RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 NINLQ9Y2I6 1382 aa29.18■■■□□ 2.26
SEC23A-213ENST00000557280 ZEB1P37275 1124 aaPredicted RBP29.18■■■□□ 2.26
SEC23A-213ENST00000557280 LMOD2Q6P5Q4 547 aa29.17■■■□□ 2.26
SEC23A-213ENST00000557280 SPATA31A6Q5VVP1 1343 aa29.17■■■□□ 2.26
SEC23A-213ENST00000557280 POLR3GLQ9BT43 218 aa29.16■■■□□ 2.26
SEC23A-213ENST00000557280 KTN1Q86UP2 1357 aaKnown RBP29.15■■■□□ 2.26
SEC23A-213ENST00000557280 ARHGEF10O15013 1369 aa29.14■■■□□ 2.26
SEC23A-213ENST00000557280 NUTM2BA6NNL0 878 aaPredicted RBP29.14■■■□□ 2.26
SEC23A-213ENST00000557280 NUTM2EB1AL46 878 aaPredicted RBP29.14■■■□□ 2.26
SEC23A-213ENST00000557280 PLEKHG5O94827 1062 aa29.14■■■□□ 2.26
SEC23A-213ENST00000557280 NUTM2AQ8IVF1 878 aaPredicted RBP29.14■■■□□ 2.26
SEC23A-213ENST00000557280 ABCA3Q99758 1704 aa29.13■■■□□ 2.25
SEC23A-213ENST00000557280 KIF7Q2M1P5 1343 aa29.12■■■□□ 2.25
SEC23A-213ENST00000557280 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
SEC23A-213ENST00000557280 CRYBG1Q9Y4K1 1723 aa29.11■■■□□ 2.25
SEC23A-213ENST00000557280 NUTM2GQ5VZR2 741 aa29.11■■■□□ 2.25
SEC23A-213ENST00000557280 HDGFL2Q7Z4V5 671 aaPredicted RBP29.11■■■□□ 2.25
SEC23A-213ENST00000557280 CABLES1Q8TDN4 633 aa29.11■■■□□ 2.25
SEC23A-213ENST00000557280 ZNF692Q9BU19 519 aaPredicted RBP29.11■■■□□ 2.25
SEC23A-213ENST00000557280 ANKRD36BQ8N2N9 1353 aa29.11■■■□□ 2.25
SEC23A-213ENST00000557280 TERF2IPQ9NYB0 399 aa29.1■■■□□ 2.25
SEC23A-213ENST00000557280 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
SEC23A-213ENST00000557280 BRD4O60885 1362 aaPredicted RBP29.1■■■□□ 2.25
SEC23A-213ENST00000557280 EDC4Q6P2E9 1401 aaKnown RBP29.07■■■□□ 2.24
SEC23A-213ENST00000557280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.06■■■□□ 2.24
SEC23A-213ENST00000557280 ABTB2Q8N961 1025 aa29.06■■■□□ 2.24
SEC23A-213ENST00000557280 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
SEC23A-213ENST00000557280 WASHC2AQ641Q2 1341 aa29.04■■■□□ 2.24
SEC23A-213ENST00000557280 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
SEC23A-213ENST00000557280 CCDC7Q96M83 1385 aa29.03■■■□□ 2.24
SEC23A-213ENST00000557280 TTC21AQ8NDW8 1320 aa29.03■■■□□ 2.24
SEC23A-213ENST00000557280 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
SEC23A-213ENST00000557280 NME9Q86XW9 330 aa29.02■■■□□ 2.24
SEC23A-213ENST00000557280 ZRANB1Q9UGI0 708 aa29.02■■■□□ 2.24
SEC23A-213ENST00000557280 CARD14Q9BXL6 1004 aa29.01■■■□□ 2.23
SEC23A-213ENST00000557280 USP19O94966 1318 aa29■■■□□ 2.23
SEC23A-213ENST00000557280 MEX3CQ5U5Q3 659 aaKnown RBP29■■■□□ 2.23
SEC23A-213ENST00000557280 NSD3Q9BZ95 1437 aa28.99■■■□□ 2.23
SEC23A-213ENST00000557280 NLRP6P59044 892 aa28.98■■■□□ 2.23
SEC23A-213ENST00000557280 HAP1P54257 671 aaPredicted RBP28.97■■■□□ 2.23
SEC23A-213ENST00000557280 SLIT3O75094 1523 aa28.97■■■□□ 2.23
SEC23A-213ENST00000557280 C8orf37Q96NL8 207 aa28.96■■■□□ 2.23
SEC23A-213ENST00000557280 USP54Q70EL1 1684 aa28.96■■■□□ 2.23
SEC23A-213ENST00000557280 NLRP13Q86W25 1043 aa28.95■■■□□ 2.22
SEC23A-213ENST00000557280 USP31Q70CQ4 1352 aa28.94■■■□□ 2.22
SEC23A-213ENST00000557280 PANK3Q9H999 370 aa28.94■■■□□ 2.22
SEC23A-213ENST00000557280 OVOS2A0A0J9YW53 1432 aa28.94■■■□□ 2.22
SEC23A-213ENST00000557280 OVOS2Q6IE36 1432 aa28.94■■■□□ 2.22
SEC23A-213ENST00000557280 RGS17Q9UGC6 210 aaPredicted RBP28.91■■■□□ 2.22
SEC23A-213ENST00000557280 KIF20BQ96Q89 1820 aa28.91■■■□□ 2.22
SEC23A-213ENST00000557280 GCP02774 474 aa28.89■■■□□ 2.22
SEC23A-213ENST00000557280 PHF23Q9BUL5 403 aaPredicted RBP28.89■■■□□ 2.22
SEC23A-213ENST00000557280 NFAT5O94916 1531 aa28.89■■■□□ 2.21
SEC23A-213ENST00000557280 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
SEC23A-213ENST00000557280 FYB1O15117 783 aa28.88■■■□□ 2.21
SEC23A-213ENST00000557280 AFF2P51816 1311 aa28.88■■■□□ 2.21
SEC23A-213ENST00000557280 PLCH1Q4KWH8 1693 aa28.87■■■□□ 2.21
SEC23A-213ENST00000557280 SOX12O15370 315 aa28.87■■■□□ 2.21
SEC23A-213ENST00000557280 ZC3H6P61129 1189 aaKnown RBP28.87■■■□□ 2.21
SEC23A-213ENST00000557280 GGNBP2Q9H3C7 697 aa28.87■■■□□ 2.21
SEC23A-213ENST00000557280 FAM83GA6ND36 823 aa28.86■■■□□ 2.21
SEC23A-213ENST00000557280 NGLY1Q96IV0 654 aa28.86■■■□□ 2.21
SEC23A-213ENST00000557280 SLIT2O94813 1529 aa28.84■■■□□ 2.21
SEC23A-213ENST00000557280 COL14A1Q05707 1796 aaKnown RBP28.83■■■□□ 2.21
SEC23A-213ENST00000557280 CHRNA2Q15822 529 aa28.83■■■□□ 2.21
SEC23A-213ENST00000557280 PRDM11Q9NQV5 511 aa28.83■■■□□ 2.21
SEC23A-213ENST00000557280 CPDO75976 1380 aa28.83■■■□□ 2.21
SEC23A-213ENST00000557280 FNBP4Q8N3X1 1017 aaPredicted RBP28.82■■■□□ 2.2
SEC23A-213ENST00000557280 BCL9LQ86UU0 1499 aa28.81■■■□□ 2.2
SEC23A-213ENST00000557280 CGNL1Q0VF96 1302 aa28.81■■■□□ 2.2
SEC23A-213ENST00000557280 COG3Q96JB2 828 aa28.81■■■□□ 2.2
SEC23A-213ENST00000557280 LMO7Q8WWI1 1683 aa28.8■■■□□ 2.2
SEC23A-213ENST00000557280 NRAPQ86VF7 1730 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 ZBTB7CA1YPR0 619 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 FBLN1P23142 703 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 KCNH5Q8NCM2 988 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 USP21Q9UK80 565 aa28.78■■■□□ 2.2
SEC23A-213ENST00000557280 NWD2Q9ULI1 1742 aa28.77■■■□□ 2.2
SEC23A-213ENST00000557280 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
SEC23A-213ENST00000557280 ANKRD26Q9UPS8 1709 aa28.76■■■□□ 2.19
SEC23A-213ENST00000557280 COL18A1P39060 1754 aa28.75■■■□□ 2.19
SEC23A-213ENST00000557280 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.75■■■□□ 2.19
SEC23A-213ENST00000557280 ARHGEF25Q86VW2 580 aa28.75■■■□□ 2.19
SEC23A-213ENST00000557280 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
SEC23A-213ENST00000557280 CAMTA1Q9Y6Y1 1673 aa28.74■■■□□ 2.19
SEC23A-213ENST00000557280 ZNF772Q68DY9 489 aaPredicted RBP28.74■■■□□ 2.19
SEC23A-213ENST00000557280 KNSTRNQ9Y448 316 aa28.74■■■□□ 2.19
SEC23A-213ENST00000557280 LTN1O94822 1766 aa28.74■■■□□ 2.19
SEC23A-213ENST00000557280 AMER1Q5JTC6 1135 aaPredicted RBP28.73■■■□□ 2.19
SEC23A-213ENST00000557280 ATRNO75882 1429 aa28.72■■■□□ 2.19
SEC23A-213ENST00000557280 AATKQ6ZMQ8 1374 aa28.72■■■□□ 2.19
SEC23A-213ENST00000557280 UNC5CLQ8IV45 518 aa28.71■■■□□ 2.19
SEC23A-213ENST00000557280 AXIN2Q9Y2T1 843 aa28.69■■■□□ 2.18
SEC23A-213ENST00000557280 NSD2O96028 1365 aa28.69■■■□□ 2.18
SEC23A-213ENST00000557280 QTRT2Q9H974 415 aaKnown RBP28.68■■■□□ 2.18
SEC23A-213ENST00000557280 MAP3K19Q56UN5 1328 aa28.68■■■□□ 2.18
SEC23A-213ENST00000557280 COL5A2P05997 1499 aaPredicted RBP28.67■■■□□ 2.18
SEC23A-213ENST00000557280 RRS1Q15050 365 aaKnown RBP28.67■■■□□ 2.18
SEC23A-213ENST00000557280 RGPD5Q99666 1765 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms