RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MEX3CQ5U5Q3 659 aaKnown RBP24.11■■□□□ 1.45
HDAC7-227ENST00000548080 USP6P35125 1406 aa24.1■■□□□ 1.45
HDAC7-227ENST00000548080 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
HDAC7-227ENST00000548080 CD163L1Q9NR16 1453 aa24.1■■□□□ 1.45
HDAC7-227ENST00000548080 ABCA3Q99758 1704 aa24.09■■□□□ 1.45
HDAC7-227ENST00000548080 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
HDAC7-227ENST00000548080 SLC24A1O60721 1099 aa24.07■■□□□ 1.44
HDAC7-227ENST00000548080 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
HDAC7-227ENST00000548080 KTN1Q86UP2 1357 aaKnown RBP24.07■■□□□ 1.44
HDAC7-227ENST00000548080 CPSF1Q10570 1443 aaKnown RBP24.07■■□□□ 1.44
HDAC7-227ENST00000548080 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
HDAC7-227ENST00000548080 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
HDAC7-227ENST00000548080 PUS7Q96PZ0 661 aaKnown RBP24.07■■□□□ 1.44
HDAC7-227ENST00000548080 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
HDAC7-227ENST00000548080 MYOM1P52179 1685 aa24.06■■□□□ 1.44
HDAC7-227ENST00000548080 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
HDAC7-227ENST00000548080 HAP1P54257 671 aaPredicted RBP24.05■■□□□ 1.44
HDAC7-227ENST00000548080 A0A1W2PP64 1363 aa24.05■■□□□ 1.44
HDAC7-227ENST00000548080 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
HDAC7-227ENST00000548080 C8orf37Q96NL8 207 aa24.04■■□□□ 1.44
HDAC7-227ENST00000548080 CCDC7Q96M83 1385 aa24.04■■□□□ 1.44
HDAC7-227ENST00000548080 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
HDAC7-227ENST00000548080 HDGFL2Q7Z4V5 671 aaPredicted RBP24.03■■□□□ 1.44
HDAC7-227ENST00000548080 ABTB2Q8N961 1025 aa24.03■■□□□ 1.44
HDAC7-227ENST00000548080 SSH2Q76I76 1423 aa24.03■■□□□ 1.44
HDAC7-227ENST00000548080 PIK3C2AO00443 1686 aa24.02■■□□□ 1.44
HDAC7-227ENST00000548080 TTC21BQ7Z4L5 1316 aa24.02■■□□□ 1.44
HDAC7-227ENST00000548080 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
HDAC7-227ENST00000548080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
HDAC7-227ENST00000548080 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
HDAC7-227ENST00000548080 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
HDAC7-227ENST00000548080 KIF7Q2M1P5 1343 aa24.01■■□□□ 1.43
HDAC7-227ENST00000548080 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
HDAC7-227ENST00000548080 RGS17Q9UGC6 210 aaPredicted RBP24■■□□□ 1.43
HDAC7-227ENST00000548080 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
HDAC7-227ENST00000548080 NINLQ9Y2I6 1382 aa23.99■■□□□ 1.43
HDAC7-227ENST00000548080 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
HDAC7-227ENST00000548080 AFF2P51816 1311 aa23.97■■□□□ 1.43
HDAC7-227ENST00000548080 NLRP6P59044 892 aa23.97■■□□□ 1.43
HDAC7-227ENST00000548080 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
HDAC7-227ENST00000548080 BRD4O60885 1362 aaPredicted RBP23.97■■□□□ 1.43
HDAC7-227ENST00000548080 NME9Q86XW9 330 aa23.96■■□□□ 1.43
HDAC7-227ENST00000548080 ANKRD36BQ8N2N9 1353 aa23.96■■□□□ 1.43
HDAC7-227ENST00000548080 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
HDAC7-227ENST00000548080 TTC21AQ8NDW8 1320 aa23.94■■□□□ 1.42
HDAC7-227ENST00000548080 NLRP13Q86W25 1043 aa23.93■■□□□ 1.42
HDAC7-227ENST00000548080 USP19O94966 1318 aa23.92■■□□□ 1.42
HDAC7-227ENST00000548080 SOX12O15370 315 aa23.92■■□□□ 1.42
HDAC7-227ENST00000548080 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
HDAC7-227ENST00000548080 POTEAQ6S8J7 498 aa23.92■■□□□ 1.42
HDAC7-227ENST00000548080 PLCH1Q4KWH8 1693 aa23.9■■□□□ 1.42
HDAC7-227ENST00000548080 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.42
HDAC7-227ENST00000548080 FAM83GA6ND36 823 aa23.89■■□□□ 1.42
HDAC7-227ENST00000548080 CARD14Q9BXL6 1004 aa23.89■■□□□ 1.42
HDAC7-227ENST00000548080 KIAA0232Q92628 1395 aa23.89■■□□□ 1.41
HDAC7-227ENST00000548080 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
HDAC7-227ENST00000548080 NSD3Q9BZ95 1437 aa23.88■■□□□ 1.41
HDAC7-227ENST00000548080 SLIT3O75094 1523 aa23.88■■□□□ 1.41
HDAC7-227ENST00000548080 GCP02774 474 aa23.87■■□□□ 1.41
HDAC7-227ENST00000548080 PRDM11Q9NQV5 511 aa23.87■■□□□ 1.41
HDAC7-227ENST00000548080 USP21Q9UK80 565 aa23.87■■□□□ 1.41
HDAC7-227ENST00000548080 ILDR2Q71H61 639 aa23.86■■□□□ 1.41
HDAC7-227ENST00000548080 MIER1Q8N108 512 aa23.86■■□□□ 1.41
HDAC7-227ENST00000548080 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
HDAC7-227ENST00000548080 KIF20BQ96Q89 1820 aa23.85■■□□□ 1.41
HDAC7-227ENST00000548080 BCL9LQ86UU0 1499 aa23.84■■□□□ 1.41
HDAC7-227ENST00000548080 COL14A1Q05707 1796 aaKnown RBP23.84■■□□□ 1.41
HDAC7-227ENST00000548080 SLIT2O94813 1529 aa23.84■■□□□ 1.41
HDAC7-227ENST00000548080 ZNF772Q68DY9 489 aaPredicted RBP23.84■■□□□ 1.41
HDAC7-227ENST00000548080 PANK3Q9H999 370 aa23.84■■□□□ 1.41
HDAC7-227ENST00000548080 USP54Q70EL1 1684 aa23.84■■□□□ 1.41
HDAC7-227ENST00000548080 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.41
HDAC7-227ENST00000548080 USP31Q70CQ4 1352 aa23.83■■□□□ 1.41
HDAC7-227ENST00000548080 OVOS2A0A0J9YW53 1432 aa23.82■■□□□ 1.4
HDAC7-227ENST00000548080 OVOS2Q6IE36 1432 aa23.82■■□□□ 1.4
HDAC7-227ENST00000548080 QTRT2Q9H974 415 aaKnown RBP23.81■■□□□ 1.4
HDAC7-227ENST00000548080 BTG4Q9NY30 223 aa23.81■■□□□ 1.4
HDAC7-227ENST00000548080 NFAT5O94916 1531 aa23.81■■□□□ 1.4
HDAC7-227ENST00000548080 FYB1O15117 783 aa23.81■■□□□ 1.4
HDAC7-227ENST00000548080 NRAPQ86VF7 1730 aa23.8■■□□□ 1.4
HDAC7-227ENST00000548080 NWD2Q9ULI1 1742 aa23.8■■□□□ 1.4
HDAC7-227ENST00000548080 FBLN1P23142 703 aa23.79■■□□□ 1.4
HDAC7-227ENST00000548080 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
HDAC7-227ENST00000548080 UNC5CLQ8IV45 518 aa23.78■■□□□ 1.4
HDAC7-227ENST00000548080 COG3Q96JB2 828 aa23.78■■□□□ 1.4
HDAC7-227ENST00000548080 ATRNO75882 1429 aa23.77■■□□□ 1.4
HDAC7-227ENST00000548080 CPDO75976 1380 aa23.77■■□□□ 1.4
HDAC7-227ENST00000548080 LMO7Q8WWI1 1683 aa23.77■■□□□ 1.4
HDAC7-227ENST00000548080 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
HDAC7-227ENST00000548080 LTN1O94822 1766 aa23.76■■□□□ 1.39
HDAC7-227ENST00000548080 ANP32CO43423 234 aa23.75■■□□□ 1.39
HDAC7-227ENST00000548080 STRN4Q9NRL3 753 aa23.75■■□□□ 1.39
HDAC7-227ENST00000548080 TRPC5Q9UL62 973 aaPredicted RBP23.75■■□□□ 1.39
HDAC7-227ENST00000548080 CAMTA1Q9Y6Y1 1673 aa23.75■■□□□ 1.39
HDAC7-227ENST00000548080 RGPD5Q99666 1765 aa23.75■■□□□ 1.39
HDAC7-227ENST00000548080 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
HDAC7-227ENST00000548080 COL18A1P39060 1754 aa23.74■■□□□ 1.39
HDAC7-227ENST00000548080 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
HDAC7-227ENST00000548080 CGNL1Q0VF96 1302 aa23.73■■□□□ 1.39
HDAC7-227ENST00000548080 RXRBP28702 533 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms