RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAB5B-204ENST00000548068 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
RAB5B-204ENST00000548068 TMEM94Q12767 1356 aa16.56■□□□□ 0.24
RAB5B-204ENST00000548068 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
RAB5B-204ENST00000548068 COG3Q96JB2 828 aa16.55■□□□□ 0.24
RAB5B-204ENST00000548068 USP54Q70EL1 1684 aa16.55■□□□□ 0.24
RAB5B-204ENST00000548068 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
RAB5B-204ENST00000548068 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
RAB5B-204ENST00000548068 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
RAB5B-204ENST00000548068 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
RAB5B-204ENST00000548068 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
RAB5B-204ENST00000548068 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
RAB5B-204ENST00000548068 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
RAB5B-204ENST00000548068 MSH6P52701 1360 aa16.53■□□□□ 0.24
RAB5B-204ENST00000548068 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
RAB5B-204ENST00000548068 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
RAB5B-204ENST00000548068 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
RAB5B-204ENST00000548068 ATF3P18847 181 aa16.52■□□□□ 0.24
RAB5B-204ENST00000548068 NME9Q86XW9 330 aa16.52■□□□□ 0.24
RAB5B-204ENST00000548068 RBM33Q96EV2 1170 aaKnown RBP16.52■□□□□ 0.24
RAB5B-204ENST00000548068 OVOS2A0A0J9YW53 1432 aa16.52■□□□□ 0.23
RAB5B-204ENST00000548068 OVOS2Q6IE36 1432 aa16.52■□□□□ 0.23
RAB5B-204ENST00000548068 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
RAB5B-204ENST00000548068 PIK3C2AO00443 1686 aa16.51■□□□□ 0.23
RAB5B-204ENST00000548068 C1orf167Q5SNV9 1468 aa16.51■□□□□ 0.23
RAB5B-204ENST00000548068 MTHFSP49914 203 aa16.51■□□□□ 0.23
RAB5B-204ENST00000548068 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
RAB5B-204ENST00000548068 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
RAB5B-204ENST00000548068 USP31Q70CQ4 1352 aa16.5■□□□□ 0.23
RAB5B-204ENST00000548068 MST1RQ04912 1400 aa16.49■□□□□ 0.23
RAB5B-204ENST00000548068 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
RAB5B-204ENST00000548068 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
RAB5B-204ENST00000548068 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
RAB5B-204ENST00000548068 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
RAB5B-204ENST00000548068 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
RAB5B-204ENST00000548068 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
RAB5B-204ENST00000548068 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
RAB5B-204ENST00000548068 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
RAB5B-204ENST00000548068 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
RAB5B-204ENST00000548068 PSME1Q06323 249 aa16.44■□□□□ 0.22
RAB5B-204ENST00000548068 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
RAB5B-204ENST00000548068 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
RAB5B-204ENST00000548068 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
RAB5B-204ENST00000548068 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
RAB5B-204ENST00000548068 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
RAB5B-204ENST00000548068 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
RAB5B-204ENST00000548068 NLRP6P59044 892 aa16.4■□□□□ 0.22
RAB5B-204ENST00000548068 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
RAB5B-204ENST00000548068 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
RAB5B-204ENST00000548068 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
RAB5B-204ENST00000548068 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
RAB5B-204ENST00000548068 ALS2Q96Q42 1657 aa16.39■□□□□ 0.21
RAB5B-204ENST00000548068 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
RAB5B-204ENST00000548068 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
RAB5B-204ENST00000548068 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
RAB5B-204ENST00000548068 FOXO3O43524 673 aa16.37■□□□□ 0.21
RAB5B-204ENST00000548068 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
RAB5B-204ENST00000548068 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
RAB5B-204ENST00000548068 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
RAB5B-204ENST00000548068 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
RAB5B-204ENST00000548068 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
RAB5B-204ENST00000548068 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
RAB5B-204ENST00000548068 SLIT3O75094 1523 aa16.36■□□□□ 0.21
RAB5B-204ENST00000548068 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
RAB5B-204ENST00000548068 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
RAB5B-204ENST00000548068 PHRF1Q9P1Y6 1649 aaKnown RBP16.36■□□□□ 0.21
RAB5B-204ENST00000548068 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
RAB5B-204ENST00000548068 FLT4P35916 1363 aa16.36■□□□□ 0.21
RAB5B-204ENST00000548068 LTN1O94822 1766 aa16.36■□□□□ 0.21
RAB5B-204ENST00000548068 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
RAB5B-204ENST00000548068 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
RAB5B-204ENST00000548068 NFAT5O94916 1531 aa16.35■□□□□ 0.21
RAB5B-204ENST00000548068 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
RAB5B-204ENST00000548068 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
RAB5B-204ENST00000548068 PXDNQ92626 1479 aa16.34■□□□□ 0.21
RAB5B-204ENST00000548068 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
RAB5B-204ENST00000548068 NEFMP07197 916 aa16.33■□□□□ 0.2
RAB5B-204ENST00000548068 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
RAB5B-204ENST00000548068 MAP3K19Q56UN5 1328 aa16.33■□□□□ 0.2
RAB5B-204ENST00000548068 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
RAB5B-204ENST00000548068 FCHSD2O94868 740 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 USP19O94966 1318 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 FBLN1P23142 703 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 AMPHP49418 695 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 NHSL1Q5SYE7 1610 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 MAPK8IP3Q9UPT6 1336 aa16.32■□□□□ 0.2
RAB5B-204ENST00000548068 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 MED1Q15648 1581 aaPredicted RBP16.31■□□□□ 0.2
RAB5B-204ENST00000548068 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 APAF1O14727 1248 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 IL13P35225 146 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
RAB5B-204ENST00000548068 SOX12O15370 315 aa16.3■□□□□ 0.2
RAB5B-204ENST00000548068 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
RAB5B-204ENST00000548068 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
RAB5B-204ENST00000548068 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
RAB5B-204ENST00000548068 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
RAB5B-204ENST00000548068 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
RAB5B-204ENST00000548068 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms