RNA–Protein interactions for RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 ABCA3Q99758 1704 aa41.11■■■■■ 4.17
LINC01578-201ENST00000553829 PLEKHG5O94827 1062 aa41.1■■■■■ 4.17
LINC01578-201ENST00000553829 CABP1Q9NZU7 370 aa41.1■■■■■ 4.17
LINC01578-201ENST00000553829 RBM6P78332 1123 aaKnown RBP41.06■■■■■ 4.16
LINC01578-201ENST00000553829 CCER1Q8TC90 406 aaPredicted RBP41.05■■■■■ 4.16
LINC01578-201ENST00000553829 TRPC5Q9UL62 973 aaPredicted RBP41.05■■■■■ 4.16
LINC01578-201ENST00000553829 BCL9LQ86UU0 1499 aa41.03■■■■■ 4.16
LINC01578-201ENST00000553829 SLIT2O94813 1529 aa41■■■■■ 4.15
LINC01578-201ENST00000553829 CDK12Q9NYV4 1490 aaPredicted RBP41■■■■■ 4.15
LINC01578-201ENST00000553829 CRYBG1Q9Y4K1 1723 aa40.99■■■■■ 4.15
LINC01578-201ENST00000553829 BRD4O60885 1362 aaPredicted RBP40.99■■■■■ 4.15
LINC01578-201ENST00000553829 ATRNO75882 1429 aa40.98■■■■■ 4.15
LINC01578-201ENST00000553829 ATAD2Q6PL18 1390 aa40.98■■■■■ 4.15
LINC01578-201ENST00000553829 TNKS1BP1Q9C0C2 1729 aaKnown RBP40.96■■■■■ 4.15
LINC01578-201ENST00000553829 UNC5CLQ8IV45 518 aa40.96■■■■■ 4.15
LINC01578-201ENST00000553829 ST20-MTHFSA0A0A6YYL1 179 aa40.95■■■■■ 4.15
LINC01578-201ENST00000553829 FAM83GA6ND36 823 aa40.95■■■■■ 4.15
LINC01578-201ENST00000553829 ABTB2Q8N961 1025 aa40.95■■■■■ 4.15
LINC01578-201ENST00000553829 ZNF692Q9BU19 519 aaPredicted RBP40.93■■■■■ 4.14
LINC01578-201ENST00000553829 USP6P35125 1406 aa40.93■■■■■ 4.14
LINC01578-201ENST00000553829 NUTM2GQ5VZR2 741 aa40.92■■■■■ 4.14
LINC01578-201ENST00000553829 NWD2Q9ULI1 1742 aa40.91■■■■■ 4.14
LINC01578-201ENST00000553829 TESK2Q96S53 571 aa40.91■■■■■ 4.14
LINC01578-201ENST00000553829 SLC24A1O60721 1099 aa40.9■■■■■ 4.14
LINC01578-201ENST00000553829 PUS7Q96PZ0 661 aaKnown RBP40.9■■■■■ 4.14
LINC01578-201ENST00000553829 PLCH1Q4KWH8 1693 aa40.9■■■■■ 4.14
LINC01578-201ENST00000553829 AKAP12Q02952 1782 aa40.89■■■■■ 4.14
LINC01578-201ENST00000553829 GJD4Q96KN9 370 aaPredicted RBP40.87■■■■■ 4.13
LINC01578-201ENST00000553829 PHRF1Q9P1Y6 1649 aaKnown RBP40.86■■■■■ 4.13
LINC01578-201ENST00000553829 SSH2Q76I76 1423 aa40.86■■■■■ 4.13
LINC01578-201ENST00000553829 NLRP13Q86W25 1043 aa40.86■■■■■ 4.13
LINC01578-201ENST00000553829 COL14A1Q05707 1796 aaKnown RBP40.84■■■■■ 4.13
LINC01578-201ENST00000553829 CPSF1Q10570 1443 aaKnown RBP40.84■■■■■ 4.13
LINC01578-201ENST00000553829 USP47Q96K76 1375 aa40.83■■■■■ 4.13
LINC01578-201ENST00000553829 RGS12O14924 1447 aa40.83■■■■■ 4.13
LINC01578-201ENST00000553829 USP19O94966 1318 aa40.8■■■■■ 4.12
LINC01578-201ENST00000553829 VPS72Q15906 364 aa40.79■■■■■ 4.12
LINC01578-201ENST00000553829 PRDM11Q9NQV5 511 aa40.79■■■■■ 4.12
LINC01578-201ENST00000553829 BTG4Q9NY30 223 aa40.79■■■■■ 4.12
LINC01578-201ENST00000553829 TTC21BQ7Z4L5 1316 aa40.78■■■■■ 4.12
LINC01578-201ENST00000553829 ZC3H6P61129 1189 aaKnown RBP40.77■■■■■ 4.12
LINC01578-201ENST00000553829 TMC1Q8TDI8 760 aa40.77■■■■■ 4.12
LINC01578-201ENST00000553829 KTN1Q86UP2 1357 aaKnown RBP40.76■■■■■ 4.12
LINC01578-201ENST00000553829 KIAA0232Q92628 1395 aa40.76■■■■■ 4.12
LINC01578-201ENST00000553829 NLRP6P59044 892 aa40.76■■■■■ 4.12
LINC01578-201ENST00000553829 SLC12A5Q9H2X9 1139 aa40.76■■■■■ 4.12
LINC01578-201ENST00000553829 NRAPQ86VF7 1730 aa40.75■■■■■ 4.11
LINC01578-201ENST00000553829 MON2Q7Z3U7 1717 aa40.74■■■■■ 4.11
LINC01578-201ENST00000553829 GLI3P10071 1580 aa40.74■■■■■ 4.11
LINC01578-201ENST00000553829 GCP02774 474 aa40.73■■■■■ 4.11
LINC01578-201ENST00000553829 PIK3C2AO00443 1686 aa40.72■■■■■ 4.11
LINC01578-201ENST00000553829 TTC21AQ8NDW8 1320 aa40.72■■■■■ 4.11
LINC01578-201ENST00000553829 NRKQ7Z2Y5 1582 aa40.72■■■■■ 4.11
LINC01578-201ENST00000553829 CD163L1Q9NR16 1453 aa40.71■■■■■ 4.11
LINC01578-201ENST00000553829 CHRNA2Q15822 529 aa40.7■■■■■ 4.11
LINC01578-201ENST00000553829 TMF1P82094 1093 aa40.69■■■■■ 4.1
LINC01578-201ENST00000553829 HDGFL2Q7Z4V5 671 aaPredicted RBP40.69■■■■■ 4.1
LINC01578-201ENST00000553829 CCDC9Q9Y3X0 531 aaKnown RBP40.68■■■■■ 4.1
LINC01578-201ENST00000553829 CPDO75976 1380 aa40.68■■■■■ 4.1
LINC01578-201ENST00000553829 TERF2IPQ9NYB0 399 aa40.67■■■■■ 4.1
LINC01578-201ENST00000553829 NINLQ9Y2I6 1382 aa40.64■■■■■ 4.1
LINC01578-201ENST00000553829 SLIT3O75094 1523 aa40.64■■■■■ 4.1
LINC01578-201ENST00000553829 UPF1Q92900 1129 aaKnown RBP eCLIP40.64■■■■■ 4.12e-7■■■■■ 44.5
LINC01578-201ENST00000553829 ONECUT3O60422 494 aaPredicted RBP40.63■■■■■ 4.09
LINC01578-201ENST00000553829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.59■■■■■ 4.09
LINC01578-201ENST00000553829 A0A1W2PP64 1363 aa40.59■■■■■ 4.09
LINC01578-201ENST00000553829 CDCA8Q53HL2 280 aa40.58■■■■■ 4.09
LINC01578-201ENST00000553829 SPATA31A5Q5VU36 1347 aa40.57■■■■■ 4.08
LINC01578-201ENST00000553829 SPATA31A7Q8IWB4 1347 aa40.57■■■■■ 4.08
LINC01578-201ENST00000553829 EDC4Q6P2E9 1401 aaKnown RBP40.57■■■■■ 4.08
LINC01578-201ENST00000553829 KCNH5Q8NCM2 988 aa40.56■■■■■ 4.08
LINC01578-201ENST00000553829 LMO7Q8WWI1 1683 aa40.56■■■■■ 4.08
LINC01578-201ENST00000553829 CAMTA1Q9Y6Y1 1673 aa40.56■■■■■ 4.08
LINC01578-201ENST00000553829 BRWD3Q6RI45 1802 aa40.55■■■■■ 4.08
LINC01578-201ENST00000553829 USP31Q70CQ4 1352 aa40.54■■■■■ 4.08
LINC01578-201ENST00000553829 SEPT12Q8IYM1 358 aa40.54■■■■■ 4.08
LINC01578-201ENST00000553829 EVA1CP58658 441 aa40.53■■■■■ 4.08
LINC01578-201ENST00000553829 STRN4Q9NRL3 753 aa40.53■■■■■ 4.08
LINC01578-201ENST00000553829 ZRANB1Q9UGI0 708 aa40.52■■■■■ 4.08
LINC01578-201ENST00000553829 NME9Q86XW9 330 aa40.51■■■■■ 4.08
LINC01578-201ENST00000553829 USP54Q70EL1 1684 aa40.5■■■■■ 4.07
LINC01578-201ENST00000553829 AATKQ6ZMQ8 1374 aa40.49■■■■■ 4.07
LINC01578-201ENST00000553829 FAM98CQ17RN3 349 aaKnown RBP40.49■■■■■ 4.07
LINC01578-201ENST00000553829 SPATA31A1Q5TZJ5 1347 aa40.48■■■■■ 4.07
LINC01578-201ENST00000553829 EIF4G2P78344 907 aaKnown RBP eCLIP40.48■■■■■ 4.07
LINC01578-201ENST00000553829 ARHGEF25Q86VW2 580 aa40.48■■■■■ 4.07
LINC01578-201ENST00000553829 ZBTB7CA1YPR0 619 aa40.47■■■■■ 4.07
LINC01578-201ENST00000553829 COL18A1P39060 1754 aa40.47■■■■■ 4.07
LINC01578-201ENST00000553829 ANKRD36BQ8N2N9 1353 aa40.46■■■■■ 4.07
LINC01578-201ENST00000553829 EP400Q96L91 3159 aa40.45■■■■■ 4.07
LINC01578-201ENST00000553829 SOX12O15370 315 aa40.43■■■■■ 4.06
LINC01578-201ENST00000553829 NFAT5O94916 1531 aa40.42■■■■■ 4.06
LINC01578-201ENST00000553829 LARP1Q6PKG0 1096 aaKnown RBP40.42■■■■■ 4.06
LINC01578-201ENST00000553829 HSPA5P11021 654 aaKnown RBP40.41■■■■■ 4.06
LINC01578-201ENST00000553829 COL5A2P05997 1499 aaPredicted RBP40.4■■■■■ 4.06
LINC01578-201ENST00000553829 A0A0G2JS52 829 aa40.39■■■■■ 4.06
LINC01578-201ENST00000553829 MYT1Q01538 1121 aa40.39■■■■■ 4.06
LINC01578-201ENST00000553829 AXIN2Q9Y2T1 843 aa40.39■■■■■ 4.06
LINC01578-201ENST00000553829 RGPD5Q99666 1765 aa40.38■■■■■ 4.06
LINC01578-201ENST00000553829 KRT27Q7Z3Y8 459 aa40.38■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms