RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
PNN-203ENST00000554117 SF3B2Q13435 895 aaKnown RBP15.45■□□□□ 0.06
PNN-203ENST00000554117 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
PNN-203ENST00000554117 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
PNN-203ENST00000554117 AKAP12Q02952 1782 aa15.42■□□□□ 0.06
PNN-203ENST00000554117 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
PNN-203ENST00000554117 VPS72Q15906 364 aa15.42■□□□□ 0.06
PNN-203ENST00000554117 CDK19Q9BWU1 502 aa15.42■□□□□ 0.06
PNN-203ENST00000554117 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
PNN-203ENST00000554117 PRR36Q9H6K5 1346 aa15.41■□□□□ 0.06
PNN-203ENST00000554117 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
PNN-203ENST00000554117 PRDM11Q9NQV5 511 aa15.39■□□□□ 0.05
PNN-203ENST00000554117 BTG4Q9NY30 223 aa15.39■□□□□ 0.05
PNN-203ENST00000554117 PPIP5K1Q6PFW1 1433 aa15.37■□□□□ 0.05
PNN-203ENST00000554117 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
PNN-203ENST00000554117 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
PNN-203ENST00000554117 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
PNN-203ENST00000554117 FAM83GA6ND36 823 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 SEPT12Q8IYM1 358 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 ACEP12821 1306 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
PNN-203ENST00000554117 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
PNN-203ENST00000554117 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
PNN-203ENST00000554117 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
PNN-203ENST00000554117 NBPF1Q3BBV0 1214 aa15.35■□□□□ 0.05
PNN-203ENST00000554117 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
PNN-203ENST00000554117 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
PNN-203ENST00000554117 EVA1CP58658 441 aa15.34■□□□□ 0.05
PNN-203ENST00000554117 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
PNN-203ENST00000554117 NLRP13Q86W25 1043 aa15.34■□□□□ 0.05
PNN-203ENST00000554117 L3MBTL2Q969R5 705 aa15.34■□□□□ 0.05
PNN-203ENST00000554117 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
PNN-203ENST00000554117 EP400Q96L91 3159 aa15.33■□□□□ 0.04
PNN-203ENST00000554117 MON2Q7Z3U7 1717 aa15.33■□□□□ 0.04
PNN-203ENST00000554117 THSD7AQ9UPZ6 1657 aa15.32■□□□□ 0.04
PNN-203ENST00000554117 PLEKHG3A1L390 1219 aa15.32■□□□□ 0.04
PNN-203ENST00000554117 FAM98CQ17RN3 349 aaKnown RBP15.32■□□□□ 0.04
PNN-203ENST00000554117 TNS1Q9HBL0 1735 aaKnown RBP15.31■□□□□ 0.04
PNN-203ENST00000554117 LTN1O94822 1766 aa15.31■□□□□ 0.04
PNN-203ENST00000554117 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
PNN-203ENST00000554117 KIAA0232Q92628 1395 aa15.31■□□□□ 0.04
PNN-203ENST00000554117 TONSLQ96HA7 1378 aa15.31■□□□□ 0.04
PNN-203ENST00000554117 PIK3C2AO00443 1686 aa15.3■□□□□ 0.04
PNN-203ENST00000554117 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
PNN-203ENST00000554117 BAG6P46379 1132 aa15.3■□□□□ 0.04
PNN-203ENST00000554117 ZC3H6P61129 1189 aaKnown RBP15.3■□□□□ 0.04
PNN-203ENST00000554117 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
PNN-203ENST00000554117 SIN3AQ96ST3 1273 aa15.3■□□□□ 0.04
PNN-203ENST00000554117 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
PNN-203ENST00000554117 PARP4Q9UKK3 1724 aaKnown RBP15.3■□□□□ 0.04
PNN-203ENST00000554117 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
PNN-203ENST00000554117 KAT6BQ8WYB5 2073 aa15.28■□□□□ 0.04
PNN-203ENST00000554117 SPATA31A5Q5VU36 1347 aa15.28■□□□□ 0.04
PNN-203ENST00000554117 SPATA31A7Q8IWB4 1347 aa15.28■□□□□ 0.04
PNN-203ENST00000554117 SBF2Q86WG5 1849 aa15.27■□□□□ 0.04
PNN-203ENST00000554117 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
PNN-203ENST00000554117 USP6P35125 1406 aa15.26■□□□□ 0.03
PNN-203ENST00000554117 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
PNN-203ENST00000554117 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
PNN-203ENST00000554117 NLRP6P59044 892 aa15.25■□□□□ 0.03
PNN-203ENST00000554117 CABP1Q9NZU7 370 aa15.25■□□□□ 0.03
PNN-203ENST00000554117 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
PNN-203ENST00000554117 CPDO75976 1380 aa15.24■□□□□ 0.03
PNN-203ENST00000554117 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
PNN-203ENST00000554117 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
PNN-203ENST00000554117 SSH2Q76I76 1423 aa15.24■□□□□ 0.03
PNN-203ENST00000554117 SLIT3O75094 1523 aa15.23■□□□□ 0.03
PNN-203ENST00000554117 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
PNN-203ENST00000554117 USP54Q70EL1 1684 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 CAMTA1Q9Y6Y1 1673 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 USP19O94966 1318 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 COL18A1P39060 1754 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
PNN-203ENST00000554117 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 GCP02774 474 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
PNN-203ENST00000554117 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
PNN-203ENST00000554117 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
PNN-203ENST00000554117 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
PNN-203ENST00000554117 KTN1Q86UP2 1357 aaKnown RBP15.21■□□□□ 0.02
PNN-203ENST00000554117 RREB1Q92766 1687 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 FAM208AQ9UK61 1670 aaKnown RBP15.2■□□□□ 0.02
PNN-203ENST00000554117 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
PNN-203ENST00000554117 DEFB132Q7Z7B7 95 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
PNN-203ENST00000554117 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 LRP5O75197 1615 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
PNN-203ENST00000554117 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
PNN-203ENST00000554117 CRB1P82279 1406 aa15.19■□□□□ 0.02
PNN-203ENST00000554117 LRRC37A3O60309 1634 aa15.19■□□□□ 0.02
PNN-203ENST00000554117 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
PNN-203ENST00000554117 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
PNN-203ENST00000554117 ABCC6O95255 1503 aa15.17■□□□□ 0.02
PNN-203ENST00000554117 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
PNN-203ENST00000554117 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
PNN-203ENST00000554117 TMC1Q8TDI8 760 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms