RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 COL3A1P02461 1466 aaPredicted RBP25.2■■□□□ 1.62
BRF1-215ENST00000549655 ANKLE2Q86XL3 938 aa25.19■■□□□ 1.62
BRF1-215ENST00000549655 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
BRF1-215ENST00000549655 NME9Q86XW9 330 aa25.18■■□□□ 1.62
BRF1-215ENST00000549655 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
BRF1-215ENST00000549655 NUTM2FA1L443 756 aa25.17■■□□□ 1.62
BRF1-215ENST00000549655 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
BRF1-215ENST00000549655 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
BRF1-215ENST00000549655 TCP11L2Q8N4U5 519 aa25.16■■□□□ 1.62
BRF1-215ENST00000549655 PNPLA6Q8IY17 1366 aa25.16■■□□□ 1.62
BRF1-215ENST00000549655 TRMT2AQ8IZ69 625 aaKnown RBP25.16■■□□□ 1.62
BRF1-215ENST00000549655 PLEKHG3A1L390 1219 aa25.15■■□□□ 1.62
BRF1-215ENST00000549655 KCNA6P17658 529 aa25.14■■□□□ 1.62
BRF1-215ENST00000549655 WWC1Q8IX03 1113 aa25.14■■□□□ 1.62
BRF1-215ENST00000549655 SPINK5Q9NQ38 1064 aaPredicted RBP25.14■■□□□ 1.62
BRF1-215ENST00000549655 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.61
BRF1-215ENST00000549655 B4GALNT3Q6L9W6 998 aa25.14■■□□□ 1.61
BRF1-215ENST00000549655 POLKQ9UBT6 870 aa25.14■■□□□ 1.61
BRF1-215ENST00000549655 E9PSI1 815 aa25.13■■□□□ 1.61
BRF1-215ENST00000549655 FBLN1P23142 703 aa25.13■■□□□ 1.61
BRF1-215ENST00000549655 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
BRF1-215ENST00000549655 ACEP12821 1306 aa25.13■■□□□ 1.61
BRF1-215ENST00000549655 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
BRF1-215ENST00000549655 RRP7AQ9Y3A4 280 aaKnown RBP25.13■■□□□ 1.61
BRF1-215ENST00000549655 DIAPH1O60610 1272 aaKnown RBP25.12■■□□□ 1.61
BRF1-215ENST00000549655 DMRT2Q9Y5R5 561 aa25.12■■□□□ 1.61
BRF1-215ENST00000549655 COG3Q96JB2 828 aa25.11■■□□□ 1.61
BRF1-215ENST00000549655 MAP2P11137 1827 aaKnown RBP25.11■■□□□ 1.61
BRF1-215ENST00000549655 NKTRP30414 1462 aaKnown RBP25.11■■□□□ 1.61
BRF1-215ENST00000549655 PPM1GO15355 546 aaPredicted RBP25.1■■□□□ 1.61
BRF1-215ENST00000549655 PHF23Q9BUL5 403 aaPredicted RBP25.09■■□□□ 1.61
BRF1-215ENST00000549655 TTC21BQ7Z4L5 1316 aa25.08■■□□□ 1.61
BRF1-215ENST00000549655 AATKQ6ZMQ8 1374 aa25.08■■□□□ 1.6
BRF1-215ENST00000549655 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
BRF1-215ENST00000549655 NRKQ7Z2Y5 1582 aa25.07■■□□□ 1.6
BRF1-215ENST00000549655 USP6P35125 1406 aa25.07■■□□□ 1.6
BRF1-215ENST00000549655 CCDC27Q2M243 656 aa25.07■■□□□ 1.6
BRF1-215ENST00000549655 NCBP3Q53F19 620 aaKnown RBP25.06■■□□□ 1.6
BRF1-215ENST00000549655 PLIN1O60240 522 aa25.05■■□□□ 1.6
BRF1-215ENST00000549655 EMILIN1Q9Y6C2 1016 aa25.05■■□□□ 1.6
BRF1-215ENST00000549655 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
BRF1-215ENST00000549655 TSHZ2Q9NRE2 1034 aa25.05■■□□□ 1.6
BRF1-215ENST00000549655 WDR63Q8IWG1 891 aa25.04■■□□□ 1.6
BRF1-215ENST00000549655 PMFBP1Q8TBY8 1022 aa25.04■■□□□ 1.6
BRF1-215ENST00000549655 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
BRF1-215ENST00000549655 EXOC6Q8TAG9 804 aa25.03■■□□□ 1.6
BRF1-215ENST00000549655 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
BRF1-215ENST00000549655 CDK12Q9NYV4 1490 aaPredicted RBP25.02■■□□□ 1.6
BRF1-215ENST00000549655 PNNQ9H307 717 aaKnown RBP25.02■■□□□ 1.6
BRF1-215ENST00000549655 MAPK8IP3Q9UPT6 1336 aa25.01■■□□□ 1.59
BRF1-215ENST00000549655 ANKARQ7Z5J8 1434 aa25■■□□□ 1.59
BRF1-215ENST00000549655 RRS1Q15050 365 aaKnown RBP25■■□□□ 1.59
BRF1-215ENST00000549655 NPHP4O75161 1426 aaPredicted RBP25■■□□□ 1.59
BRF1-215ENST00000549655 SSH2Q76I76 1423 aa25■■□□□ 1.59
BRF1-215ENST00000549655 NGDNQ8NEJ9 315 aaKnown RBP25■■□□□ 1.59
BRF1-215ENST00000549655 FCHSD2O94868 740 aa24.99■■□□□ 1.59
BRF1-215ENST00000549655 TMPOP42166 694 aaKnown RBP24.98■■□□□ 1.59
BRF1-215ENST00000549655 OVOS2A0A0J9YW53 1432 aa24.98■■□□□ 1.59
BRF1-215ENST00000549655 OVOS2Q6IE36 1432 aa24.98■■□□□ 1.59
BRF1-215ENST00000549655 FMN2Q9NZ56 1722 aa24.97■■□□□ 1.59
BRF1-215ENST00000549655 TTC21AQ8NDW8 1320 aa24.97■■□□□ 1.59
BRF1-215ENST00000549655 IL13P35225 146 aa24.96■■□□□ 1.59
BRF1-215ENST00000549655 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
BRF1-215ENST00000549655 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
BRF1-215ENST00000549655 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
BRF1-215ENST00000549655 NALCNQ8IZF0 1738 aa24.94■■□□□ 1.58
BRF1-215ENST00000549655 C20orf194Q5TEA3 1177 aa24.93■■□□□ 1.58
BRF1-215ENST00000549655 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
BRF1-215ENST00000549655 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
BRF1-215ENST00000549655 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
BRF1-215ENST00000549655 TRIM35Q9UPQ4 493 aa24.93■■□□□ 1.58
BRF1-215ENST00000549655 USP31Q70CQ4 1352 aa24.91■■□□□ 1.58
BRF1-215ENST00000549655 HMOX1P09601 288 aa24.91■■□□□ 1.58
BRF1-215ENST00000549655 RIPK4P57078 832 aa24.91■■□□□ 1.58
BRF1-215ENST00000549655 MYH16Q9H6N6 1097 aa24.91■■□□□ 1.58
BRF1-215ENST00000549655 BCAR3O75815 825 aa24.9■■□□□ 1.58
BRF1-215ENST00000549655 NEFMP07197 916 aa24.9■■□□□ 1.58
BRF1-215ENST00000549655 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
BRF1-215ENST00000549655 SOX12O15370 315 aa24.85■■□□□ 1.57
BRF1-215ENST00000549655 PHACTR3Q96KR7 559 aa24.85■■□□□ 1.57
BRF1-215ENST00000549655 PIK3C2AO00443 1686 aa24.85■■□□□ 1.57
BRF1-215ENST00000549655 IL16Q14005 1332 aa24.84■■□□□ 1.57
BRF1-215ENST00000549655 PHF8Q9UPP1 1060 aa24.84■■□□□ 1.57
BRF1-215ENST00000549655 EIF4A2Q14240 407 aaKnown RBP24.84■■□□□ 1.57
BRF1-215ENST00000549655 PEAK1Q9H792 1746 aa24.83■■□□□ 1.57
BRF1-215ENST00000549655 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
BRF1-215ENST00000549655 FANCIQ9NVI1 1328 aa24.82■■□□□ 1.56
BRF1-215ENST00000549655 RARSP54136 660 aaKnown RBP24.82■■□□□ 1.56
BRF1-215ENST00000549655 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
BRF1-215ENST00000549655 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
BRF1-215ENST00000549655 NLRP6P59044 892 aa24.81■■□□□ 1.56
BRF1-215ENST00000549655 HSP90AB2PQ58FF8 381 aa24.81■■□□□ 1.56
BRF1-215ENST00000549655 TSR2Q969E8 191 aaKnown RBP24.81■■□□□ 1.56
BRF1-215ENST00000549655 MAP3K19Q56UN5 1328 aa24.8■■□□□ 1.56
BRF1-215ENST00000549655 PAK3O75914 559 aaPredicted RBP24.78■■□□□ 1.56
BRF1-215ENST00000549655 ESCO1Q5FWF5 840 aa24.78■■□□□ 1.56
BRF1-215ENST00000549655 ABTB2Q8N961 1025 aa24.78■■□□□ 1.56
BRF1-215ENST00000549655 NUTM2GQ5VZR2 741 aa24.77■■□□□ 1.56
BRF1-215ENST00000549655 SBNO1A3KN83 1393 aa24.76■■□□□ 1.56
BRF1-215ENST00000549655 CT47B1P0C2W7 299 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms