RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.53
CALCOCO1-218ENST00000550804 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
CALCOCO1-218ENST00000550804 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
CALCOCO1-218ENST00000550804 NINLQ9Y2I6 1382 aa18.38■□□□□ 0.53
CALCOCO1-218ENST00000550804 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
CALCOCO1-218ENST00000550804 WDR63Q8IWG1 891 aa18.37■□□□□ 0.53
CALCOCO1-218ENST00000550804 SIRT1Q96EB6 747 aa18.37■□□□□ 0.53
CALCOCO1-218ENST00000550804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
CALCOCO1-218ENST00000550804 TERF2IPQ9NYB0 399 aa18.36■□□□□ 0.53
CALCOCO1-218ENST00000550804 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
CALCOCO1-218ENST00000550804 RLBP1P12271 317 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 TECPR2O15040 1411 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 USP32Q8NFA0 1604 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 SLIT1O75093 1534 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 CLUAP1Q96AJ1 413 aa18.35■□□□□ 0.53
CALCOCO1-218ENST00000550804 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
CALCOCO1-218ENST00000550804 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
CALCOCO1-218ENST00000550804 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
CALCOCO1-218ENST00000550804 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
CALCOCO1-218ENST00000550804 NSD2O96028 1365 aa18.33■□□□□ 0.52
CALCOCO1-218ENST00000550804 MED14O60244 1454 aa18.33■□□□□ 0.52
CALCOCO1-218ENST00000550804 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
CALCOCO1-218ENST00000550804 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
CALCOCO1-218ENST00000550804 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
CALCOCO1-218ENST00000550804 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
CALCOCO1-218ENST00000550804 WASLO00401 505 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-218ENST00000550804 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
CALCOCO1-218ENST00000550804 C8orf34Q49A92 452 aa18.31■□□□□ 0.52
CALCOCO1-218ENST00000550804 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 NCKAP5LQ9HCH0 1330 aa18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 CPS1P31327 1500 aa18.3■□□□□ 0.52
CALCOCO1-218ENST00000550804 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
CALCOCO1-218ENST00000550804 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
CALCOCO1-218ENST00000550804 PCDHB15Q9Y5E8 787 aa18.29■□□□□ 0.52
CALCOCO1-218ENST00000550804 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
CALCOCO1-218ENST00000550804 PTPRUQ92729 1446 aa18.27■□□□□ 0.52
CALCOCO1-218ENST00000550804 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
CALCOCO1-218ENST00000550804 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
CALCOCO1-218ENST00000550804 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.52
CALCOCO1-218ENST00000550804 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
CALCOCO1-218ENST00000550804 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
CALCOCO1-218ENST00000550804 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
CALCOCO1-218ENST00000550804 RIPK4P57078 832 aa18.26■□□□□ 0.51
CALCOCO1-218ENST00000550804 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
CALCOCO1-218ENST00000550804 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
CALCOCO1-218ENST00000550804 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
CALCOCO1-218ENST00000550804 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
CALCOCO1-218ENST00000550804 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
CALCOCO1-218ENST00000550804 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
CALCOCO1-218ENST00000550804 ATP7BP35670 1465 aa18.23■□□□□ 0.51
CALCOCO1-218ENST00000550804 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
CALCOCO1-218ENST00000550804 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
CALCOCO1-218ENST00000550804 NME9Q86XW9 330 aa18.22■□□□□ 0.51
CALCOCO1-218ENST00000550804 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
CALCOCO1-218ENST00000550804 COL3A1P02461 1466 aaPredicted RBP18.22■□□□□ 0.51
CALCOCO1-218ENST00000550804 HMOX1P09601 288 aa18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 CPSF1Q10570 1443 aaKnown RBP18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
CALCOCO1-218ENST00000550804 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
CALCOCO1-218ENST00000550804 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
CALCOCO1-218ENST00000550804 SEC24BO95487 1268 aa18.19■□□□□ 0.5
CALCOCO1-218ENST00000550804 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
CALCOCO1-218ENST00000550804 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
CALCOCO1-218ENST00000550804 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
CALCOCO1-218ENST00000550804 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
CALCOCO1-218ENST00000550804 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
CALCOCO1-218ENST00000550804 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
CALCOCO1-218ENST00000550804 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 TRIM27P14373 513 aa18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
CALCOCO1-218ENST00000550804 FCHSD2O94868 740 aa18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 FTSJ3Q8IY81 847 aaKnown RBP18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 SETD1BQ9UPS6 1966 aaKnown RBP18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
CALCOCO1-218ENST00000550804 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
CALCOCO1-218ENST00000550804 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
CALCOCO1-218ENST00000550804 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
CALCOCO1-218ENST00000550804 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-218ENST00000550804 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
CALCOCO1-218ENST00000550804 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CALCOCO1-218ENST00000550804 KCNA6P17658 529 aa18.13■□□□□ 0.49
CALCOCO1-218ENST00000550804 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
CALCOCO1-218ENST00000550804 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms