RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
HNRNPC-206ENST00000553444 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
HNRNPC-206ENST00000553444 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-206ENST00000553444 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
HNRNPC-206ENST00000553444 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
HNRNPC-206ENST00000553444 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
HNRNPC-206ENST00000553444 MINK1Q8N4C8 1332 aaPredicted RBP17.36■□□□□ 0.37
HNRNPC-206ENST00000553444 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
HNRNPC-206ENST00000553444 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
HNRNPC-206ENST00000553444 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
HNRNPC-206ENST00000553444 TRIM37O94972 964 aa17.34■□□□□ 0.37
HNRNPC-206ENST00000553444 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
HNRNPC-206ENST00000553444 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
HNRNPC-206ENST00000553444 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.36
HNRNPC-206ENST00000553444 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
HNRNPC-206ENST00000553444 APBA3O96018 575 aa17.32■□□□□ 0.36
HNRNPC-206ENST00000553444 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
HNRNPC-206ENST00000553444 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
HNRNPC-206ENST00000553444 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
HNRNPC-206ENST00000553444 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
HNRNPC-206ENST00000553444 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
HNRNPC-206ENST00000553444 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
HNRNPC-206ENST00000553444 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
HNRNPC-206ENST00000553444 USP35Q9P2H5 1018 aa17.27■□□□□ 0.36
HNRNPC-206ENST00000553444 ATP7BP35670 1465 aa17.26■□□□□ 0.35
HNRNPC-206ENST00000553444 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
HNRNPC-206ENST00000553444 SSH2Q76I76 1423 aa17.26■□□□□ 0.35
HNRNPC-206ENST00000553444 YY1P25490 414 aa17.25■□□□□ 0.35
HNRNPC-206ENST00000553444 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
HNRNPC-206ENST00000553444 KDM2AQ9Y2K7 1162 aa17.25■□□□□ 0.35
HNRNPC-206ENST00000553444 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 EVA1CP58658 441 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 LARP1Q6PKG0 1096 aaKnown RBP17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
HNRNPC-206ENST00000553444 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-206ENST00000553444 CPDO75976 1380 aa17.22■□□□□ 0.35
HNRNPC-206ENST00000553444 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
HNRNPC-206ENST00000553444 ACEP12821 1306 aa17.21■□□□□ 0.34
HNRNPC-206ENST00000553444 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
HNRNPC-206ENST00000553444 SPON1Q9HCB6 807 aa17.2■□□□□ 0.34
HNRNPC-206ENST00000553444 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
HNRNPC-206ENST00000553444 USP19O94966 1318 aa17.2■□□□□ 0.34
HNRNPC-206ENST00000553444 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
HNRNPC-206ENST00000553444 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
HNRNPC-206ENST00000553444 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
HNRNPC-206ENST00000553444 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
HNRNPC-206ENST00000553444 KCNQ2O43526 872 aa17.18■□□□□ 0.34
HNRNPC-206ENST00000553444 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
HNRNPC-206ENST00000553444 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
HNRNPC-206ENST00000553444 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
HNRNPC-206ENST00000553444 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
HNRNPC-206ENST00000553444 RREB1Q92766 1687 aa17.16■□□□□ 0.34
HNRNPC-206ENST00000553444 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
HNRNPC-206ENST00000553444 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
HNRNPC-206ENST00000553444 GCP02774 474 aa17.15■□□□□ 0.34
HNRNPC-206ENST00000553444 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
HNRNPC-206ENST00000553444 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
HNRNPC-206ENST00000553444 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
HNRNPC-206ENST00000553444 PLSCR1O15162 318 aa17.11■□□□□ 0.33
HNRNPC-206ENST00000553444 CRB1P82279 1406 aa17.11■□□□□ 0.33
HNRNPC-206ENST00000553444 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
HNRNPC-206ENST00000553444 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
HNRNPC-206ENST00000553444 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
HNRNPC-206ENST00000553444 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
HNRNPC-206ENST00000553444 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-206ENST00000553444 AATKQ6ZMQ8 1374 aa17.08■□□□□ 0.32
HNRNPC-206ENST00000553444 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-206ENST00000553444 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
HNRNPC-206ENST00000553444 DDB1Q16531 1140 aa17.07■□□□□ 0.32
HNRNPC-206ENST00000553444 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
HNRNPC-206ENST00000553444 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
HNRNPC-206ENST00000553444 PROM2Q8N271 834 aa17.06■□□□□ 0.32
HNRNPC-206ENST00000553444 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
HNRNPC-206ENST00000553444 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
HNRNPC-206ENST00000553444 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
HNRNPC-206ENST00000553444 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
HNRNPC-206ENST00000553444 BCL9O00512 1426 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 ZBTB7AO95365 584 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 PTGER2P43116 358 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 NLRP6P59044 892 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 USP6P35125 1406 aa17.04■□□□□ 0.32
HNRNPC-206ENST00000553444 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
HNRNPC-206ENST00000553444 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms