RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 USP21Q9UK80 565 aa31.8■■■□□ 2.68
PABPN1-206ENST00000556809 BCL9LQ86UU0 1499 aa31.79■■■□□ 2.68
PABPN1-206ENST00000556809 PAK3O75914 559 aaPredicted RBP31.79■■■□□ 2.68
PABPN1-206ENST00000556809 RXRBP28702 533 aa31.78■■■□□ 2.68
PABPN1-206ENST00000556809 SLIT2O94813 1529 aa31.77■■■□□ 2.68
PABPN1-206ENST00000556809 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.75■■■□□ 2.67
PABPN1-206ENST00000556809 PLEKHG5O94827 1062 aa31.75■■■□□ 2.67
PABPN1-206ENST00000556809 CDK12Q9NYV4 1490 aaPredicted RBP31.74■■■□□ 2.67
PABPN1-206ENST00000556809 HAP1P54257 671 aaPredicted RBP31.74■■■□□ 2.67
PABPN1-206ENST00000556809 ATRNO75882 1429 aa31.74■■■□□ 2.67
PABPN1-206ENST00000556809 BRD4O60885 1362 aaPredicted RBP31.73■■■□□ 2.67
PABPN1-206ENST00000556809 ATAD2Q6PL18 1390 aa31.73■■■□□ 2.67
PABPN1-206ENST00000556809 TESK2Q96S53 571 aa31.73■■■□□ 2.67
PABPN1-206ENST00000556809 ST20-MTHFSA0A0A6YYL1 179 aa31.72■■■□□ 2.67
PABPN1-206ENST00000556809 RBM6P78332 1123 aaKnown RBP31.72■■■□□ 2.67
PABPN1-206ENST00000556809 TRPC5Q9UL62 973 aaPredicted RBP31.72■■■□□ 2.67
PABPN1-206ENST00000556809 USP6P35125 1406 aa31.72■■■□□ 2.67
PABPN1-206ENST00000556809 AKAP12Q02952 1782 aa31.71■■■□□ 2.67
PABPN1-206ENST00000556809 PLCH1Q4KWH8 1693 aa31.71■■■□□ 2.67
PABPN1-206ENST00000556809 SSH2Q76I76 1423 aa31.7■■■□□ 2.67
PABPN1-206ENST00000556809 PHRF1Q9P1Y6 1649 aaKnown RBP31.7■■■□□ 2.66
PABPN1-206ENST00000556809 NWD2Q9ULI1 1742 aa31.69■■■□□ 2.66
PABPN1-206ENST00000556809 USP47Q96K76 1375 aa31.68■■■□□ 2.66
PABPN1-206ENST00000556809 FAM83GA6ND36 823 aa31.68■■■□□ 2.66
PABPN1-206ENST00000556809 CPSF1Q10570 1443 aaKnown RBP31.67■■■□□ 2.66
PABPN1-206ENST00000556809 UNC5CLQ8IV45 518 aa31.67■■■□□ 2.66
PABPN1-206ENST00000556809 ABTB2Q8N961 1025 aa31.66■■■□□ 2.66
PABPN1-206ENST00000556809 PUS7Q96PZ0 661 aaKnown RBP31.66■■■□□ 2.66
PABPN1-206ENST00000556809 NUTM2GQ5VZR2 741 aa31.65■■■□□ 2.66
PABPN1-206ENST00000556809 COL14A1Q05707 1796 aaKnown RBP31.64■■■□□ 2.66
PABPN1-206ENST00000556809 ZNF692Q9BU19 519 aaPredicted RBP31.64■■■□□ 2.66
PABPN1-206ENST00000556809 RGS12O14924 1447 aa31.63■■■□□ 2.65
PABPN1-206ENST00000556809 USP19O94966 1318 aa31.62■■■□□ 2.65
PABPN1-206ENST00000556809 MON2Q7Z3U7 1717 aa31.61■■■□□ 2.65
PABPN1-206ENST00000556809 NRAPQ86VF7 1730 aa31.61■■■□□ 2.65
PABPN1-206ENST00000556809 NRKQ7Z2Y5 1582 aa31.61■■■□□ 2.65
PABPN1-206ENST00000556809 CD163L1Q9NR16 1453 aa31.61■■■□□ 2.65
PABPN1-206ENST00000556809 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
PABPN1-206ENST00000556809 PIK3C2AO00443 1686 aa31.6■■■□□ 2.65
PABPN1-206ENST00000556809 GJD4Q96KN9 370 aaPredicted RBP31.59■■■□□ 2.65
PABPN1-206ENST00000556809 NLRP13Q86W25 1043 aa31.58■■■□□ 2.65
PABPN1-206ENST00000556809 GLI3P10071 1580 aa31.58■■■□□ 2.65
PABPN1-206ENST00000556809 TTC21BQ7Z4L5 1316 aa31.57■■■□□ 2.64
PABPN1-206ENST00000556809 KIAA0232Q92628 1395 aa31.56■■■□□ 2.64
PABPN1-206ENST00000556809 VPS72Q15906 364 aa31.56■■■□□ 2.64
PABPN1-206ENST00000556809 SLC12A5Q9H2X9 1139 aa31.56■■■□□ 2.64
PABPN1-206ENST00000556809 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
PABPN1-206ENST00000556809 BTG4Q9NY30 223 aa31.55■■■□□ 2.64
PABPN1-206ENST00000556809 PRDM11Q9NQV5 511 aa31.54■■■□□ 2.64
PABPN1-206ENST00000556809 SLIT3O75094 1523 aa31.54■■■□□ 2.64
PABPN1-206ENST00000556809 TMC1Q8TDI8 760 aa31.53■■■□□ 2.64
PABPN1-206ENST00000556809 TTC21AQ8NDW8 1320 aa31.52■■■□□ 2.64
PABPN1-206ENST00000556809 GCP02774 474 aa31.52■■■□□ 2.64
PABPN1-206ENST00000556809 NLRP6P59044 892 aa31.52■■■□□ 2.64
PABPN1-206ENST00000556809 ZC3H6P61129 1189 aaKnown RBP31.52■■■□□ 2.64
PABPN1-206ENST00000556809 CPDO75976 1380 aa31.52■■■□□ 2.64
PABPN1-206ENST00000556809 EIF4G2P78344 907 aaKnown RBP eCLIP31.5■■■□□ 2.633e-7■■□□□ 12.5
PABPN1-206ENST00000556809 NINLQ9Y2I6 1382 aa31.49■■■□□ 2.63
PABPN1-206ENST00000556809 TMF1P82094 1093 aa31.49■■■□□ 2.63
PABPN1-206ENST00000556809 CHRNA2Q15822 529 aa31.48■■■□□ 2.63
PABPN1-206ENST00000556809 LMO7Q8WWI1 1683 aa31.48■■■□□ 2.63
PABPN1-206ENST00000556809 A0A1W2PP64 1363 aa31.47■■■□□ 2.63
PABPN1-206ENST00000556809 HDGFL2Q7Z4V5 671 aaPredicted RBP31.46■■■□□ 2.63
PABPN1-206ENST00000556809 USP54Q70EL1 1684 aa31.45■■■□□ 2.63
PABPN1-206ENST00000556809 TERF2IPQ9NYB0 399 aa31.45■■■□□ 2.63
PABPN1-206ENST00000556809 ONECUT3O60422 494 aaPredicted RBP31.44■■■□□ 2.62
PABPN1-206ENST00000556809 HSPA5P11021 654 aaKnown RBP31.44■■■□□ 2.62
PABPN1-206ENST00000556809 EDC4Q6P2E9 1401 aaKnown RBP31.43■■■□□ 2.62
PABPN1-206ENST00000556809 CAMTA1Q9Y6Y1 1673 aa31.43■■■□□ 2.62
PABPN1-206ENST00000556809 USP31Q70CQ4 1352 aa31.43■■■□□ 2.62
PABPN1-206ENST00000556809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.41■■■□□ 2.62
PABPN1-206ENST00000556809 UPF1Q92900 1129 aaKnown RBP eCLIP31.41■■■□□ 2.62
PABPN1-206ENST00000556809 CCDC9Q9Y3X0 531 aaKnown RBP31.4■■■□□ 2.62
PABPN1-206ENST00000556809 SPATA31A5Q5VU36 1347 aa31.4■■■□□ 2.62
PABPN1-206ENST00000556809 SPATA31A7Q8IWB4 1347 aa31.4■■■□□ 2.62
PABPN1-206ENST00000556809 COL18A1P39060 1754 aa31.39■■■□□ 2.62
PABPN1-206ENST00000556809 BRWD3Q6RI45 1802 aa31.39■■■□□ 2.62
PABPN1-206ENST00000556809 CDCA8Q53HL2 280 aa31.38■■■□□ 2.61
PABPN1-206ENST00000556809 ZRANB1Q9UGI0 708 aa31.38■■■□□ 2.61
PABPN1-206ENST00000556809 NME9Q86XW9 330 aa31.37■■■□□ 2.61
PABPN1-206ENST00000556809 NFAT5O94916 1531 aa31.37■■■□□ 2.61
PABPN1-206ENST00000556809 ANKRD36BQ8N2N9 1353 aa31.36■■■□□ 2.61
PABPN1-206ENST00000556809 KCNH5Q8NCM2 988 aa31.36■■■□□ 2.61
PABPN1-206ENST00000556809 AATKQ6ZMQ8 1374 aa31.35■■■□□ 2.61
PABPN1-206ENST00000556809 SEPT12Q8IYM1 358 aa31.35■■■□□ 2.61
PABPN1-206ENST00000556809 MYOM1P52179 1685 aa31.35■■■□□ 2.61
PABPN1-206ENST00000556809 ARHGEF25Q86VW2 580 aa31.34■■■□□ 2.61
PABPN1-206ENST00000556809 SPATA31A1Q5TZJ5 1347 aa31.33■■■□□ 2.61
PABPN1-206ENST00000556809 STRN4Q9NRL3 753 aa31.33■■■□□ 2.61
PABPN1-206ENST00000556809 COL5A2P05997 1499 aaPredicted RBP31.32■■■□□ 2.6
PABPN1-206ENST00000556809 OVOS2A0A0J9YW53 1432 aa31.31■■■□□ 2.6
PABPN1-206ENST00000556809 OVOS2Q6IE36 1432 aa31.31■■■□□ 2.6
PABPN1-206ENST00000556809 THSD7AQ9UPZ6 1657 aa31.3■■■□□ 2.6
PABPN1-206ENST00000556809 ZEB1P37275 1124 aaPredicted RBP31.3■■■□□ 2.6
PABPN1-206ENST00000556809 FAM98CQ17RN3 349 aaKnown RBP31.3■■■□□ 2.6
PABPN1-206ENST00000556809 EVA1CP58658 441 aa31.29■■■□□ 2.6
PABPN1-206ENST00000556809 LARP1Q6PKG0 1096 aaKnown RBP31.28■■■□□ 2.6
PABPN1-206ENST00000556809 RGPD5Q99666 1765 aa31.28■■■□□ 2.6
PABPN1-206ENST00000556809 SOX12O15370 315 aa31.27■■■□□ 2.6
PABPN1-206ENST00000556809 AXIN2Q9Y2T1 843 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms