RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GDF11O95390 407 aa9.97□□□□□ -0.81
SRP54-207ENST00000555535 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
SRP54-207ENST00000555535 FAM217BQ9NTX9 383 aaPredicted RBP9.97□□□□□ -0.81
SRP54-207ENST00000555535 UPP2O95045 317 aa9.96□□□□□ -0.82
SRP54-207ENST00000555535 GSK3AP49840 483 aa9.96□□□□□ -0.82
SRP54-207ENST00000555535 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
SRP54-207ENST00000555535 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
SRP54-207ENST00000555535 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
SRP54-207ENST00000555535 RASSF7Q02833 373 aa9.95□□□□□ -0.82
SRP54-207ENST00000555535 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
SRP54-207ENST00000555535 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
SRP54-207ENST00000555535 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
SRP54-207ENST00000555535 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
SRP54-207ENST00000555535 CDK15Q96Q40 435 aa9.93□□□□□ -0.82
SRP54-207ENST00000555535 NR5A1Q13285 461 aa9.92□□□□□ -0.82
SRP54-207ENST00000555535 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
SRP54-207ENST00000555535 ZIC2O95409 532 aaPredicted RBP9.91□□□□□ -0.82
SRP54-207ENST00000555535 SPTLC1O15269 473 aa9.9□□□□□ -0.82
SRP54-207ENST00000555535 IGHA1P01876 353 aa9.9□□□□□ -0.82
SRP54-207ENST00000555535 PRR7Q8TB68 274 aa9.9□□□□□ -0.82
SRP54-207ENST00000555535 BMP2P12643 396 aa9.89□□□□□ -0.83
SRP54-207ENST00000555535 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
SRP54-207ENST00000555535 MTMR2Q13614 643 aa9.88□□□□□ -0.83
SRP54-207ENST00000555535 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
SRP54-207ENST00000555535 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
SRP54-207ENST00000555535 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
SRP54-207ENST00000555535 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SRP54-207ENST00000555535 ITPKCQ96DU7 683 aa9.86□□□□□ -0.83
SRP54-207ENST00000555535 CTHP32929 405 aa9.85□□□□□ -0.83
SRP54-207ENST00000555535 FOXK2Q01167 660 aa9.85□□□□□ -0.83
SRP54-207ENST00000555535 ZFAND3Q9H8U3 227 aa9.85□□□□□ -0.83
SRP54-207ENST00000555535 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
SRP54-207ENST00000555535 SOS2Q07890 1332 aaPredicted RBP9.84□□□□□ -0.83
SRP54-207ENST00000555535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.84□□□□□ -0.832e-6■■□□□ 13.9
SRP54-207ENST00000555535 MEIOBQ8N635 442 aa9.84□□□□□ -0.83
SRP54-207ENST00000555535 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
SRP54-207ENST00000555535 GJA5P36382 358 aa9.83□□□□□ -0.84
SRP54-207ENST00000555535 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
SRP54-207ENST00000555535 TSEN34Q9BSV6 310 aaKnown RBP9.83□□□□□ -0.84
SRP54-207ENST00000555535 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
SRP54-207ENST00000555535 LYPD8Q6UX82 237 aa9.82□□□□□ -0.84
SRP54-207ENST00000555535 BPHLQ86WA6 291 aaPredicted RBP9.82□□□□□ -0.84
SRP54-207ENST00000555535 KANK3Q6NY19 840 aa9.81□□□□□ -0.84
SRP54-207ENST00000555535 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
SRP54-207ENST00000555535 DNMT3LQ9UJW3 386 aa9.81□□□□□ -0.84
SRP54-207ENST00000555535 NR3C2P08235 984 aa9.8□□□□□ -0.84
SRP54-207ENST00000555535 SSTR3P32745 418 aaPredicted RBP9.8□□□□□ -0.84
SRP54-207ENST00000555535 KRT76Q01546 638 aa9.8□□□□□ -0.84
SRP54-207ENST00000555535 AGERQ15109 404 aa9.8□□□□□ -0.84
SRP54-207ENST00000555535 SVOPQ8N4V2 548 aa9.8□□□□□ -0.84
SRP54-207ENST00000555535 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
SRP54-207ENST00000555535 NDUFV2P19404 249 aa9.79□□□□□ -0.84
SRP54-207ENST00000555535 GRM5P41594 1212 aa9.79□□□□□ -0.84
SRP54-207ENST00000555535 DIXDC1Q155Q3 683 aa9.79□□□□□ -0.84
SRP54-207ENST00000555535 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
SRP54-207ENST00000555535 GPAT2Q6NUI2 795 aa9.78□□□□□ -0.84
SRP54-207ENST00000555535 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
SRP54-207ENST00000555535 ZNF385CQ66K41 422 aaPredicted RBP9.77□□□□□ -0.85
SRP54-207ENST00000555535 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
SRP54-207ENST00000555535 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
SRP54-207ENST00000555535 MAP4K5Q9Y4K4 846 aa9.77□□□□□ -0.85
SRP54-207ENST00000555535 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
SRP54-207ENST00000555535 TTLL8A6PVC2 850 aa9.76□□□□□ -0.85
SRP54-207ENST00000555535 PTSQ03393 145 aa9.76□□□□□ -0.85
SRP54-207ENST00000555535 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
SRP54-207ENST00000555535 F12P00748 615 aaPredicted RBP9.75□□□□□ -0.85
SRP54-207ENST00000555535 SLURP2P0DP57 97 aa9.75□□□□□ -0.85
SRP54-207ENST00000555535 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
SRP54-207ENST00000555535 IRS1P35568 1242 aa9.74□□□□□ -0.85
SRP54-207ENST00000555535 FSHRP23945 695 aa9.72□□□□□ -0.85
SRP54-207ENST00000555535 CCDC155Q8N6L0 562 aa9.72□□□□□ -0.85
SRP54-207ENST00000555535 ARHGEF15O94989 841 aa9.71□□□□□ -0.86
SRP54-207ENST00000555535 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
SRP54-207ENST00000555535 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
SRP54-207ENST00000555535 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
SRP54-207ENST00000555535 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
SRP54-207ENST00000555535 MAP10Q9P2G4 905 aa9.71□□□□□ -0.86
SRP54-207ENST00000555535 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
SRP54-207ENST00000555535 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
SRP54-207ENST00000555535 VASH1Q7L8A9 365 aaPredicted RBP9.7□□□□□ -0.86
SRP54-207ENST00000555535 CCDC116Q8IYX3 515 aa9.7□□□□□ -0.86
SRP54-207ENST00000555535 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
SRP54-207ENST00000555535 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
SRP54-207ENST00000555535 SV2AQ7L0J3 742 aa9.69□□□□□ -0.86
SRP54-207ENST00000555535 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
SRP54-207ENST00000555535 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
SRP54-207ENST00000555535 RNFT1Q5M7Z0 435 aa9.68□□□□□ -0.86
SRP54-207ENST00000555535 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
SRP54-207ENST00000555535 SPINT1O43278 529 aa9.67□□□□□ -0.86
SRP54-207ENST00000555535 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
SRP54-207ENST00000555535 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
SRP54-207ENST00000555535 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
SRP54-207ENST00000555535 ITGA6P23229 1130 aa9.66□□□□□ -0.86
SRP54-207ENST00000555535 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
SRP54-207ENST00000555535 TBC1D2Q9BYX2 928 aa9.66□□□□□ -0.86
SRP54-207ENST00000555535 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
SRP54-207ENST00000555535 AMHR2Q16671 573 aa9.65□□□□□ -0.86
SRP54-207ENST00000555535 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
SRP54-207ENST00000555535 HRCP23327 699 aa9.64□□□□□ -0.87
SRP54-207ENST00000555535 Q6ZVU0 165 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms