RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
SCFD1-214ENST00000554819 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
SCFD1-214ENST00000554819 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
SCFD1-214ENST00000554819 ZC3H4Q9UPT8 1303 aaKnown RBP8.52□□□□□ -1.05
SCFD1-214ENST00000554819 ZNF511Q8NB15 262 aa8.5□□□□□ -1.05
SCFD1-214ENST00000554819 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
SCFD1-214ENST00000554819 GJD4Q96KN9 370 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-214ENST00000554819 TRIM34Q9BYJ4 488 aa8.5□□□□□ -1.05
SCFD1-214ENST00000554819 SH3BP2P78314 561 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 MCM6Q14566 821 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 PDXDC2PQ6P474 469 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
SCFD1-214ENST00000554819 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
SCFD1-214ENST00000554819 WNT7AO00755 349 aa8.47□□□□□ -1.05
SCFD1-214ENST00000554819 SKOR1P84550 965 aa8.47□□□□□ -1.05
SCFD1-214ENST00000554819 AGERQ15109 404 aa8.47□□□□□ -1.05
SCFD1-214ENST00000554819 VARSP26640 1264 aaKnown RBP8.46□□□□□ -1.06
SCFD1-214ENST00000554819 PTK2Q05397 1052 aa8.46□□□□□ -1.06
SCFD1-214ENST00000554819 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
SCFD1-214ENST00000554819 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
SCFD1-214ENST00000554819 FOXC1Q12948 553 aa8.45□□□□□ -1.06
SCFD1-214ENST00000554819 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
SCFD1-214ENST00000554819 RAD21O60216 631 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
SCFD1-214ENST00000554819 PRR20EP86478 221 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 PRR20CP86479 221 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 PRR20DP86480 221 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 PRR20BP86481 221 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 PRR20AP86496 221 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 FOXJ1Q92949 421 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 ARHGAP9Q9BRR9 750 aa8.44□□□□□ -1.06
SCFD1-214ENST00000554819 GDF9O60383 454 aa8.43□□□□□ -1.06
SCFD1-214ENST00000554819 SH3RF1Q7Z6J0 888 aa8.43□□□□□ -1.06
SCFD1-214ENST00000554819 MRGPRX2Q96LB1 330 aa8.43□□□□□ -1.06
SCFD1-214ENST00000554819 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
SCFD1-214ENST00000554819 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
SCFD1-214ENST00000554819 ZBTB33Q86T24 672 aa8.42□□□□□ -1.06
SCFD1-214ENST00000554819 WWC1Q8IX03 1113 aa8.42□□□□□ -1.06
SCFD1-214ENST00000554819 FAM174AQ8TBP5 190 aa8.42□□□□□ -1.06
SCFD1-214ENST00000554819 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
SCFD1-214ENST00000554819 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 CYP4X1Q8N118 509 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 GDPD2Q9HCC8 539 aa8.41□□□□□ -1.06
SCFD1-214ENST00000554819 TNFRSF10AO00220 468 aa8.4□□□□□ -1.06
SCFD1-214ENST00000554819 GFRA3O60609 400 aa8.4□□□□□ -1.06
SCFD1-214ENST00000554819 MPNDQ8N594 471 aa8.4□□□□□ -1.06
SCFD1-214ENST00000554819 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
SCFD1-214ENST00000554819 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-214ENST00000554819 COG6Q9Y2V7 657 aa8.4□□□□□ -1.06
SCFD1-214ENST00000554819 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-214ENST00000554819 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-214ENST00000554819 ABL2P42684 1182 aa8.39□□□□□ -1.07
SCFD1-214ENST00000554819 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
SCFD1-214ENST00000554819 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
SCFD1-214ENST00000554819 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
SCFD1-214ENST00000554819 SIAH2O43255 324 aa8.38□□□□□ -1.07
SCFD1-214ENST00000554819 NR1H3Q13133 447 aa8.38□□□□□ -1.07
SCFD1-214ENST00000554819 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
SCFD1-214ENST00000554819 NRG2O14511 850 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-214ENST00000554819 GPR37L1O60883 481 aa8.37□□□□□ -1.07
SCFD1-214ENST00000554819 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-214ENST00000554819 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
SCFD1-214ENST00000554819 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
SCFD1-214ENST00000554819 C1QTNF2Q9BXJ5 285 aa8.37□□□□□ -1.07
SCFD1-214ENST00000554819 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
SCFD1-214ENST00000554819 CDV3Q9UKY7 258 aaKnown RBP8.37□□□□□ -1.07
SCFD1-214ENST00000554819 FBXO45P0C2W1 286 aa8.36□□□□□ -1.07
SCFD1-214ENST00000554819 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
SCFD1-214ENST00000554819 POM121Q96HA1 1249 aa8.36□□□□□ -1.07
SCFD1-214ENST00000554819 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
SCFD1-214ENST00000554819 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
SCFD1-214ENST00000554819 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
SCFD1-214ENST00000554819 IRF5Q13568 498 aa8.35□□□□□ -1.07
SCFD1-214ENST00000554819 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
SCFD1-214ENST00000554819 DZIP3Q86Y13 1208 aaKnown RBP8.35□□□□□ -1.07
SCFD1-214ENST00000554819 SLC10A4Q96EP9 437 aa8.35□□□□□ -1.07
SCFD1-214ENST00000554819 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
SCFD1-214ENST00000554819 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCFD1-214ENST00000554819 MAP4K5Q9Y4K4 846 aa8.34□□□□□ -1.07
SCFD1-214ENST00000554819 A6NJR5 290 aa8.33□□□□□ -1.08
SCFD1-214ENST00000554819 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-214ENST00000554819 CLUAP1Q96AJ1 413 aa8.33□□□□□ -1.08
SCFD1-214ENST00000554819 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
SCFD1-214ENST00000554819 DGAT1O75907 488 aa8.32□□□□□ -1.08
SCFD1-214ENST00000554819 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
SCFD1-214ENST00000554819 ERICH6Q7L0X2 663 aa8.32□□□□□ -1.08
SCFD1-214ENST00000554819 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
SCFD1-214ENST00000554819 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 J3QL48 77 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 ADH1CP00326 375 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 SMPD1P17405 629 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 NR5A1Q13285 461 aa8.31□□□□□ -1.08
SCFD1-214ENST00000554819 PKDCCQ504Y2 493 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms