RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
AC004828.1-201ENST00000555303 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
AC004828.1-201ENST00000555303 CDK19Q9BWU1 502 aa13□□□□□ -0.33
AC004828.1-201ENST00000555303 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
AC004828.1-201ENST00000555303 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
AC004828.1-201ENST00000555303 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
AC004828.1-201ENST00000555303 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
AC004828.1-201ENST00000555303 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 ACEP12821 1306 aa12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 L3MBTL2Q969R5 705 aa12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
AC004828.1-201ENST00000555303 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
AC004828.1-201ENST00000555303 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
AC004828.1-201ENST00000555303 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 CPDO75976 1380 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
AC004828.1-201ENST00000555303 USP19O94966 1318 aa12.93□□□□□ -0.34
AC004828.1-201ENST00000555303 AKAP12Q02952 1782 aa12.93□□□□□ -0.34
AC004828.1-201ENST00000555303 SPATA31A5Q5VU36 1347 aa12.92□□□□□ -0.34
AC004828.1-201ENST00000555303 SPATA31A7Q8IWB4 1347 aa12.92□□□□□ -0.34
AC004828.1-201ENST00000555303 USP6P35125 1406 aa12.92□□□□□ -0.34
AC004828.1-201ENST00000555303 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
AC004828.1-201ENST00000555303 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 ABTB2Q8N961 1025 aa12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 SLIT3O75094 1523 aa12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
AC004828.1-201ENST00000555303 A0A0G2JS52 829 aa12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 MYT1Q01538 1121 aa12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 FAM98CQ17RN3 349 aaKnown RBP12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
AC004828.1-201ENST00000555303 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
AC004828.1-201ENST00000555303 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
AC004828.1-201ENST00000555303 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 CAMTA1Q9Y6Y1 1673 aa12.88□□□□□ -0.35
AC004828.1-201ENST00000555303 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
AC004828.1-201ENST00000555303 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
AC004828.1-201ENST00000555303 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
AC004828.1-201ENST00000555303 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
AC004828.1-201ENST00000555303 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
AC004828.1-201ENST00000555303 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
AC004828.1-201ENST00000555303 ABCC6O95255 1503 aa12.86□□□□□ -0.35
AC004828.1-201ENST00000555303 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 GCP02774 474 aa12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 BAG6P46379 1132 aa12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
AC004828.1-201ENST00000555303 COL18A1P39060 1754 aa12.84□□□□□ -0.35
AC004828.1-201ENST00000555303 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
AC004828.1-201ENST00000555303 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
AC004828.1-201ENST00000555303 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
AC004828.1-201ENST00000555303 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
AC004828.1-201ENST00000555303 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
AC004828.1-201ENST00000555303 CRB1P82279 1406 aa12.83□□□□□ -0.36
AC004828.1-201ENST00000555303 EVA1CP58658 441 aa12.83□□□□□ -0.36
AC004828.1-201ENST00000555303 LRP5O75197 1615 aa12.83□□□□□ -0.36
AC004828.1-201ENST00000555303 NLRP6P59044 892 aa12.82□□□□□ -0.36
AC004828.1-201ENST00000555303 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
AC004828.1-201ENST00000555303 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
AC004828.1-201ENST00000555303 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
AC004828.1-201ENST00000555303 LRRC37A3O60309 1634 aa12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 NFAT5O94916 1531 aa12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
AC004828.1-201ENST00000555303 RREB1Q92766 1687 aa12.8□□□□□ -0.36
AC004828.1-201ENST00000555303 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
AC004828.1-201ENST00000555303 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
AC004828.1-201ENST00000555303 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
AC004828.1-201ENST00000555303 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
AC004828.1-201ENST00000555303 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
AC004828.1-201ENST00000555303 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
AC004828.1-201ENST00000555303 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 PUS7Q96PZ0 661 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms