RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FAM98CQ17RN3 349 aaKnown RBP35.5■■■■□ 3.27
FOXA1-204ENST00000554607 ALS2Q96Q42 1657 aa35.49■■■■□ 3.27
FOXA1-204ENST00000554607 COL14A1Q05707 1796 aaKnown RBP35.48■■■■□ 3.27
FOXA1-204ENST00000554607 NRAPQ86VF7 1730 aa35.47■■■■□ 3.27
FOXA1-204ENST00000554607 BAG6P46379 1132 aa35.47■■■■□ 3.27
FOXA1-204ENST00000554607 PAK3O75914 559 aaPredicted RBP35.46■■■■□ 3.27
FOXA1-204ENST00000554607 SPATA31A5Q5VU36 1347 aa35.42■■■■□ 3.26
FOXA1-204ENST00000554607 SPATA31A7Q8IWB4 1347 aa35.42■■■■□ 3.26
FOXA1-204ENST00000554607 HRCP23327 699 aa35.41■■■■□ 3.26
FOXA1-204ENST00000554607 PRDM11Q9NQV5 511 aa35.41■■■■□ 3.26
FOXA1-204ENST00000554607 NUDT16Q96DE0 195 aaKnown RBP35.39■■■■□ 3.26
FOXA1-204ENST00000554607 ITSN1Q15811 1721 aa35.34■■■■□ 3.25
FOXA1-204ENST00000554607 CRYBG1Q9Y4K1 1723 aa35.33■■■■□ 3.25
FOXA1-204ENST00000554607 ATP7BP35670 1465 aa35.33■■■■□ 3.25
FOXA1-204ENST00000554607 ARHGEF28Q8N1W1 1705 aaKnown RBP35.32■■■■□ 3.24
FOXA1-204ENST00000554607 CDK19Q9BWU1 502 aa35.31■■■■□ 3.24
FOXA1-204ENST00000554607 KIAA0232Q92628 1395 aa35.29■■■■□ 3.24
FOXA1-204ENST00000554607 LRP5O75197 1615 aa35.28■■■■□ 3.24
FOXA1-204ENST00000554607 EN1Q05925 392 aaPredicted RBP35.28■■■■□ 3.24
FOXA1-204ENST00000554607 FAM182BQ5T319 152 aa35.28■■■■□ 3.24
FOXA1-204ENST00000554607 RGPD1P0DJD0 1748 aa35.28■■■■□ 3.24
FOXA1-204ENST00000554607 SPATA31A1Q5TZJ5 1347 aa35.28■■■■□ 3.24
FOXA1-204ENST00000554607 PSDA5PKW4 1024 aaPredicted RBP35.27■■■■□ 3.24
FOXA1-204ENST00000554607 THSD7AQ9UPZ6 1657 aa35.27■■■■□ 3.24
FOXA1-204ENST00000554607 CCDC61Q9Y6R9 512 aa35.26■■■■□ 3.24
FOXA1-204ENST00000554607 CHRNA2Q15822 529 aa35.25■■■■□ 3.23
FOXA1-204ENST00000554607 STRN4Q9NRL3 753 aa35.24■■■■□ 3.23
FOXA1-204ENST00000554607 POLR3AO14802 1390 aaPredicted RBP35.24■■■■□ 3.23
FOXA1-204ENST00000554607 ZC3H6P61129 1189 aaKnown RBP35.23■■■■□ 3.23
FOXA1-204ENST00000554607 NBPF8Q3BBV2 869 aa35.23■■■■□ 3.23
FOXA1-204ENST00000554607 ACEP12821 1306 aa35.23■■■■□ 3.23
FOXA1-204ENST00000554607 DISP2A7MBM2 1401 aa35.22■■■■□ 3.23
FOXA1-204ENST00000554607 PLEKHG3A1L390 1219 aa35.21■■■■□ 3.23
FOXA1-204ENST00000554607 NUTM2GQ5VZR2 741 aa35.21■■■■□ 3.23
FOXA1-204ENST00000554607 FAM196AQ6ZSG2 479 aa35.21■■■■□ 3.23
FOXA1-204ENST00000554607 EVA1CP58658 441 aa35.2■■■■□ 3.23
FOXA1-204ENST00000554607 PHRF1Q9P1Y6 1649 aaKnown RBP35.2■■■■□ 3.23
FOXA1-204ENST00000554607 ABTB2Q8N961 1025 aa35.17■■■■□ 3.22
FOXA1-204ENST00000554607 KIAA1210Q9ULL0 1709 aa35.16■■■■□ 3.22
FOXA1-204ENST00000554607 BARGINQ6ZT62 677 aa35.15■■■■□ 3.22
FOXA1-204ENST00000554607 TOPAZ1Q8N9V7 1692 aa35.14■■■■□ 3.22
FOXA1-204ENST00000554607 TRIM37O94972 964 aa35.13■■■■□ 3.21
FOXA1-204ENST00000554607 R3HDM1Q15032 1099 aaKnown RBP35.13■■■■□ 3.21
FOXA1-204ENST00000554607 USP35Q9P2H5 1018 aa35.13■■■■□ 3.21
FOXA1-204ENST00000554607 TNS1Q9HBL0 1735 aaKnown RBP35.12■■■■□ 3.21
FOXA1-204ENST00000554607 EZH2Q15910 746 aaKnown RBP35.12■■■■□ 3.21
FOXA1-204ENST00000554607 PDE3BQ13370 1112 aa35.11■■■■□ 3.21
FOXA1-204ENST00000554607 SSH2Q76I76 1423 aa35.11■■■■□ 3.21
FOXA1-204ENST00000554607 CAMKK2Q96RR4 588 aa35.1■■■■□ 3.21
FOXA1-204ENST00000554607 CPDO75976 1380 aa35.1■■■■□ 3.21
FOXA1-204ENST00000554607 NLRP13Q86W25 1043 aa35.09■■■■□ 3.21
FOXA1-204ENST00000554607 APBA3O96018 575 aa35.08■■■■□ 3.21
FOXA1-204ENST00000554607 SRPK2P78362 688 aaKnown RBP35.08■■■■□ 3.21
FOXA1-204ENST00000554607 NBPF1Q3BBV0 1214 aa35.08■■■■□ 3.21
FOXA1-204ENST00000554607 PARD3Q8TEW0 1356 aa35.08■■■■□ 3.21
FOXA1-204ENST00000554607 USP19O94966 1318 aa35.07■■■■□ 3.21
FOXA1-204ENST00000554607 TCP11L2Q8N4U5 519 aa35.07■■■■□ 3.2
FOXA1-204ENST00000554607 LARP1Q6PKG0 1096 aaKnown RBP35.06■■■■□ 3.2
FOXA1-204ENST00000554607 CAMTA1Q9Y6Y1 1673 aa35.05■■■■□ 3.2
FOXA1-204ENST00000554607 NRKQ7Z2Y5 1582 aa35.05■■■■□ 3.2
FOXA1-204ENST00000554607 THRAP3Q9Y2W1 955 aaKnown RBP35.05■■■■□ 3.2
FOXA1-204ENST00000554607 BRD4O60885 1362 aaPredicted RBP35.04■■■■□ 3.2
FOXA1-204ENST00000554607 PPIP5K1Q6PFW1 1433 aa35.04■■■■□ 3.2
FOXA1-204ENST00000554607 CENPJQ9HC77 1338 aaPredicted RBP35.04■■■■□ 3.2
FOXA1-204ENST00000554607 GCP02774 474 aa35.03■■■■□ 3.2
FOXA1-204ENST00000554607 LMO7Q8WWI1 1683 aa34.99■■■■□ 3.19
FOXA1-204ENST00000554607 CABP2Q9NPB3 220 aa34.99■■■■□ 3.19
FOXA1-204ENST00000554607 C11orf95C9JLR9 678 aaPredicted RBP34.97■■■■□ 3.19
FOXA1-204ENST00000554607 NBPF14Q5TI25 921 aa34.94■■■■□ 3.18
FOXA1-204ENST00000554607 COL5A2P05997 1499 aaPredicted RBP34.92■■■■□ 3.18
FOXA1-204ENST00000554607 CABP1Q9NZU7 370 aa34.92■■■■□ 3.18
FOXA1-204ENST00000554607 NLRP6P59044 892 aa34.91■■■■□ 3.18
FOXA1-204ENST00000554607 CRB1P82279 1406 aa34.89■■■■□ 3.18
FOXA1-204ENST00000554607 USP6P35125 1406 aa34.89■■■■□ 3.18
FOXA1-204ENST00000554607 AATKQ6ZMQ8 1374 aa34.87■■■■□ 3.17
FOXA1-204ENST00000554607 RREB1Q92766 1687 aa34.87■■■■□ 3.17
FOXA1-204ENST00000554607 ZBTB7CA1YPR0 619 aa34.87■■■■□ 3.17
FOXA1-204ENST00000554607 PARP4Q9UKK3 1724 aaKnown RBP34.86■■■■□ 3.17
FOXA1-204ENST00000554607 QRICH2Q9H0J4 1663 aa34.86■■■■□ 3.17
FOXA1-204ENST00000554607 EVC2Q86UK5 1308 aa34.84■■■■□ 3.17
FOXA1-204ENST00000554607 NUP188Q5SRE5 1749 aa34.82■■■■□ 3.16
FOXA1-204ENST00000554607 SLIT3O75094 1523 aa34.81■■■■□ 3.16
FOXA1-204ENST00000554607 OVOS2A0A0G2JMS6 1433 aa34.81■■■■□ 3.16
FOXA1-204ENST00000554607 OVOS2A0A0J9YW53 1432 aa34.81■■■■□ 3.16
FOXA1-204ENST00000554607 OVOS2Q6IE36 1432 aa34.81■■■■□ 3.16
FOXA1-204ENST00000554607 DDB1Q16531 1140 aa34.8■■■■□ 3.16
FOXA1-204ENST00000554607 TOM1L2Q6ZVM7 507 aa34.8■■■■□ 3.16
FOXA1-204ENST00000554607 L3MBTL2Q969R5 705 aa34.8■■■■□ 3.16
FOXA1-204ENST00000554607 ZNF692Q9BU19 519 aaPredicted RBP34.79■■■■□ 3.16
FOXA1-204ENST00000554607 PLSCR1O15162 318 aa34.75■■■■□ 3.15
FOXA1-204ENST00000554607 KCNH5Q8NCM2 988 aa34.75■■■■□ 3.15
FOXA1-204ENST00000554607 CDCA7Q9BWT1 371 aaPredicted RBP34.75■■■■□ 3.15
FOXA1-204ENST00000554607 SPON1Q9HCB6 807 aa34.74■■■■□ 3.15
FOXA1-204ENST00000554607 WDR17Q8IZU2 1322 aa34.74■■■■□ 3.15
FOXA1-204ENST00000554607 AXIN2Q9Y2T1 843 aa34.72■■■■□ 3.15
FOXA1-204ENST00000554607 PIK3C2AO00443 1686 aa34.72■■■■□ 3.15
FOXA1-204ENST00000554607 PEAK1Q9H792 1746 aa34.72■■■■□ 3.15
FOXA1-204ENST00000554607 ARHGEF25Q86VW2 580 aa34.71■■■■□ 3.15
FOXA1-204ENST00000554607 TTC21BQ7Z4L5 1316 aa34.71■■■■□ 3.15
FOXA1-204ENST00000554607 COL18A1P39060 1754 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms