RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 CCDC24Q8N4L8 307 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 EVA1BQ9NVM1 165 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 CDV3Q9UKY7 258 aaKnown RBP5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
HMGB1P14-201ENST00000557424 FKBPLQ9UIM3 349 aa5.54□□□□□ -1.52
HMGB1P14-201ENST00000557424 FCF1Q9Y324 198 aaKnown RBP5.54□□□□□ -1.52
HMGB1P14-201ENST00000557424 LCE2BO14633 110 aa5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 WNT7BP56706 349 aa5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 EIF4G2P78344 907 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 CTDSPL2Q05D32 466 aa5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 BPHLQ86WA6 291 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 ZNF516Q92618 1163 aa5.53□□□□□ -1.52
HMGB1P14-201ENST00000557424 F12P00748 615 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P14-201ENST00000557424 PDXDC2PQ6P474 469 aa5.52□□□□□ -1.53
HMGB1P14-201ENST00000557424 PROSER2Q86WR7 435 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P14-201ENST00000557424 MTMR14Q8NCE2 650 aa5.52□□□□□ -1.53
HMGB1P14-201ENST00000557424 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
HMGB1P14-201ENST00000557424 AGERQ15109 404 aa5.51□□□□□ -1.53
HMGB1P14-201ENST00000557424 PRDM9Q9NQV7 894 aa5.51□□□□□ -1.53
HMGB1P14-201ENST00000557424 RNF223E7ERA6 249 aa5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 ABL2P42684 1182 aa5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 NBPF20Q3BBV1 942 aa5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 PPP1R18Q6NYC8 613 aa5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 LRRN4Q8WUT4 740 aa5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 V9GY48 417 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P14-201ENST00000557424 ZBBXA8MT70 800 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 TRIM32Q13049 653 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 ZBTB33Q86T24 672 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 FAM174AQ8TBP5 190 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 SLC10A4Q96EP9 437 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 ARHGAP9Q9BRR9 750 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
HMGB1P14-201ENST00000557424 PER1O15534 1290 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 VARSP26640 1264 aaKnown RBP5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 NR1H3Q13133 447 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 NR6A1Q15406 480 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 RNF20Q5VTR2 975 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 ZNF511Q8NB15 262 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 NKX2-3Q8TAU0 364 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 GJD4Q96KN9 370 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 GDPD2Q9HCC8 539 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 MAP10Q9P2G4 905 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 COG6Q9Y2V7 657 aa5.48□□□□□ -1.53
HMGB1P14-201ENST00000557424 SLC19A1P41440 591 aa5.47□□□□□ -1.53
HMGB1P14-201ENST00000557424 SEMA3FQ13275 785 aa5.47□□□□□ -1.53
HMGB1P14-201ENST00000557424 EHBP1Q8NDI1 1231 aa5.46□□□□□ -1.54
HMGB1P14-201ENST00000557424 CCDC97Q96F63 343 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P14-201ENST00000557424 TRIM34Q9BYJ4 488 aa5.46□□□□□ -1.54
HMGB1P14-201ENST00000557424 HMX1Q9NP08 348 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P14-201ENST00000557424 TBC1D2BQ9UPU7 963 aa5.46□□□□□ -1.54
HMGB1P14-201ENST00000557424 DZIP3Q86Y13 1208 aaKnown RBP5.45□□□□□ -1.54
HMGB1P14-201ENST00000557424 SEPT12Q8IYM1 358 aa5.45□□□□□ -1.54
HMGB1P14-201ENST00000557424 MAGEB6P1A0A0J9YX57 407 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 TRAK2O60296 914 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 DHX9Q08211 1270 aaKnown RBP5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 TRMT44Q8IYL2 757 aaKnown RBP5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 CCDC82Q8N4S0 544 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 SIRT1Q96EB6 747 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 ESF1Q9H501 851 aaKnown RBP5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 SERPINA10Q9UK55 444 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 MAP4K5Q9Y4K4 846 aa5.44□□□□□ -1.54
HMGB1P14-201ENST00000557424 WNT7AO00755 349 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 PDIA4P13667 645 aaKnown RBP5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 LAPTM4AQ15012 233 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 SH3BP5LQ7L8J4 393 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 ZNF598Q86UK7 904 aaKnown RBP5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 MPNDQ8N594 471 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 BAP1Q92560 729 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 CLUAP1Q96AJ1 413 aa5.43□□□□□ -1.54
HMGB1P14-201ENST00000557424 LZTS3O60299 673 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 SLFNL1Q499Z3 407 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 ZNF697Q5TEC3 545 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 SPRYD7Q5W111 196 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 NFATC2IPQ8NCF5 419 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 CALR3Q96L12 384 aaKnown RBP5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 CARD14Q9BXL6 1004 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 PRKD2Q9BZL6 878 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 PCDHB9Q9Y5E1 797 aa5.42□□□□□ -1.54
HMGB1P14-201ENST00000557424 ZBTB7CA1YPR0 619 aa5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 LINC01559Q495D7 138 aa5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 FBXO31Q5XUX0 539 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 SH3RF1Q7Z6J0 888 aa5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 ADAM32Q8TC27 787 aa5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 CCDC9Q9Y3X0 531 aaKnown RBP5.41□□□□□ -1.54
HMGB1P14-201ENST00000557424 PPEF1O14829 653 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 FBXO45P0C2W1 286 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 SH3BP2P78314 561 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 PDE4CQ08493 712 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 NR5A1Q13285 461 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 MAP7D1Q3KQU3 841 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 RC3H1Q5TC82 1133 aaKnown RBP5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 VASH1Q7L8A9 365 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 CYP4X1Q8N118 509 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 C1QTNF2Q9BXJ5 285 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 WASF2Q9Y6W5 498 aa5.4□□□□□ -1.54
HMGB1P14-201ENST00000557424 TTC24A2A3L6 582 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PRR20EP86478 221 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PRR20CP86479 221 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PRR20DP86480 221 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms