RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-202ENST00000553656 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-202ENST00000553656 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-202ENST00000553656 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-202ENST00000553656 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
TUBB3-202ENST00000553656 ANKRD36BQ8N2N9 1353 aa19.18■□□□□ 0.66
TUBB3-202ENST00000553656 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-202ENST00000553656 ABTB2Q8N961 1025 aa19.17■□□□□ 0.66
TUBB3-202ENST00000553656 MON2Q7Z3U7 1717 aa19.17■□□□□ 0.66
TUBB3-202ENST00000553656 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
TUBB3-202ENST00000553656 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
TUBB3-202ENST00000553656 ALS2Q96Q42 1657 aa19.16■□□□□ 0.66
TUBB3-202ENST00000553656 MEX3CQ5U5Q3 659 aaKnown RBP19.15■□□□□ 0.66
TUBB3-202ENST00000553656 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
TUBB3-202ENST00000553656 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
TUBB3-202ENST00000553656 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
TUBB3-202ENST00000553656 MYOM1P52179 1685 aa19.14■□□□□ 0.66
TUBB3-202ENST00000553656 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-202ENST00000553656 TTC21BQ7Z4L5 1316 aa19.14■□□□□ 0.65
TUBB3-202ENST00000553656 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.65
TUBB3-202ENST00000553656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.65
TUBB3-202ENST00000553656 SSH2Q76I76 1423 aa19.13■□□□□ 0.65
TUBB3-202ENST00000553656 MED1Q15648 1581 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-202ENST00000553656 NUTM2GQ5VZR2 741 aa19.12■□□□□ 0.65
TUBB3-202ENST00000553656 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
TUBB3-202ENST00000553656 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
TUBB3-202ENST00000553656 LRP6O75581 1613 aa19.11■□□□□ 0.65
TUBB3-202ENST00000553656 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
TUBB3-202ENST00000553656 NLRP6P59044 892 aa19.1■□□□□ 0.65
TUBB3-202ENST00000553656 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
TUBB3-202ENST00000553656 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
TUBB3-202ENST00000553656 PIK3C2AO00443 1686 aa19.08■□□□□ 0.65
TUBB3-202ENST00000553656 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
TUBB3-202ENST00000553656 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
TUBB3-202ENST00000553656 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
TUBB3-202ENST00000553656 NME9Q86XW9 330 aa19.06■□□□□ 0.64
TUBB3-202ENST00000553656 PANK3Q9H999 370 aa19.06■□□□□ 0.64
TUBB3-202ENST00000553656 USP19O94966 1318 aa19.05■□□□□ 0.64
TUBB3-202ENST00000553656 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
TUBB3-202ENST00000553656 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
TUBB3-202ENST00000553656 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
TUBB3-202ENST00000553656 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
TUBB3-202ENST00000553656 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
TUBB3-202ENST00000553656 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
TUBB3-202ENST00000553656 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
TUBB3-202ENST00000553656 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
TUBB3-202ENST00000553656 CGNL1Q0VF96 1302 aa19.02■□□□□ 0.64
TUBB3-202ENST00000553656 COG3Q96JB2 828 aa19.02■□□□□ 0.64
TUBB3-202ENST00000553656 SLIT3O75094 1523 aa19.01■□□□□ 0.63
TUBB3-202ENST00000553656 SOX12O15370 315 aa19.01■□□□□ 0.63
TUBB3-202ENST00000553656 GCP02774 474 aa19.01■□□□□ 0.63
TUBB3-202ENST00000553656 PRDM11Q9NQV5 511 aa19.01■□□□□ 0.63
TUBB3-202ENST00000553656 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
TUBB3-202ENST00000553656 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
TUBB3-202ENST00000553656 ZC3H6P61129 1189 aaKnown RBP19■□□□□ 0.63
TUBB3-202ENST00000553656 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
TUBB3-202ENST00000553656 USP54Q70EL1 1684 aa19■□□□□ 0.63
TUBB3-202ENST00000553656 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
TUBB3-202ENST00000553656 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
TUBB3-202ENST00000553656 FYB1O15117 783 aa18.99■□□□□ 0.63
TUBB3-202ENST00000553656 GGNBP2Q9H3C7 697 aa18.99■□□□□ 0.63
TUBB3-202ENST00000553656 AFF2P51816 1311 aa18.99■□□□□ 0.63
TUBB3-202ENST00000553656 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
TUBB3-202ENST00000553656 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
TUBB3-202ENST00000553656 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
TUBB3-202ENST00000553656 CPDO75976 1380 aa18.96■□□□□ 0.63
TUBB3-202ENST00000553656 COL14A1Q05707 1796 aaKnown RBP18.96■□□□□ 0.63
TUBB3-202ENST00000553656 NSD2O96028 1365 aa18.95■□□□□ 0.62
TUBB3-202ENST00000553656 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
TUBB3-202ENST00000553656 FNBP4Q8N3X1 1017 aaPredicted RBP18.95■□□□□ 0.62
TUBB3-202ENST00000553656 USP21Q9UK80 565 aa18.95■□□□□ 0.62
TUBB3-202ENST00000553656 CHRNA2Q15822 529 aa18.94■□□□□ 0.62
TUBB3-202ENST00000553656 NFAT5O94916 1531 aa18.94■□□□□ 0.62
TUBB3-202ENST00000553656 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
TUBB3-202ENST00000553656 SLIT2O94813 1529 aa18.92■□□□□ 0.62
TUBB3-202ENST00000553656 BTG4Q9NY30 223 aa18.92■□□□□ 0.62
TUBB3-202ENST00000553656 NWD2Q9ULI1 1742 aa18.91■□□□□ 0.62
TUBB3-202ENST00000553656 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
TUBB3-202ENST00000553656 UNC5CLQ8IV45 518 aa18.91■□□□□ 0.62
TUBB3-202ENST00000553656 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-202ENST00000553656 ANKRD26Q9UPS8 1709 aa18.9■□□□□ 0.62
TUBB3-202ENST00000553656 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
TUBB3-202ENST00000553656 EVA1CP58658 441 aa18.89■□□□□ 0.61
TUBB3-202ENST00000553656 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
TUBB3-202ENST00000553656 RGS17Q9UGC6 210 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-202ENST00000553656 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-202ENST00000553656 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-202ENST00000553656 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-202ENST00000553656 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
TUBB3-202ENST00000553656 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
TUBB3-202ENST00000553656 LTN1O94822 1766 aa18.87■□□□□ 0.61
TUBB3-202ENST00000553656 ABCC6O95255 1503 aa18.87■□□□□ 0.61
TUBB3-202ENST00000553656 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
TUBB3-202ENST00000553656 QTRT2Q9H974 415 aaKnown RBP18.87■□□□□ 0.61
TUBB3-202ENST00000553656 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
TUBB3-202ENST00000553656 CCDC9Q9Y3X0 531 aaKnown RBP18.87■□□□□ 0.61
TUBB3-202ENST00000553656 LMO7Q8WWI1 1683 aa18.86■□□□□ 0.61
TUBB3-202ENST00000553656 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
TUBB3-202ENST00000553656 AMPHP49418 695 aa18.86■□□□□ 0.61
TUBB3-202ENST00000553656 CC2D1BQ5T0F9 858 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms