RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 TOPAZ1Q8N9V7 1692 aa25.67■■□□□ 1.7
PNN-202ENST00000553331 ACEP12821 1306 aa25.66■■□□□ 1.7
PNN-202ENST00000553331 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
PNN-202ENST00000553331 CCDC9Q9Y3X0 531 aaKnown RBP25.65■■□□□ 1.7
PNN-202ENST00000553331 NBPF8Q3BBV2 869 aa25.64■■□□□ 1.7
PNN-202ENST00000553331 NUTM2GQ5VZR2 741 aa25.64■■□□□ 1.7
PNN-202ENST00000553331 RALGAPBQ86X10 1494 aa25.62■■□□□ 1.69
PNN-202ENST00000553331 PPIP5K1Q6PFW1 1433 aa25.62■■□□□ 1.69
PNN-202ENST00000553331 NWD2Q9ULI1 1742 aa25.61■■□□□ 1.69
PNN-202ENST00000553331 PLEKHG3A1L390 1219 aa25.61■■□□□ 1.69
PNN-202ENST00000553331 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
PNN-202ENST00000553331 ATAD2Q6PL18 1390 aa25.6■■□□□ 1.69
PNN-202ENST00000553331 TONSLQ96HA7 1378 aa25.6■■□□□ 1.69
PNN-202ENST00000553331 GLI3P10071 1580 aa25.6■■□□□ 1.69
PNN-202ENST00000553331 VPS72Q15906 364 aa25.58■■□□□ 1.69
PNN-202ENST00000553331 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
PNN-202ENST00000553331 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
PNN-202ENST00000553331 EVC2Q86UK5 1308 aa25.57■■□□□ 1.68
PNN-202ENST00000553331 COL14A1Q05707 1796 aaKnown RBP25.56■■□□□ 1.68
PNN-202ENST00000553331 ABTB2Q8N961 1025 aa25.56■■□□□ 1.68
PNN-202ENST00000553331 PRDM11Q9NQV5 511 aa25.56■■□□□ 1.68
PNN-202ENST00000553331 CABP1Q9NZU7 370 aa25.56■■□□□ 1.68
PNN-202ENST00000553331 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
PNN-202ENST00000553331 A0A0G2JS52 829 aa25.53■■□□□ 1.68
PNN-202ENST00000553331 ZC3H6P61129 1189 aaKnown RBP25.53■■□□□ 1.68
PNN-202ENST00000553331 MYT1Q01538 1121 aa25.53■■□□□ 1.68
PNN-202ENST00000553331 CARD11Q9BXL7 1154 aa25.53■■□□□ 1.68
PNN-202ENST00000553331 NRAPQ86VF7 1730 aa25.53■■□□□ 1.68
PNN-202ENST00000553331 BRWD3Q6RI45 1802 aa25.52■■□□□ 1.68
PNN-202ENST00000553331 CHRNA2Q15822 529 aa25.52■■□□□ 1.68
PNN-202ENST00000553331 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
PNN-202ENST00000553331 KIAA0232Q92628 1395 aa25.51■■□□□ 1.67
PNN-202ENST00000553331 FAM98CQ17RN3 349 aaKnown RBP25.47■■□□□ 1.67
PNN-202ENST00000553331 NLRP13Q86W25 1043 aa25.46■■□□□ 1.67
PNN-202ENST00000553331 STRN4Q9NRL3 753 aa25.46■■□□□ 1.67
PNN-202ENST00000553331 USP6P35125 1406 aa25.45■■□□□ 1.66
PNN-202ENST00000553331 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
PNN-202ENST00000553331 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
PNN-202ENST00000553331 ONECUT3O60422 494 aaPredicted RBP25.42■■□□□ 1.66
PNN-202ENST00000553331 EVA1CP58658 441 aa25.42■■□□□ 1.66
PNN-202ENST00000553331 NLRP6P59044 892 aa25.42■■□□□ 1.66
PNN-202ENST00000553331 SPATA31A5Q5VU36 1347 aa25.41■■□□□ 1.66
PNN-202ENST00000553331 SPATA31A7Q8IWB4 1347 aa25.41■■□□□ 1.66
PNN-202ENST00000553331 KRT27Q7Z3Y8 459 aa25.41■■□□□ 1.66
PNN-202ENST00000553331 BRD4O60885 1362 aaPredicted RBP25.41■■□□□ 1.66
PNN-202ENST00000553331 USP19O94966 1318 aa25.4■■□□□ 1.66
PNN-202ENST00000553331 GCP02774 474 aa25.4■■□□□ 1.66
PNN-202ENST00000553331 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
PNN-202ENST00000553331 CCDC125Q86Z20 511 aa25.38■■□□□ 1.65
PNN-202ENST00000553331 USP35Q9P2H5 1018 aa25.38■■□□□ 1.65
PNN-202ENST00000553331 AKAP12Q02952 1782 aa25.38■■□□□ 1.65
PNN-202ENST00000553331 ZNF692Q9BU19 519 aaPredicted RBP25.37■■□□□ 1.65
PNN-202ENST00000553331 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
PNN-202ENST00000553331 PIK3C2AO00443 1686 aa25.36■■□□□ 1.65
PNN-202ENST00000553331 SPATA31A1Q5TZJ5 1347 aa25.35■■□□□ 1.65
PNN-202ENST00000553331 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
PNN-202ENST00000553331 CPDO75976 1380 aa25.34■■□□□ 1.65
PNN-202ENST00000553331 KTN1Q86UP2 1357 aaKnown RBP25.34■■□□□ 1.65
PNN-202ENST00000553331 SBNO2Q9Y2G9 1366 aa25.34■■□□□ 1.65
PNN-202ENST00000553331 CAMTA1Q9Y6Y1 1673 aa25.34■■□□□ 1.65
PNN-202ENST00000553331 SF3B2Q13435 895 aaKnown RBP25.34■■□□□ 1.65
PNN-202ENST00000553331 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
PNN-202ENST00000553331 SOX12O15370 315 aa25.33■■□□□ 1.65
PNN-202ENST00000553331 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
PNN-202ENST00000553331 FAM182BQ5T319 152 aa25.32■■□□□ 1.64
PNN-202ENST00000553331 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
PNN-202ENST00000553331 LMO7Q8WWI1 1683 aa25.31■■□□□ 1.64
PNN-202ENST00000553331 EP400Q96L91 3159 aa25.31■■□□□ 1.64
PNN-202ENST00000553331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.3■■□□□ 1.64
PNN-202ENST00000553331 SLIT3O75094 1523 aa25.3■■□□□ 1.64
PNN-202ENST00000553331 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
PNN-202ENST00000553331 ST20-MTHFSA0A0A6YYL1 179 aa25.29■■□□□ 1.64
PNN-202ENST00000553331 DEFB132Q7Z7B7 95 aa25.29■■□□□ 1.64
PNN-202ENST00000553331 TTC21AQ8NDW8 1320 aa25.29■■□□□ 1.64
PNN-202ENST00000553331 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
PNN-202ENST00000553331 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
PNN-202ENST00000553331 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
PNN-202ENST00000553331 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
PNN-202ENST00000553331 ZRANB1Q9UGI0 708 aa25.25■■□□□ 1.63
PNN-202ENST00000553331 COL5A2P05997 1499 aaPredicted RBP25.24■■□□□ 1.63
PNN-202ENST00000553331 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
PNN-202ENST00000553331 KCNH5Q8NCM2 988 aa25.24■■□□□ 1.63
PNN-202ENST00000553331 AATKQ6ZMQ8 1374 aa25.23■■□□□ 1.63
PNN-202ENST00000553331 CD163L1Q9NR16 1453 aa25.22■■□□□ 1.63
PNN-202ENST00000553331 BARGINQ6ZT62 677 aa25.22■■□□□ 1.63
PNN-202ENST00000553331 NME9Q86XW9 330 aa25.22■■□□□ 1.63
PNN-202ENST00000553331 TESK2Q96S53 571 aa25.22■■□□□ 1.63
PNN-202ENST00000553331 TERF2IPQ9NYB0 399 aa25.21■■□□□ 1.63
PNN-202ENST00000553331 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
PNN-202ENST00000553331 PDE3BQ13370 1112 aa25.2■■□□□ 1.62
PNN-202ENST00000553331 TOM1L2Q6ZVM7 507 aa25.2■■□□□ 1.62
PNN-202ENST00000553331 AXIN2Q9Y2T1 843 aa25.2■■□□□ 1.62
PNN-202ENST00000553331 COL18A1P39060 1754 aa25.2■■□□□ 1.62
PNN-202ENST00000553331 ARHGEF25Q86VW2 580 aa25.19■■□□□ 1.62
PNN-202ENST00000553331 CRB1P82279 1406 aa25.19■■□□□ 1.62
PNN-202ENST00000553331 USP47Q96K76 1375 aa25.18■■□□□ 1.62
PNN-202ENST00000553331 BAG6P46379 1132 aa25.18■■□□□ 1.62
PNN-202ENST00000553331 A0A1W2PP64 1363 aa25.18■■□□□ 1.62
PNN-202ENST00000553331 PUS7Q96PZ0 661 aaKnown RBP25.17■■□□□ 1.62
PNN-202ENST00000553331 THRAP3Q9Y2W1 955 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms