RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 GLI3P10071 1580 aa28.07■■■□□ 2.08
ATF1-202ENST00000549612 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
ATF1-202ENST00000549612 PAK3O75914 559 aaPredicted RBP28.06■■■□□ 2.08
ATF1-202ENST00000549612 ACEP12821 1306 aa28.05■■■□□ 2.08
ATF1-202ENST00000549612 VPS72Q15906 364 aa28.05■■■□□ 2.08
ATF1-202ENST00000549612 QRICH2Q9H0J4 1663 aa28.05■■■□□ 2.08
ATF1-202ENST00000549612 CRYBG1Q9Y4K1 1723 aa28.05■■■□□ 2.08
ATF1-202ENST00000549612 ROCK2O75116 1388 aaKnown RBP28.02■■■□□ 2.08
ATF1-202ENST00000549612 SRPK2P78362 688 aaKnown RBP28.02■■■□□ 2.08
ATF1-202ENST00000549612 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
ATF1-202ENST00000549612 COL14A1Q05707 1796 aaKnown RBP28■■■□□ 2.07
ATF1-202ENST00000549612 PPIP5K1Q6PFW1 1433 aa28■■■□□ 2.07
ATF1-202ENST00000549612 EP400Q96L91 3159 aa27.99■■■□□ 2.07
ATF1-202ENST00000549612 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
ATF1-202ENST00000549612 NRAPQ86VF7 1730 aa27.98■■■□□ 2.07
ATF1-202ENST00000549612 TRIM26Q12899 539 aaPredicted RBP27.98■■■□□ 2.07
ATF1-202ENST00000549612 BTG4Q9NY30 223 aa27.96■■■□□ 2.07
ATF1-202ENST00000549612 ONECUT3O60422 494 aaPredicted RBP27.95■■■□□ 2.06
ATF1-202ENST00000549612 PHRF1Q9P1Y6 1649 aaKnown RBP27.94■■■□□ 2.06
ATF1-202ENST00000549612 EVC2Q86UK5 1308 aa27.93■■■□□ 2.06
ATF1-202ENST00000549612 PRDM11Q9NQV5 511 aa27.93■■■□□ 2.06
ATF1-202ENST00000549612 CCDC9Q9Y3X0 531 aaKnown RBP27.93■■■□□ 2.06
ATF1-202ENST00000549612 BRD4O60885 1362 aaPredicted RBP27.92■■■□□ 2.06
ATF1-202ENST00000549612 SEPT12Q8IYM1 358 aa27.92■■■□□ 2.06
ATF1-202ENST00000549612 KIAA0232Q92628 1395 aa27.91■■■□□ 2.06
ATF1-202ENST00000549612 NUTM2GQ5VZR2 741 aa27.91■■■□□ 2.06
ATF1-202ENST00000549612 TONSLQ96HA7 1378 aa27.9■■■□□ 2.06
ATF1-202ENST00000549612 ABTB2Q8N961 1025 aa27.9■■■□□ 2.06
ATF1-202ENST00000549612 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
ATF1-202ENST00000549612 USP19O94966 1318 aa27.9■■■□□ 2.06
ATF1-202ENST00000549612 USP6P35125 1406 aa27.88■■■□□ 2.05
ATF1-202ENST00000549612 CCDC125Q86Z20 511 aa27.88■■■□□ 2.05
ATF1-202ENST00000549612 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
ATF1-202ENST00000549612 BRWD3Q6RI45 1802 aa27.87■■■□□ 2.05
ATF1-202ENST00000549612 SPATA31A5Q5VU36 1347 aa27.86■■■□□ 2.05
ATF1-202ENST00000549612 SPATA31A7Q8IWB4 1347 aa27.86■■■□□ 2.05
ATF1-202ENST00000549612 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
ATF1-202ENST00000549612 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
ATF1-202ENST00000549612 CHRNA2Q15822 529 aa27.84■■■□□ 2.05
ATF1-202ENST00000549612 CPDO75976 1380 aa27.84■■■□□ 2.05
ATF1-202ENST00000549612 SSH2Q76I76 1423 aa27.84■■■□□ 2.05
ATF1-202ENST00000549612 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
ATF1-202ENST00000549612 CARD11Q9BXL7 1154 aa27.83■■■□□ 2.05
ATF1-202ENST00000549612 FAM98CQ17RN3 349 aaKnown RBP27.82■■■□□ 2.04
ATF1-202ENST00000549612 KRT27Q7Z3Y8 459 aa27.81■■■□□ 2.04
ATF1-202ENST00000549612 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
ATF1-202ENST00000549612 GCP02774 474 aa27.78■■■□□ 2.04
ATF1-202ENST00000549612 SPATA31A1Q5TZJ5 1347 aa27.77■■■□□ 2.04
ATF1-202ENST00000549612 A0A0G2JS52 829 aa27.77■■■□□ 2.04
ATF1-202ENST00000549612 MYT1Q01538 1121 aa27.77■■■□□ 2.04
ATF1-202ENST00000549612 LMO7Q8WWI1 1683 aa27.77■■■□□ 2.04
ATF1-202ENST00000549612 THSD7AQ9UPZ6 1657 aa27.77■■■□□ 2.04
ATF1-202ENST00000549612 ZNF692Q9BU19 519 aaPredicted RBP27.76■■■□□ 2.03
ATF1-202ENST00000549612 SLIT3O75094 1523 aa27.76■■■□□ 2.03
ATF1-202ENST00000549612 CAMTA1Q9Y6Y1 1673 aa27.75■■■□□ 2.03
ATF1-202ENST00000549612 STRN4Q9NRL3 753 aa27.75■■■□□ 2.03
ATF1-202ENST00000549612 CPSF1Q10570 1443 aaKnown RBP27.75■■■□□ 2.03
ATF1-202ENST00000549612 PIK3C2AO00443 1686 aa27.75■■■□□ 2.03
ATF1-202ENST00000549612 NLRP6P59044 892 aa27.74■■■□□ 2.03
ATF1-202ENST00000549612 AKAP12Q02952 1782 aa27.73■■■□□ 2.03
ATF1-202ENST00000549612 TTC21BQ7Z4L5 1316 aa27.71■■■□□ 2.03
ATF1-202ENST00000549612 EVA1CP58658 441 aa27.7■■■□□ 2.02
ATF1-202ENST00000549612 TTC21AQ8NDW8 1320 aa27.69■■■□□ 2.02
ATF1-202ENST00000549612 LARP1Q6PKG0 1096 aaKnown RBP27.68■■■□□ 2.02
ATF1-202ENST00000549612 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
ATF1-202ENST00000549612 COL5A2P05997 1499 aaPredicted RBP27.68■■■□□ 2.02
ATF1-202ENST00000549612 SF3B2Q13435 895 aaKnown RBP27.67■■■□□ 2.02
ATF1-202ENST00000549612 BARGINQ6ZT62 677 aa27.67■■■□□ 2.02
ATF1-202ENST00000549612 AATKQ6ZMQ8 1374 aa27.67■■■□□ 2.02
ATF1-202ENST00000549612 CD163L1Q9NR16 1453 aa27.65■■■□□ 2.02
ATF1-202ENST00000549612 MON2Q7Z3U7 1717 aa27.64■■■□□ 2.02
ATF1-202ENST00000549612 DEFB132Q7Z7B7 95 aa27.64■■■□□ 2.02
ATF1-202ENST00000549612 PUS7Q96PZ0 661 aaKnown RBP27.64■■■□□ 2.02
ATF1-202ENST00000549612 USP35Q9P2H5 1018 aa27.64■■■□□ 2.02
ATF1-202ENST00000549612 TCP11L2Q8N4U5 519 aa27.63■■■□□ 2.01
ATF1-202ENST00000549612 ZRANB1Q9UGI0 708 aa27.63■■■□□ 2.01
ATF1-202ENST00000549612 TESK2Q96S53 571 aa27.62■■■□□ 2.01
ATF1-202ENST00000549612 FAM182BQ5T319 152 aa27.61■■■□□ 2.01
ATF1-202ENST00000549612 KCNH5Q8NCM2 988 aa27.61■■■□□ 2.01
ATF1-202ENST00000549612 THRAP3Q9Y2W1 955 aaKnown RBP27.61■■■□□ 2.01
ATF1-202ENST00000549612 ZBTB7CA1YPR0 619 aa27.6■■■□□ 2.01
ATF1-202ENST00000549612 COL18A1P39060 1754 aa27.6■■■□□ 2.01
ATF1-202ENST00000549612 CRB1P82279 1406 aa27.59■■■□□ 2.01
ATF1-202ENST00000549612 ST20-MTHFSA0A0A6YYL1 179 aa27.59■■■□□ 2.01
ATF1-202ENST00000549612 ARHGEF25Q86VW2 580 aa27.59■■■□□ 2.01
ATF1-202ENST00000549612 NFAT5O94916 1531 aa27.58■■■□□ 2.01
ATF1-202ENST00000549612 TMC1Q8TDI8 760 aa27.58■■■□□ 2.01
ATF1-202ENST00000549612 SLC12A5Q9H2X9 1139 aa27.58■■■□□ 2.01
ATF1-202ENST00000549612 SRCAPQ6ZRS2 3230 aa27.58■■■□□ 2.01
ATF1-202ENST00000549612 USP31Q70CQ4 1352 aa27.58■■■□□ 2.01
ATF1-202ENST00000549612 HDGFL2Q7Z4V5 671 aaPredicted RBP27.57■■■□□ 2
ATF1-202ENST00000549612 RGPD1P0DJD0 1748 aa27.56■■■□□ 2
ATF1-202ENST00000549612 SLC24A1O60721 1099 aa27.56■■■□□ 2
ATF1-202ENST00000549612 BAG6P46379 1132 aa27.56■■■□□ 2
ATF1-202ENST00000549612 USP54Q70EL1 1684 aa27.56■■■□□ 2
ATF1-202ENST00000549612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.55■■■□□ 2
ATF1-202ENST00000549612 AXIN2Q9Y2T1 843 aa27.55■■■□□ 2
ATF1-202ENST00000549612 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
ATF1-202ENST00000549612 A0A1W2PP64 1363 aa27.54■■■□□ 2
ATF1-202ENST00000549612 FAM196AQ6ZSG2 479 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms