RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
HNRNPC-223ENST00000556142 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 MORC1Q86VD1 984 aa12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 MSH6P52701 1360 aa12.72□□□□□ -0.37
HNRNPC-223ENST00000556142 FYB1O15117 783 aa12.71□□□□□ -0.37
HNRNPC-223ENST00000556142 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-223ENST00000556142 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
HNRNPC-223ENST00000556142 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
HNRNPC-223ENST00000556142 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-223ENST00000556142 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
HNRNPC-223ENST00000556142 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-223ENST00000556142 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
HNRNPC-223ENST00000556142 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-223ENST00000556142 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
HNRNPC-223ENST00000556142 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
HNRNPC-223ENST00000556142 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
HNRNPC-223ENST00000556142 SMG6Q86US8 1419 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-223ENST00000556142 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
HNRNPC-223ENST00000556142 LRP6O75581 1613 aa12.67□□□□□ -0.38
HNRNPC-223ENST00000556142 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
HNRNPC-223ENST00000556142 COL16A1Q07092 1604 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-223ENST00000556142 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-223ENST00000556142 TOPAZ1Q8N9V7 1692 aa12.66□□□□□ -0.38
HNRNPC-223ENST00000556142 MTHFSP49914 203 aa12.65□□□□□ -0.38
HNRNPC-223ENST00000556142 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
HNRNPC-223ENST00000556142 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 RXRBP28702 533 aa12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-223ENST00000556142 SHPRHQ149N8 1683 aa12.63□□□□□ -0.39
HNRNPC-223ENST00000556142 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
HNRNPC-223ENST00000556142 AKAP12Q02952 1782 aa12.63□□□□□ -0.39
HNRNPC-223ENST00000556142 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
HNRNPC-223ENST00000556142 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-223ENST00000556142 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
HNRNPC-223ENST00000556142 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
HNRNPC-223ENST00000556142 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
HNRNPC-223ENST00000556142 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-223ENST00000556142 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-223ENST00000556142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.61□□□□□ -0.39
HNRNPC-223ENST00000556142 ACEP12821 1306 aa12.61□□□□□ -0.39
HNRNPC-223ENST00000556142 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
HNRNPC-223ENST00000556142 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 NME9Q86XW9 330 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 AHDC1Q5TGY3 1603 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-223ENST00000556142 USP6P35125 1406 aa12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 SALL2Q9Y467 1007 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-223ENST00000556142 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 FKBP8Q14318 412 aa12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
HNRNPC-223ENST00000556142 ATF3P18847 181 aa12.57□□□□□ -0.4
HNRNPC-223ENST00000556142 KCNA4P22459 653 aa12.57□□□□□ -0.4
HNRNPC-223ENST00000556142 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
HNRNPC-223ENST00000556142 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
HNRNPC-223ENST00000556142 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
HNRNPC-223ENST00000556142 AFF2P51816 1311 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 APAF1O14727 1248 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 FBLN1P23142 703 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 NALCNQ8IZF0 1738 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
HNRNPC-223ENST00000556142 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
HNRNPC-223ENST00000556142 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
HNRNPC-223ENST00000556142 ADGRL3Q9HAR2 1447 aa12.55□□□□□ -0.4
HNRNPC-223ENST00000556142 TRMT2AQ8IZ69 625 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-223ENST00000556142 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
HNRNPC-223ENST00000556142 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
HNRNPC-223ENST00000556142 COG3Q96JB2 828 aa12.54□□□□□ -0.4
HNRNPC-223ENST00000556142 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
HNRNPC-223ENST00000556142 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
HNRNPC-223ENST00000556142 BRINP3Q76B58 766 aa12.53□□□□□ -0.4
HNRNPC-223ENST00000556142 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-223ENST00000556142 RGS12O14924 1447 aa12.53□□□□□ -0.4
HNRNPC-223ENST00000556142 DIAPH1O60610 1272 aaKnown RBP12.52□□□□□ -0.4
HNRNPC-223ENST00000556142 NEFLP07196 543 aa12.52□□□□□ -0.4
HNRNPC-223ENST00000556142 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-223ENST00000556142 SLFN5Q08AF3 891 aa12.52□□□□□ -0.41
HNRNPC-223ENST00000556142 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
HNRNPC-223ENST00000556142 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms