 1264 aaKnown RBP6.91□□□□□ -1.3
FOXN3-216ENST00000557496 TUSC1Q2TAM9 212 aa6.91□□□□□ -1.3
FOXN3-216ENST00000557496 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
FOXN3-216ENST00000557496 LIMD1Q9UGP4 676 aa6.91□□□□□ -1.3
FOXN3-216ENST00000557496 CTHP32929 405 aa6.9□□□□□ -1.3
FOXN3-216ENST00000557496 NFX1Q12986 1120 aaKnown RBP6.9□□□□□ -1.3
FOXN3-216ENST00000557496 QPCTQ16769 361 aa6.9□□□□□ -1.3
FOXN3-216ENST00000557496 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
FOXN3-216ENST00000557496 MPNDQ8N594 471 aa6.9□□□□□ -1.3
FOXN3-216ENST00000557496 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
FOXN3-216ENST00000557496 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-216ENST00000557496 WFS1O76024 890 aa6.89□□□□□ -1.31
FOXN3-216ENST00000557496 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
FOXN3-216ENST00000557496 CAPN5O15484 640 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-216ENST00000557496 LILRB3O75022 631 aa6.88□□□□□ -1.31
FOXN3-216ENST00000557496 BMP1P13497 986 aa6.88□□□□□ -1.31
FOXN3-216ENST00000557496 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
FOXN3-216ENST00000557496 NNTQ13423 1086 aa6.87□□□□□ -1.31
FOXN3-216ENST00000557496 NUTM2BA6NNL0 878 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-216ENST00000557496 NUTM2EB1AL46 878 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-216ENST00000557496 CLK2P49760 499 aaKnown RBP6.86□□□□□ -1.31
FOXN3-216ENST00000557496 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
FOXN3-216ENST00000557496 NUTM2DQ5VT03 806 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-216ENST00000557496 NUTM2AQ8IVF1 878 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-216ENST00000557496 FOXJ1Q92949 421 aa6.86□□□□□ -1.31
FOXN3-216ENST00000557496 TERTO14746 1132 aaKnown RBP6.85□□□□□ -1.31
FOXN3-216ENST00000557496 ADH1CP00326 375 aa6.85□□□□□ -1.31
FOXN3-216ENST00000557496 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
FOXN3-216ENST00000557496 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
FOXN3-216ENST00000557496 TSC1Q92574 1164 aa6.85□□□□□ -1.31
FOXN3-216ENST00000557496 CDK15Q96Q40 435 aa6.85□□□□□ -1.31
FOXN3-216ENST00000557496 WIPF1O43516 503 aa6.84□□□□□ -1.31
FOXN3-216ENST00000557496 RTL5Q5HYW3 569 aaPredicted RBP6.84□□□□□ -1.31
FOXN3-216ENST00000557496 KLF16Q9BXK1 252 aaPredicted RBP6.84□□□□□ -1.31
FOXN3-216ENST00000557496 TIMP2P16035 220 aa6.83□□□□□ -1.32
FOXN3-216ENST00000557496 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
FOXN3-216ENST00000557496 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
FOXN3-216ENST00000557496 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
FOXN3-216ENST00000557496 SH3RF1Q7Z6J0 888 aa6.82□□□□□ -1.32
FOXN3-216ENST00000557496 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
FOXN3-216ENST00000557496 ZFP42Q96MM3 310 aa6.82□□□□□ -1.32
FOXN3-216ENST00000557496 AGERQ15109 404 aa6.81□□□□□ -1.32
FOXN3-216ENST00000557496 NBPF14Q5TI25 921 aa6.81□□□□□ -1.32
FOXN3-216ENST00000557496 MRPL14Q6P1L8 145 aaKnown RBP6.81□□□□□ -1.32
FOXN3-216ENST00000557496 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
FOXN3-216ENST00000557496 C1QTNF2Q9BXJ5 285 aa6.81□□□□□ -1.32
FOXN3-216ENST00000557496 POLR3EQ9NVU0 708 aa6.81□□□□□ -1.32
FOXN3-216ENST00000557496 NR3C2P08235 984 aa6.8□□□□□ -1.32
FOXN3-216ENST00000557496 NR5A1Q13285 461 aa6.8□□□□□ -1.32
FOXN3-216ENST00000557496 ARID5BQ14865 1188 aa6.8□□□□□ -1.32
FOXN3-216ENST00000557496 SH3BP5LQ7L8J4 393 aa6.8□□□□□ -1.32
FOXN3-216ENST00000557496 NXF1Q9UBU9 619 aaKnown RBP6.8□□□□□ -1.32
FOXN3-216ENST00000557496 GRM5P41594 1212 aa6.79□□□□□ -1.32
FOXN3-216ENST00000557496 ZIC2O95409 532 aaPredicted RBP6.78□□□□□ -1.32
FOXN3-216ENST00000557496 NPAS3Q8IXF0 933 aa6.78□□□□□ -1.32
FOXN3-216ENST00000557496 TRMT44Q8IYL2 757 aaKnown RBP6.78□□□□□ -1.32
FOXN3-216ENST00000557496 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
FOXN3-216ENST00000557496 PURBQ96QR8 312 aaKnown RBP6.78□□□□□ -1.32
FOXN3-216ENST00000557496 ZFAND3Q9H8U3 227 aa6.78□□□□□ -1.32
FOXN3-216ENST00000557496 GPBP1L1Q9HC44 474 aaPredicted RBP6.78□□□□□ -1.32
FOXN3-216ENST00000557496 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
FOXN3-216ENST00000557496 INSM1Q01101 510 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-216ENST00000557496 CTDSPL2Q05D32 466 aa6.77□□□□□ -1.33
FOXN3-216ENST00000557496 SCARF1Q14162 830 aa6.77□□□□□ -1.33
FOXN3-216ENST00000557496 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
FOXN3-216ENST00000557496 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
FOXN3-216ENST00000557496 FBXO31Q5XUX0 539 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-216ENST00000557496 GPKOWQ92917 476 aaPredicted RBP eCLIP6.77□□□□□ -1.33
FOXN3-216ENST00000557496 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
FOXN3-216ENST00000557496 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.33
FOXN3-216ENST00000557496 MAGEB6P1A0A0J9YX57 407 aa6.76□□□□□ -1.33
FOXN3-216ENST00000557496 FSHRP23945 695 aa6.76□□□□□ -1.33
FOXN3-216ENST00000557496 SLC16A10Q8TF71 515 aa6.76□□□□□ -1.33
FOXN3-216ENST00000557496 H3BM21 787 aa6.75□□□□□ -1.33
FOXN3-216ENST00000557496 DDRGK1Q96HY6 314 aa6.75□□□□□ -1.33
FOXN3-216ENST00000557496 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
FOXN3-216ENST00000557496 STK17AQ9UEE5 414 aa6.75□□□□□ -1.33
FOXN3-216ENST00000557496 VEGFBP49765 207 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 ERFEQ4G0M1 354 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 PPP2R2DQ66LE6 453 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 VASH1Q7L8A9 365 aaPredicted RBP6.74□□□□□ -1.33
FOXN3-216ENST00000557496 MEIOBQ8N635 442 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 PROCA1Q8NCQ7 364 aaPredicted RBP6.74□□□□□ -1.33
FOXN3-216ENST00000557496 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 IRF7Q92985 503 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 BCANQ96GW7 911 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 CARD14Q9BXL6 1004 aa6.74□□□□□ -1.33
FOXN3-216ENST00000557496 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
FOXN3-216ENST00000557496 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
FOXN3-216ENST00000557496 FKBPLQ9UIM3 349 aa6.73□□□□□ -1.33
FOXN3-216ENST00000557496 GMPRP36959 345 aa6.72□□□□□ -1.33
FOXN3-216ENST00000557496 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
FOXN3-216ENST00000557496 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
FOXN3-216ENST00000557496 CCDC116Q8IYX3 515 aa6.72□□□□□ -1.33
FOXN3-216ENST00000557496 ERBB4Q15303 1308 aa6.72□□□□□ -1.33
FOXN3-216ENST00000557496 NR6A1Q15406 480 aa6.71□□□□□ -1.34
FOXN3-216ENST00000557496 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms