RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
ACTN1-219ENST00000556432 DISP2A7MBM2 1401 aa20.7■□□□□ 0.9
ACTN1-219ENST00000556432 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
ACTN1-219ENST00000556432 TRIM37O94972 964 aa20.7■□□□□ 0.9
ACTN1-219ENST00000556432 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
ACTN1-219ENST00000556432 TNS1Q9HBL0 1735 aaKnown RBP20.69■□□□□ 0.9
ACTN1-219ENST00000556432 THSD7AQ9UPZ6 1657 aa20.68■□□□□ 0.9
ACTN1-219ENST00000556432 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
ACTN1-219ENST00000556432 MINK1Q8N4C8 1332 aaPredicted RBP20.68■□□□□ 0.9
ACTN1-219ENST00000556432 EIF3AQ14152 1382 aaKnown RBP20.68■□□□□ 0.9
ACTN1-219ENST00000556432 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
ACTN1-219ENST00000556432 DLC1Q96QB1 1528 aa20.67■□□□□ 0.9
ACTN1-219ENST00000556432 APBA3O96018 575 aa20.66■□□□□ 0.9
ACTN1-219ENST00000556432 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
ACTN1-219ENST00000556432 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
ACTN1-219ENST00000556432 TRAK1Q9UPV9 953 aa20.66■□□□□ 0.9
ACTN1-219ENST00000556432 YY1P25490 414 aa20.65■□□□□ 0.9
ACTN1-219ENST00000556432 CAMKK2Q96RR4 588 aa20.65■□□□□ 0.9
ACTN1-219ENST00000556432 SPATA31A1Q5TZJ5 1347 aa20.64■□□□□ 0.89
ACTN1-219ENST00000556432 PRR36Q9H6K5 1346 aa20.64■□□□□ 0.89
ACTN1-219ENST00000556432 CHRNA2Q15822 529 aa20.64■□□□□ 0.89
ACTN1-219ENST00000556432 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
ACTN1-219ENST00000556432 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
ACTN1-219ENST00000556432 PARD3Q8TEW0 1356 aa20.62■□□□□ 0.89
ACTN1-219ENST00000556432 KIAA0232Q92628 1395 aa20.62■□□□□ 0.89
ACTN1-219ENST00000556432 WASLO00401 505 aaPredicted RBP20.6■□□□□ 0.89
ACTN1-219ENST00000556432 PDE3BQ13370 1112 aa20.6■□□□□ 0.89
ACTN1-219ENST00000556432 NBPF8Q3BBV2 869 aa20.6■□□□□ 0.89
ACTN1-219ENST00000556432 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
ACTN1-219ENST00000556432 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
ACTN1-219ENST00000556432 CRYBG1Q9Y4K1 1723 aa20.6■□□□□ 0.89
ACTN1-219ENST00000556432 EVA1CP58658 441 aa20.59■□□□□ 0.89
ACTN1-219ENST00000556432 ZC3H6P61129 1189 aaKnown RBP20.59■□□□□ 0.89
ACTN1-219ENST00000556432 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
ACTN1-219ENST00000556432 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
ACTN1-219ENST00000556432 ADGRB1O14514 1584 aa20.57■□□□□ 0.88
ACTN1-219ENST00000556432 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
ACTN1-219ENST00000556432 SPON1Q9HCB6 807 aa20.54■□□□□ 0.88
ACTN1-219ENST00000556432 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
ACTN1-219ENST00000556432 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
ACTN1-219ENST00000556432 RREB1Q92766 1687 aa20.53■□□□□ 0.88
ACTN1-219ENST00000556432 NUP188Q5SRE5 1749 aa20.53■□□□□ 0.88
ACTN1-219ENST00000556432 ATP7BP35670 1465 aa20.52■□□□□ 0.88
ACTN1-219ENST00000556432 BARGINQ6ZT62 677 aa20.52■□□□□ 0.88
ACTN1-219ENST00000556432 NUDT16Q96DE0 195 aaKnown RBP20.52■□□□□ 0.88
ACTN1-219ENST00000556432 ITSN1Q15811 1721 aa20.52■□□□□ 0.88
ACTN1-219ENST00000556432 TCP11L2Q8N4U5 519 aa20.51■□□□□ 0.87
ACTN1-219ENST00000556432 LARP1Q6PKG0 1096 aaKnown RBP20.5■□□□□ 0.87
ACTN1-219ENST00000556432 KCNQ2O43526 872 aa20.49■□□□□ 0.87
ACTN1-219ENST00000556432 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
ACTN1-219ENST00000556432 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
ACTN1-219ENST00000556432 ABTB2Q8N961 1025 aa20.46■□□□□ 0.87
ACTN1-219ENST00000556432 ACEP12821 1306 aa20.45■□□□□ 0.86
ACTN1-219ENST00000556432 CAMTA1Q9Y6Y1 1673 aa20.45■□□□□ 0.86
ACTN1-219ENST00000556432 NRKQ7Z2Y5 1582 aa20.44■□□□□ 0.86
ACTN1-219ENST00000556432 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
ACTN1-219ENST00000556432 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
ACTN1-219ENST00000556432 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
ACTN1-219ENST00000556432 ARHGEF28Q8N1W1 1705 aaKnown RBP20.42■□□□□ 0.86
ACTN1-219ENST00000556432 POLR3AO14802 1390 aaPredicted RBP20.42■□□□□ 0.86
ACTN1-219ENST00000556432 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
ACTN1-219ENST00000556432 CPDO75976 1380 aa20.41■□□□□ 0.86
ACTN1-219ENST00000556432 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
ACTN1-219ENST00000556432 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
ACTN1-219ENST00000556432 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
ACTN1-219ENST00000556432 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
ACTN1-219ENST00000556432 LMO7Q8WWI1 1683 aa20.39■□□□□ 0.86
ACTN1-219ENST00000556432 USP19O94966 1318 aa20.38■□□□□ 0.85
ACTN1-219ENST00000556432 NLRP13Q86W25 1043 aa20.38■□□□□ 0.85
ACTN1-219ENST00000556432 PARP4Q9UKK3 1724 aaKnown RBP20.38■□□□□ 0.85
ACTN1-219ENST00000556432 TOPAZ1Q8N9V7 1692 aa20.38■□□□□ 0.85
ACTN1-219ENST00000556432 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-219ENST00000556432 GCP02774 474 aa20.37■□□□□ 0.85
ACTN1-219ENST00000556432 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
ACTN1-219ENST00000556432 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-219ENST00000556432 ANO8Q9HCE9 1232 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-219ENST00000556432 CRB1P82279 1406 aa20.36■□□□□ 0.85
ACTN1-219ENST00000556432 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
ACTN1-219ENST00000556432 PLEKHG3A1L390 1219 aa20.36■□□□□ 0.85
ACTN1-219ENST00000556432 ZBTB7AO95365 584 aa20.35■□□□□ 0.85
ACTN1-219ENST00000556432 DDB1Q16531 1140 aa20.35■□□□□ 0.85
ACTN1-219ENST00000556432 PLSCR1O15162 318 aa20.33■□□□□ 0.85
ACTN1-219ENST00000556432 SRPK2P78362 688 aaKnown RBP20.33■□□□□ 0.85
ACTN1-219ENST00000556432 TOM1L2Q6ZVM7 507 aa20.33■□□□□ 0.85
ACTN1-219ENST00000556432 RGPD3A6NKT7 1758 aaPredicted RBP20.32■□□□□ 0.84
ACTN1-219ENST00000556432 RGPD4Q7Z3J3 1758 aa20.32■□□□□ 0.84
ACTN1-219ENST00000556432 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
ACTN1-219ENST00000556432 PEAK1Q9H792 1746 aa20.31■□□□□ 0.84
ACTN1-219ENST00000556432 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
ACTN1-219ENST00000556432 PDGFDQ9GZP0 370 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-219ENST00000556432 ATF5Q9Y2D1 282 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-219ENST00000556432 PTF1AQ7RTS3 328 aa20.3■□□□□ 0.84
ACTN1-219ENST00000556432 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
ACTN1-219ENST00000556432 CASZ1Q86V15 1759 aa20.3■□□□□ 0.84
ACTN1-219ENST00000556432 NLRP6P59044 892 aa20.29■□□□□ 0.84
ACTN1-219ENST00000556432 SBF2Q86WG5 1849 aa20.28■□□□□ 0.84
ACTN1-219ENST00000556432 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
ACTN1-219ENST00000556432 AATKQ6ZMQ8 1374 aa20.28■□□□□ 0.84
ACTN1-219ENST00000556432 MYOM1P52179 1685 aa20.28■□□□□ 0.84
ACTN1-219ENST00000556432 CABP2Q9NPB3 220 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms