RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CCDC9Q9Y3X0 531 aaKnown RBP22.75■■□□□ 1.23
CDK4-215ENST00000553237 ABCA3Q99758 1704 aa22.74■■□□□ 1.23
CDK4-215ENST00000553237 TRPM1Q7Z4N2 1603 aa22.74■■□□□ 1.23
CDK4-215ENST00000553237 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
CDK4-215ENST00000553237 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
CDK4-215ENST00000553237 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.72■■□□□ 1.23
CDK4-215ENST00000553237 VPS72Q15906 364 aa22.72■■□□□ 1.23
CDK4-215ENST00000553237 ATAD2Q6PL18 1390 aa22.72■■□□□ 1.23
CDK4-215ENST00000553237 BTG4Q9NY30 223 aa22.71■■□□□ 1.23
CDK4-215ENST00000553237 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
CDK4-215ENST00000553237 QRICH2Q9H0J4 1663 aa22.71■■□□□ 1.23
CDK4-215ENST00000553237 GLI3P10071 1580 aa22.7■■□□□ 1.22
CDK4-215ENST00000553237 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.22
CDK4-215ENST00000553237 PLCH1Q4KWH8 1693 aa22.69■■□□□ 1.22
CDK4-215ENST00000553237 CABP1Q9NZU7 370 aa22.69■■□□□ 1.22
CDK4-215ENST00000553237 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
CDK4-215ENST00000553237 EVC2Q86UK5 1308 aa22.68■■□□□ 1.22
CDK4-215ENST00000553237 ABTB2Q8N961 1025 aa22.68■■□□□ 1.22
CDK4-215ENST00000553237 PRDM11Q9NQV5 511 aa22.68■■□□□ 1.22
CDK4-215ENST00000553237 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
CDK4-215ENST00000553237 NWD2Q9ULI1 1742 aa22.66■■□□□ 1.22
CDK4-215ENST00000553237 CHRNA2Q15822 529 aa22.66■■□□□ 1.22
CDK4-215ENST00000553237 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
CDK4-215ENST00000553237 CARD11Q9BXL7 1154 aa22.65■■□□□ 1.22
CDK4-215ENST00000553237 KIAA0232Q92628 1395 aa22.64■■□□□ 1.22
CDK4-215ENST00000553237 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
CDK4-215ENST00000553237 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
CDK4-215ENST00000553237 A0A0G2JS52 829 aa22.62■■□□□ 1.21
CDK4-215ENST00000553237 MYT1Q01538 1121 aa22.62■■□□□ 1.21
CDK4-215ENST00000553237 ONECUT3O60422 494 aaPredicted RBP22.61■■□□□ 1.21
CDK4-215ENST00000553237 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
CDK4-215ENST00000553237 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
CDK4-215ENST00000553237 NRAPQ86VF7 1730 aa22.6■■□□□ 1.21
CDK4-215ENST00000553237 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
CDK4-215ENST00000553237 USP6P35125 1406 aa22.57■■□□□ 1.2
CDK4-215ENST00000553237 PHRF1Q9P1Y6 1649 aaKnown RBP22.57■■□□□ 1.2
CDK4-215ENST00000553237 USP19O94966 1318 aa22.57■■□□□ 1.2
CDK4-215ENST00000553237 SPATA31A5Q5VU36 1347 aa22.57■■□□□ 1.2
CDK4-215ENST00000553237 SPATA31A7Q8IWB4 1347 aa22.57■■□□□ 1.2
CDK4-215ENST00000553237 GCP02774 474 aa22.56■■□□□ 1.2
CDK4-215ENST00000553237 NLRP6P59044 892 aa22.56■■□□□ 1.2
CDK4-215ENST00000553237 KRT27Q7Z3Y8 459 aa22.56■■□□□ 1.2
CDK4-215ENST00000553237 BRWD3Q6RI45 1802 aa22.55■■□□□ 1.2
CDK4-215ENST00000553237 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
CDK4-215ENST00000553237 EVA1CP58658 441 aa22.55■■□□□ 1.2
CDK4-215ENST00000553237 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
CDK4-215ENST00000553237 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
CDK4-215ENST00000553237 ZNF692Q9BU19 519 aaPredicted RBP22.53■■□□□ 1.2
CDK4-215ENST00000553237 NRKQ7Z2Y5 1582 aa22.52■■□□□ 1.2
CDK4-215ENST00000553237 SSH2Q76I76 1423 aa22.52■■□□□ 1.2
CDK4-215ENST00000553237 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
CDK4-215ENST00000553237 SPATA31A1Q5TZJ5 1347 aa22.51■■□□□ 1.19
CDK4-215ENST00000553237 TTC21BQ7Z4L5 1316 aa22.51■■□□□ 1.19
CDK4-215ENST00000553237 CPDO75976 1380 aa22.5■■□□□ 1.19
CDK4-215ENST00000553237 SBNO2Q9Y2G9 1366 aa22.5■■□□□ 1.19
CDK4-215ENST00000553237 EP400Q96L91 3159 aa22.5■■□□□ 1.19
CDK4-215ENST00000553237 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
CDK4-215ENST00000553237 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
CDK4-215ENST00000553237 FAM182BQ5T319 152 aa22.48■■□□□ 1.19
CDK4-215ENST00000553237 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
CDK4-215ENST00000553237 CAMTA1Q9Y6Y1 1673 aa22.48■■□□□ 1.19
CDK4-215ENST00000553237 KTN1Q86UP2 1357 aaKnown RBP22.48■■□□□ 1.19
CDK4-215ENST00000553237 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
CDK4-215ENST00000553237 CPSF1Q10570 1443 aaKnown RBP22.47■■□□□ 1.19
CDK4-215ENST00000553237 SOX12O15370 315 aa22.46■■□□□ 1.19
CDK4-215ENST00000553237 SF3B2Q13435 895 aaKnown RBP22.46■■□□□ 1.19
CDK4-215ENST00000553237 DEFB132Q7Z7B7 95 aa22.46■■□□□ 1.19
CDK4-215ENST00000553237 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
CDK4-215ENST00000553237 SLC12A5Q9H2X9 1139 aa22.45■■□□□ 1.18
CDK4-215ENST00000553237 PIK3C2AO00443 1686 aa22.44■■□□□ 1.18
CDK4-215ENST00000553237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
CDK4-215ENST00000553237 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
CDK4-215ENST00000553237 SLIT3O75094 1523 aa22.43■■□□□ 1.18
CDK4-215ENST00000553237 AKAP12Q02952 1782 aa22.43■■□□□ 1.18
CDK4-215ENST00000553237 TESK2Q96S53 571 aa22.42■■□□□ 1.18
CDK4-215ENST00000553237 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
CDK4-215ENST00000553237 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
CDK4-215ENST00000553237 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
CDK4-215ENST00000553237 AATKQ6ZMQ8 1374 aa22.4■■□□□ 1.18
CDK4-215ENST00000553237 THSD7AQ9UPZ6 1657 aa22.4■■□□□ 1.18
CDK4-215ENST00000553237 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
CDK4-215ENST00000553237 HDGFL2Q7Z4V5 671 aaPredicted RBP22.4■■□□□ 1.18
CDK4-215ENST00000553237 KCNH5Q8NCM2 988 aa22.4■■□□□ 1.18
CDK4-215ENST00000553237 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
CDK4-215ENST00000553237 AXIN2Q9Y2T1 843 aa22.39■■□□□ 1.17
CDK4-215ENST00000553237 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
CDK4-215ENST00000553237 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
CDK4-215ENST00000553237 NME9Q86XW9 330 aa22.38■■□□□ 1.17
CDK4-215ENST00000553237 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
CDK4-215ENST00000553237 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
CDK4-215ENST00000553237 TERF2IPQ9NYB0 399 aa22.36■■□□□ 1.17
CDK4-215ENST00000553237 THRAP3Q9Y2W1 955 aaKnown RBP22.36■■□□□ 1.17
CDK4-215ENST00000553237 BAG6P46379 1132 aa22.35■■□□□ 1.17
CDK4-215ENST00000553237 TOM1L2Q6ZVM7 507 aa22.35■■□□□ 1.17
CDK4-215ENST00000553237 MON2Q7Z3U7 1717 aa22.34■■□□□ 1.17
CDK4-215ENST00000553237 CRB1P82279 1406 aa22.34■■□□□ 1.17
CDK4-215ENST00000553237 A0A1W2PP64 1363 aa22.34■■□□□ 1.17
CDK4-215ENST00000553237 USP47Q96K76 1375 aa22.34■■□□□ 1.17
CDK4-215ENST00000553237 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.17
CDK4-215ENST00000553237 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms