RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ONECUT3O60422 494 aaPredicted RBP27.35■■□□□ 1.97
CDKN3-209ENST00000556102 BLMP54132 1417 aaPredicted RBP27.34■■□□□ 1.97
CDKN3-209ENST00000556102 PAK3O75914 559 aaPredicted RBP27.33■■□□□ 1.97
CDKN3-209ENST00000556102 BTG4Q9NY30 223 aa27.33■■□□□ 1.97
CDKN3-209ENST00000556102 TOPAZ1Q8N9V7 1692 aa27.33■■□□□ 1.97
CDKN3-209ENST00000556102 CDK19Q9BWU1 502 aa27.32■■□□□ 1.96
CDKN3-209ENST00000556102 ZRANB1Q9UGI0 708 aa27.31■■□□□ 1.96
CDKN3-209ENST00000556102 KRT27Q7Z3Y8 459 aa27.28■■□□□ 1.96
CDKN3-209ENST00000556102 POLR3AO14802 1390 aaPredicted RBP27.27■■□□□ 1.96
CDKN3-209ENST00000556102 NBPF1Q3BBV0 1214 aa27.27■■□□□ 1.96
CDKN3-209ENST00000556102 PHRF1Q9P1Y6 1649 aaKnown RBP27.27■■□□□ 1.96
CDKN3-209ENST00000556102 CCDC61Q9Y6R9 512 aa27.26■■□□□ 1.95
CDKN3-209ENST00000556102 A0A0G2JS52 829 aa27.25■■□□□ 1.95
CDKN3-209ENST00000556102 MYT1Q01538 1121 aa27.25■■□□□ 1.95
CDKN3-209ENST00000556102 PRDM11Q9NQV5 511 aa27.25■■□□□ 1.95
CDKN3-209ENST00000556102 ACEP12821 1306 aa27.24■■□□□ 1.95
CDKN3-209ENST00000556102 SF3B2Q13435 895 aaKnown RBP27.24■■□□□ 1.95
CDKN3-209ENST00000556102 FAM98CQ17RN3 349 aaKnown RBP27.24■■□□□ 1.95
CDKN3-209ENST00000556102 PLEKHG3A1L390 1219 aa27.23■■□□□ 1.95
CDKN3-209ENST00000556102 SRCAPQ6ZRS2 3230 aa27.22■■□□□ 1.95
CDKN3-209ENST00000556102 SPATA31A5Q5VU36 1347 aa27.22■■□□□ 1.95
CDKN3-209ENST00000556102 SPATA31A7Q8IWB4 1347 aa27.22■■□□□ 1.95
CDKN3-209ENST00000556102 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
CDKN3-209ENST00000556102 KIAA0232Q92628 1395 aa27.22■■□□□ 1.95
CDKN3-209ENST00000556102 CENPJQ9HC77 1338 aaPredicted RBP27.2■■□□□ 1.95
CDKN3-209ENST00000556102 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
CDKN3-209ENST00000556102 QRICH2Q9H0J4 1663 aa27.18■■□□□ 1.94
CDKN3-209ENST00000556102 THSD7AQ9UPZ6 1657 aa27.18■■□□□ 1.94
CDKN3-209ENST00000556102 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
CDKN3-209ENST00000556102 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
CDKN3-209ENST00000556102 CHRNA2Q15822 529 aa27.16■■□□□ 1.94
CDKN3-209ENST00000556102 PPIP5K1Q6PFW1 1433 aa27.16■■□□□ 1.94
CDKN3-209ENST00000556102 NRKQ7Z2Y5 1582 aa27.15■■□□□ 1.94
CDKN3-209ENST00000556102 ZC3H6P61129 1189 aaKnown RBP27.15■■□□□ 1.94
CDKN3-209ENST00000556102 L3MBTL2Q969R5 705 aa27.14■■□□□ 1.94
CDKN3-209ENST00000556102 ABTB2Q8N961 1025 aa27.13■■□□□ 1.93
CDKN3-209ENST00000556102 SPATA31A1Q5TZJ5 1347 aa27.13■■□□□ 1.93
CDKN3-209ENST00000556102 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
CDKN3-209ENST00000556102 RGPD1P0DJD0 1748 aa27.12■■□□□ 1.93
CDKN3-209ENST00000556102 USP19O94966 1318 aa27.12■■□□□ 1.93
CDKN3-209ENST00000556102 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
CDKN3-209ENST00000556102 BAG6P46379 1132 aa27.11■■□□□ 1.93
CDKN3-209ENST00000556102 STRN4Q9NRL3 753 aa27.11■■□□□ 1.93
CDKN3-209ENST00000556102 BRD4O60885 1362 aaPredicted RBP27.1■■□□□ 1.93
CDKN3-209ENST00000556102 CPDO75976 1380 aa27.09■■□□□ 1.93
CDKN3-209ENST00000556102 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
CDKN3-209ENST00000556102 LMO7Q8WWI1 1683 aa27.08■■□□□ 1.92
CDKN3-209ENST00000556102 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
CDKN3-209ENST00000556102 FAM182BQ5T319 152 aa27.07■■□□□ 1.92
CDKN3-209ENST00000556102 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
CDKN3-209ENST00000556102 CAMTA1Q9Y6Y1 1673 aa27.06■■□□□ 1.92
CDKN3-209ENST00000556102 EVA1CP58658 441 aa27.04■■□□□ 1.92
CDKN3-209ENST00000556102 CABP1Q9NZU7 370 aa27.04■■□□□ 1.92
CDKN3-209ENST00000556102 USP6P35125 1406 aa27.04■■□□□ 1.92
CDKN3-209ENST00000556102 TNS1Q9HBL0 1735 aaKnown RBP27.04■■□□□ 1.92
CDKN3-209ENST00000556102 EVC2Q86UK5 1308 aa27.02■■□□□ 1.92
CDKN3-209ENST00000556102 GCP02774 474 aa27.02■■□□□ 1.92
CDKN3-209ENST00000556102 ROCK2O75116 1388 aaKnown RBP27.01■■□□□ 1.91
CDKN3-209ENST00000556102 NEUROD1Q13562 356 aa27.01■■□□□ 1.91
CDKN3-209ENST00000556102 BARGINQ6ZT62 677 aa27.01■■□□□ 1.91
CDKN3-209ENST00000556102 USP35Q9P2H5 1018 aa27.01■■□□□ 1.91
CDKN3-209ENST00000556102 DISP2A7MBM2 1401 aa27■■□□□ 1.91
CDKN3-209ENST00000556102 EN1Q05925 392 aaPredicted RBP26.99■■□□□ 1.91
CDKN3-209ENST00000556102 LARP1Q6PKG0 1096 aaKnown RBP26.99■■□□□ 1.91
CDKN3-209ENST00000556102 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
CDKN3-209ENST00000556102 SLIT3O75094 1523 aa26.98■■□□□ 1.91
CDKN3-209ENST00000556102 NLRP6P59044 892 aa26.97■■□□□ 1.91
CDKN3-209ENST00000556102 TCP11L2Q8N4U5 519 aa26.97■■□□□ 1.91
CDKN3-209ENST00000556102 COL5A2P05997 1499 aaPredicted RBP26.97■■□□□ 1.91
CDKN3-209ENST00000556102 PIK3C2AO00443 1686 aa26.96■■□□□ 1.91
CDKN3-209ENST00000556102 LRP5O75197 1615 aa26.96■■□□□ 1.91
CDKN3-209ENST00000556102 THRAP3Q9Y2W1 955 aaKnown RBP26.94■■□□□ 1.9
CDKN3-209ENST00000556102 AKAP12Q02952 1782 aa26.94■■□□□ 1.9
CDKN3-209ENST00000556102 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
CDKN3-209ENST00000556102 PSDA5PKW4 1024 aaPredicted RBP26.92■■□□□ 1.9
CDKN3-209ENST00000556102 TRIM37O94972 964 aa26.92■■□□□ 1.9
CDKN3-209ENST00000556102 PARP4Q9UKK3 1724 aaKnown RBP26.92■■□□□ 1.9
CDKN3-209ENST00000556102 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
CDKN3-209ENST00000556102 ZNF692Q9BU19 519 aaPredicted RBP26.91■■□□□ 1.9
CDKN3-209ENST00000556102 CRB1P82279 1406 aa26.9■■□□□ 1.9
CDKN3-209ENST00000556102 ZBTB7CA1YPR0 619 aa26.9■■□□□ 1.9
CDKN3-209ENST00000556102 COL18A1P39060 1754 aa26.89■■□□□ 1.9
CDKN3-209ENST00000556102 EZH2Q15910 746 aaKnown RBP26.89■■□□□ 1.9
CDKN3-209ENST00000556102 TTC21BQ7Z4L5 1316 aa26.88■■□□□ 1.89
CDKN3-209ENST00000556102 CAMKK2Q96RR4 588 aa26.87■■□□□ 1.89
CDKN3-209ENST00000556102 PARD3Q8TEW0 1356 aa26.86■■□□□ 1.89
CDKN3-209ENST00000556102 APBA3O96018 575 aa26.86■■□□□ 1.89
CDKN3-209ENST00000556102 CPSF1Q10570 1443 aaKnown RBP26.86■■□□□ 1.89
CDKN3-209ENST00000556102 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
CDKN3-209ENST00000556102 TTC21AQ8NDW8 1320 aa26.85■■□□□ 1.89
CDKN3-209ENST00000556102 RREB1Q92766 1687 aa26.83■■□□□ 1.89
CDKN3-209ENST00000556102 MON2Q7Z3U7 1717 aa26.83■■□□□ 1.89
CDKN3-209ENST00000556102 R3HDM1Q15032 1099 aaKnown RBP26.83■■□□□ 1.89
CDKN3-209ENST00000556102 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
CDKN3-209ENST00000556102 KTN1Q86UP2 1357 aaKnown RBP26.82■■□□□ 1.88
CDKN3-209ENST00000556102 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
CDKN3-209ENST00000556102 LRRC37A3O60309 1634 aa26.81■■□□□ 1.88
CDKN3-209ENST00000556102 C11orf95C9JLR9 678 aaPredicted RBP26.81■■□□□ 1.88
CDKN3-209ENST00000556102 ARHGEF25Q86VW2 580 aa26.81■■□□□ 1.88
CDKN3-209ENST00000556102 CARD11Q9BXL7 1154 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms