RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ARHGEF10O15013 1369 aa19.93■□□□□ 0.78
SLIRP-207ENST00000556831 NGLY1Q96IV0 654 aa19.92■□□□□ 0.78
SLIRP-207ENST00000556831 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
SLIRP-207ENST00000556831 ACEP12821 1306 aa19.91■□□□□ 0.78
SLIRP-207ENST00000556831 PPIP5K1Q6PFW1 1433 aa19.91■□□□□ 0.78
SLIRP-207ENST00000556831 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
SLIRP-207ENST00000556831 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
SLIRP-207ENST00000556831 CCDC125Q86Z20 511 aa19.9■□□□□ 0.78
SLIRP-207ENST00000556831 POLR3AO14802 1390 aaPredicted RBP19.9■□□□□ 0.78
SLIRP-207ENST00000556831 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
SLIRP-207ENST00000556831 FNBP4Q8N3X1 1017 aaPredicted RBP19.88■□□□□ 0.77
SLIRP-207ENST00000556831 SBNO2Q9Y2G9 1366 aa19.87■□□□□ 0.77
SLIRP-207ENST00000556831 PLEKHG3A1L390 1219 aa19.87■□□□□ 0.77
SLIRP-207ENST00000556831 NUTM2GQ5VZR2 741 aa19.87■□□□□ 0.77
SLIRP-207ENST00000556831 QTRT2Q9H974 415 aaKnown RBP19.87■□□□□ 0.77
SLIRP-207ENST00000556831 USP21Q9UK80 565 aa19.87■□□□□ 0.77
SLIRP-207ENST00000556831 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
SLIRP-207ENST00000556831 PHRF1Q9P1Y6 1649 aaKnown RBP19.85■□□□□ 0.77
SLIRP-207ENST00000556831 CABP1Q9NZU7 370 aa19.85■□□□□ 0.77
SLIRP-207ENST00000556831 SLIT2O94813 1529 aa19.85■□□□□ 0.77
SLIRP-207ENST00000556831 ATRNO75882 1429 aa19.85■□□□□ 0.77
SLIRP-207ENST00000556831 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
SLIRP-207ENST00000556831 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
SLIRP-207ENST00000556831 USP47Q96K76 1375 aa19.82■□□□□ 0.76
SLIRP-207ENST00000556831 YY1P25490 414 aa19.81■□□□□ 0.76
SLIRP-207ENST00000556831 EP400Q96L91 3159 aa19.81■□□□□ 0.76
SLIRP-207ENST00000556831 NRAPQ86VF7 1730 aa19.81■□□□□ 0.76
SLIRP-207ENST00000556831 AKAP12Q02952 1782 aa19.8■□□□□ 0.76
SLIRP-207ENST00000556831 GLI3P10071 1580 aa19.8■□□□□ 0.76
SLIRP-207ENST00000556831 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
SLIRP-207ENST00000556831 USP6P35125 1406 aa19.79■□□□□ 0.76
SLIRP-207ENST00000556831 BRD4O60885 1362 aaPredicted RBP19.79■□□□□ 0.76
SLIRP-207ENST00000556831 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
SLIRP-207ENST00000556831 PIK3C2AO00443 1686 aa19.78■□□□□ 0.76
SLIRP-207ENST00000556831 SSH2Q76I76 1423 aa19.78■□□□□ 0.76
SLIRP-207ENST00000556831 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
SLIRP-207ENST00000556831 TESK2Q96S53 571 aa19.78■□□□□ 0.76
SLIRP-207ENST00000556831 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.76
SLIRP-207ENST00000556831 CD163L1Q9NR16 1453 aa19.77■□□□□ 0.76
SLIRP-207ENST00000556831 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
SLIRP-207ENST00000556831 ABTB2Q8N961 1025 aa19.76■□□□□ 0.75
SLIRP-207ENST00000556831 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
SLIRP-207ENST00000556831 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
SLIRP-207ENST00000556831 COL14A1Q05707 1796 aaKnown RBP19.75■□□□□ 0.75
SLIRP-207ENST00000556831 MON2Q7Z3U7 1717 aa19.74■□□□□ 0.75
SLIRP-207ENST00000556831 KIAA0232Q92628 1395 aa19.74■□□□□ 0.75
SLIRP-207ENST00000556831 TMF1P82094 1093 aa19.74■□□□□ 0.75
SLIRP-207ENST00000556831 CHRNA2Q15822 529 aa19.74■□□□□ 0.75
SLIRP-207ENST00000556831 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
SLIRP-207ENST00000556831 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
SLIRP-207ENST00000556831 CPSF1Q10570 1443 aaKnown RBP19.73■□□□□ 0.75
SLIRP-207ENST00000556831 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
SLIRP-207ENST00000556831 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
SLIRP-207ENST00000556831 GJD4Q96KN9 370 aaPredicted RBP19.72■□□□□ 0.75
SLIRP-207ENST00000556831 BTG4Q9NY30 223 aa19.72■□□□□ 0.75
SLIRP-207ENST00000556831 USP19O94966 1318 aa19.72■□□□□ 0.75
SLIRP-207ENST00000556831 KTN1Q86UP2 1357 aaKnown RBP19.71■□□□□ 0.75
SLIRP-207ENST00000556831 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
SLIRP-207ENST00000556831 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
SLIRP-207ENST00000556831 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
SLIRP-207ENST00000556831 NINLQ9Y2I6 1382 aa19.7■□□□□ 0.74
SLIRP-207ENST00000556831 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
SLIRP-207ENST00000556831 TERF2IPQ9NYB0 399 aa19.7■□□□□ 0.74
SLIRP-207ENST00000556831 BRWD3Q6RI45 1802 aa19.69■□□□□ 0.74
SLIRP-207ENST00000556831 SLIT3O75094 1523 aa19.69■□□□□ 0.74
SLIRP-207ENST00000556831 TTC21BQ7Z4L5 1316 aa19.69■□□□□ 0.74
SLIRP-207ENST00000556831 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
SLIRP-207ENST00000556831 NLRP6P59044 892 aa19.67■□□□□ 0.74
SLIRP-207ENST00000556831 VPS72Q15906 364 aa19.67■□□□□ 0.74
SLIRP-207ENST00000556831 CCDC9Q9Y3X0 531 aaKnown RBP19.67■□□□□ 0.74
SLIRP-207ENST00000556831 CAMTA1Q9Y6Y1 1673 aa19.67■□□□□ 0.74
SLIRP-207ENST00000556831 TTC21AQ8NDW8 1320 aa19.67■□□□□ 0.74
SLIRP-207ENST00000556831 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
SLIRP-207ENST00000556831 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
SLIRP-207ENST00000556831 GCP02774 474 aa19.65■□□□□ 0.74
SLIRP-207ENST00000556831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.64■□□□□ 0.73
SLIRP-207ENST00000556831 SOX12O15370 315 aa19.63■□□□□ 0.73
SLIRP-207ENST00000556831 NME9Q86XW9 330 aa19.63■□□□□ 0.73
SLIRP-207ENST00000556831 COL18A1P39060 1754 aa19.62■□□□□ 0.73
SLIRP-207ENST00000556831 EDC4Q6P2E9 1401 aaKnown RBP19.62■□□□□ 0.73
SLIRP-207ENST00000556831 CPDO75976 1380 aa19.62■□□□□ 0.73
SLIRP-207ENST00000556831 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
SLIRP-207ENST00000556831 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
SLIRP-207ENST00000556831 MYOM1P52179 1685 aa19.62■□□□□ 0.73
SLIRP-207ENST00000556831 NFAT5O94916 1531 aa19.61■□□□□ 0.73
SLIRP-207ENST00000556831 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
SLIRP-207ENST00000556831 SPATA31A5Q5VU36 1347 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 SPATA31A7Q8IWB4 1347 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 USP54Q70EL1 1684 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 SENP3-EIF4A1A0A087X0R7 540 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 FAM98CQ17RN3 349 aaKnown RBP19.6■□□□□ 0.73
SLIRP-207ENST00000556831 SEPT12Q8IYM1 358 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 KCNH5Q8NCM2 988 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
SLIRP-207ENST00000556831 THSD7AQ9UPZ6 1657 aa19.59■□□□□ 0.73
SLIRP-207ENST00000556831 A0A0G2JS52 829 aa19.58■□□□□ 0.72
SLIRP-207ENST00000556831 MYT1Q01538 1121 aa19.58■□□□□ 0.72
SLIRP-207ENST00000556831 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
SLIRP-207ENST00000556831 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
SLIRP-207ENST00000556831 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms