RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RGPD8O14715 1765 aaPredicted RBP26.07■■□□□ 1.76
RBFOX1-215ENST00000553186 CFAP53Q96M91 514 aa26.07■■□□□ 1.76
RBFOX1-215ENST00000553186 SHPRHQ149N8 1683 aa26.06■■□□□ 1.76
RBFOX1-215ENST00000553186 PROSER2Q86WR7 435 aaPredicted RBP26.03■■□□□ 1.76
RBFOX1-215ENST00000553186 NGDNQ8NEJ9 315 aaKnown RBP26.03■■□□□ 1.76
RBFOX1-215ENST00000553186 COG3Q96JB2 828 aa26.03■■□□□ 1.76
RBFOX1-215ENST00000553186 PNPLA6Q8IY17 1366 aa26.03■■□□□ 1.76
RBFOX1-215ENST00000553186 COL3A1P02461 1466 aaPredicted RBP26.02■■□□□ 1.76
RBFOX1-215ENST00000553186 FBLN1P23142 703 aa26.02■■□□□ 1.76
RBFOX1-215ENST00000553186 POLKQ9UBT6 870 aa26.02■■□□□ 1.76
RBFOX1-215ENST00000553186 SALL2Q9Y467 1007 aaPredicted RBP26.01■■□□□ 1.75
RBFOX1-215ENST00000553186 AATKQ6ZMQ8 1374 aa26■■□□□ 1.75
RBFOX1-215ENST00000553186 SMG6Q86US8 1419 aaKnown RBP26■■□□□ 1.75
RBFOX1-215ENST00000553186 C14orf37Q86TY3 774 aa26■■□□□ 1.75
RBFOX1-215ENST00000553186 CCDC146Q8IYE0 955 aa25.99■■□□□ 1.75
RBFOX1-215ENST00000553186 TTC21AQ8NDW8 1320 aa25.99■■□□□ 1.75
RBFOX1-215ENST00000553186 OVOS2A0A0J9YW53 1432 aa25.98■■□□□ 1.75
RBFOX1-215ENST00000553186 OVOS2Q6IE36 1432 aa25.98■■□□□ 1.75
RBFOX1-215ENST00000553186 STRCQ7RTU9 1775 aa25.98■■□□□ 1.75
RBFOX1-215ENST00000553186 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
RBFOX1-215ENST00000553186 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
RBFOX1-215ENST00000553186 NUDCQ9Y266 331 aa25.96■■□□□ 1.75
RBFOX1-215ENST00000553186 PDE3BQ13370 1112 aa25.95■■□□□ 1.74
RBFOX1-215ENST00000553186 C19orf44Q9H6X5 657 aa25.95■■□□□ 1.74
RBFOX1-215ENST00000553186 TMEM94Q12767 1356 aa25.94■■□□□ 1.74
RBFOX1-215ENST00000553186 APAF1O14727 1248 aa25.93■■□□□ 1.74
RBFOX1-215ENST00000553186 EMILIN1Q9Y6C2 1016 aa25.93■■□□□ 1.74
RBFOX1-215ENST00000553186 NCOA3Q9Y6Q9 1424 aa25.93■■□□□ 1.74
RBFOX1-215ENST00000553186 USP31Q70CQ4 1352 aa25.92■■□□□ 1.74
RBFOX1-215ENST00000553186 ZNF521Q96K83 1311 aa25.92■■□□□ 1.74
RBFOX1-215ENST00000553186 ESCO1Q5FWF5 840 aa25.92■■□□□ 1.74
RBFOX1-215ENST00000553186 SUPT16HQ9Y5B9 1047 aaKnown RBP25.91■■□□□ 1.74
RBFOX1-215ENST00000553186 DIAPH1O60610 1272 aaKnown RBP25.9■■□□□ 1.74
RBFOX1-215ENST00000553186 U2AF1L5P0DN76 240 aaPredicted RBP25.9■■□□□ 1.74
RBFOX1-215ENST00000553186 U2AF1Q01081 240 aaKnown RBP eCLIP25.9■■□□□ 1.74
RBFOX1-215ENST00000553186 MAP2P11137 1827 aaKnown RBP25.9■■□□□ 1.74
RBFOX1-215ENST00000553186 PPM1GO15355 546 aaPredicted RBP25.9■■□□□ 1.74
RBFOX1-215ENST00000553186 CDK12Q9NYV4 1490 aaPredicted RBP25.89■■□□□ 1.74
RBFOX1-215ENST00000553186 RRS1Q15050 365 aaKnown RBP25.89■■□□□ 1.74
RBFOX1-215ENST00000553186 RUNDC1Q96C34 613 aa25.89■■□□□ 1.74
RBFOX1-215ENST00000553186 CDCA7LQ96GN5 454 aa25.88■■□□□ 1.73
RBFOX1-215ENST00000553186 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
RBFOX1-215ENST00000553186 PIK3C2AO00443 1686 aa25.87■■□□□ 1.73
RBFOX1-215ENST00000553186 NGEFQ8N5V2 710 aa25.86■■□□□ 1.73
RBFOX1-215ENST00000553186 DCCP43146 1447 aa25.86■■□□□ 1.73
RBFOX1-215ENST00000553186 U2SURPO15042 1029 aaKnown RBP25.86■■□□□ 1.73
RBFOX1-215ENST00000553186 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
RBFOX1-215ENST00000553186 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
RBFOX1-215ENST00000553186 TCP11L2Q8N4U5 519 aa25.83■■□□□ 1.73
RBFOX1-215ENST00000553186 PLEKHF1Q96S99 279 aa25.83■■□□□ 1.73
RBFOX1-215ENST00000553186 IL13P35225 146 aa25.82■■□□□ 1.72
RBFOX1-215ENST00000553186 NLRP6P59044 892 aa25.82■■□□□ 1.72
RBFOX1-215ENST00000553186 ATF3P18847 181 aa25.82■■□□□ 1.72
RBFOX1-215ENST00000553186 MST1RQ04912 1400 aa25.82■■□□□ 1.72
RBFOX1-215ENST00000553186 PSME1Q06323 249 aa25.81■■□□□ 1.72
RBFOX1-215ENST00000553186 ABTB2Q8N961 1025 aa25.81■■□□□ 1.72
RBFOX1-215ENST00000553186 PAK3O75914 559 aaPredicted RBP25.8■■□□□ 1.72
RBFOX1-215ENST00000553186 FOXO3O43524 673 aa25.8■■□□□ 1.72
RBFOX1-215ENST00000553186 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
RBFOX1-215ENST00000553186 ZNF335Q9H4Z2 1342 aaPredicted RBP25.8■■□□□ 1.72
RBFOX1-215ENST00000553186 FKBP8Q14318 412 aa25.79■■□□□ 1.72
RBFOX1-215ENST00000553186 GOLGA2Q08379 1002 aa25.79■■□□□ 1.72
RBFOX1-215ENST00000553186 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
RBFOX1-215ENST00000553186 NEFLP07196 543 aa25.78■■□□□ 1.72
RBFOX1-215ENST00000553186 MARF1Q9Y4F3 1742 aaKnown RBP25.78■■□□□ 1.72
RBFOX1-215ENST00000553186 NUTM2GQ5VZR2 741 aa25.78■■□□□ 1.72
RBFOX1-215ENST00000553186 CADPS2Q86UW7 1296 aa25.78■■□□□ 1.72
RBFOX1-215ENST00000553186 LRRC7Q96NW7 1537 aa25.77■■□□□ 1.72
RBFOX1-215ENST00000553186 SOX12O15370 315 aa25.77■■□□□ 1.72
RBFOX1-215ENST00000553186 NCBP3Q53F19 620 aaKnown RBP25.77■■□□□ 1.72
RBFOX1-215ENST00000553186 WWC1Q8IX03 1113 aa25.77■■□□□ 1.72
RBFOX1-215ENST00000553186 MAP3K19Q56UN5 1328 aa25.77■■□□□ 1.72
RBFOX1-215ENST00000553186 FCHSD2O94868 740 aa25.76■■□□□ 1.71
RBFOX1-215ENST00000553186 MSH6P52701 1360 aa25.76■■□□□ 1.71
RBFOX1-215ENST00000553186 RRP7AQ9Y3A4 280 aaKnown RBP25.76■■□□□ 1.71
RBFOX1-215ENST00000553186 PEAK1Q9H792 1746 aa25.75■■□□□ 1.71
RBFOX1-215ENST00000553186 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
RBFOX1-215ENST00000553186 SLFN5Q08AF3 891 aa25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 CCDC27Q2M243 656 aa25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 DUSP27Q5VZP5 1158 aa25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 RNF123Q5XPI4 1314 aa25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
RBFOX1-215ENST00000553186 NEUROD2Q15784 382 aa25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 TRMT2AQ8IZ69 625 aaKnown RBP25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 DMRT2Q9Y5R5 561 aa25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 HSP90AB2PQ58FF8 381 aa25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 PNNQ9H307 717 aaKnown RBP25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 SPINK5Q9NQ38 1064 aaPredicted RBP25.73■■□□□ 1.71
RBFOX1-215ENST00000553186 XPCQ01831 940 aaPredicted RBP25.72■■□□□ 1.71
RBFOX1-215ENST00000553186 EIF4A2Q14240 407 aaKnown RBP25.72■■□□□ 1.71
RBFOX1-215ENST00000553186 SBNO1A3KN83 1393 aa25.72■■□□□ 1.71
RBFOX1-215ENST00000553186 FLT4P35916 1363 aa25.7■■□□□ 1.7
RBFOX1-215ENST00000553186 MAPK8IP3Q9UPT6 1336 aa25.7■■□□□ 1.7
RBFOX1-215ENST00000553186 KRT28Q7Z3Y7 464 aa25.7■■□□□ 1.7
RBFOX1-215ENST00000553186 HMOX1P09601 288 aa25.69■■□□□ 1.7
RBFOX1-215ENST00000553186 PRKAR2BP31323 418 aa25.69■■□□□ 1.7
RBFOX1-215ENST00000553186 TMPOP42166 694 aaKnown RBP25.69■■□□□ 1.7
RBFOX1-215ENST00000553186 RCAN3Q9UKA8 241 aa25.68■■□□□ 1.7
RBFOX1-215ENST00000553186 KIF24Q5T7B8 1368 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms