RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 TOPAZ1Q8N9V7 1692 aa26.7■■□□□ 1.87
CHMP1A-203ENST00000547614 NBPF8Q3BBV2 869 aa26.7■■□□□ 1.86
CHMP1A-203ENST00000547614 FAM83GA6ND36 823 aa26.68■■□□□ 1.86
CHMP1A-203ENST00000547614 QRICH2Q9H0J4 1663 aa26.67■■□□□ 1.86
CHMP1A-203ENST00000547614 NWD2Q9ULI1 1742 aa26.67■■□□□ 1.86
CHMP1A-203ENST00000547614 VPS72Q15906 364 aa26.66■■□□□ 1.86
CHMP1A-203ENST00000547614 CABP2Q9NPB3 220 aa26.66■■□□□ 1.86
CHMP1A-203ENST00000547614 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
CHMP1A-203ENST00000547614 ATAD2Q6PL18 1390 aa26.64■■□□□ 1.86
CHMP1A-203ENST00000547614 PPIP5K1Q6PFW1 1433 aa26.64■■□□□ 1.85
CHMP1A-203ENST00000547614 EVC2Q86UK5 1308 aa26.64■■□□□ 1.85
CHMP1A-203ENST00000547614 PLCH1Q4KWH8 1693 aa26.63■■□□□ 1.85
CHMP1A-203ENST00000547614 TONSLQ96HA7 1378 aa26.62■■□□□ 1.85
CHMP1A-203ENST00000547614 GLI3P10071 1580 aa26.62■■□□□ 1.85
CHMP1A-203ENST00000547614 CRYBG1Q9Y4K1 1723 aa26.61■■□□□ 1.85
CHMP1A-203ENST00000547614 BRD4O60885 1362 aaPredicted RBP26.6■■□□□ 1.85
CHMP1A-203ENST00000547614 BTG4Q9NY30 223 aa26.59■■□□□ 1.85
CHMP1A-203ENST00000547614 COL14A1Q05707 1796 aaKnown RBP26.58■■□□□ 1.85
CHMP1A-203ENST00000547614 ONECUT3O60422 494 aaPredicted RBP26.58■■□□□ 1.85
CHMP1A-203ENST00000547614 CABP1Q9NZU7 370 aa26.58■■□□□ 1.85
CHMP1A-203ENST00000547614 ABTB2Q8N961 1025 aa26.57■■□□□ 1.84
CHMP1A-203ENST00000547614 PRDM11Q9NQV5 511 aa26.57■■□□□ 1.84
CHMP1A-203ENST00000547614 CCDC9Q9Y3X0 531 aaKnown RBP26.57■■□□□ 1.84
CHMP1A-203ENST00000547614 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
CHMP1A-203ENST00000547614 NUTM2GQ5VZR2 741 aa26.55■■□□□ 1.84
CHMP1A-203ENST00000547614 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
CHMP1A-203ENST00000547614 SEPT12Q8IYM1 358 aa26.53■■□□□ 1.84
CHMP1A-203ENST00000547614 KIAA0232Q92628 1395 aa26.53■■□□□ 1.84
CHMP1A-203ENST00000547614 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
CHMP1A-203ENST00000547614 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
CHMP1A-203ENST00000547614 CCDC125Q86Z20 511 aa26.52■■□□□ 1.84
CHMP1A-203ENST00000547614 PHRF1Q9P1Y6 1649 aaKnown RBP26.51■■□□□ 1.83
CHMP1A-203ENST00000547614 USP6P35125 1406 aa26.51■■□□□ 1.83
CHMP1A-203ENST00000547614 USP19O94966 1318 aa26.51■■□□□ 1.83
CHMP1A-203ENST00000547614 ZC3H6P61129 1189 aaKnown RBP26.5■■□□□ 1.83
CHMP1A-203ENST00000547614 ZNF692Q9BU19 519 aaPredicted RBP26.5■■□□□ 1.83
CHMP1A-203ENST00000547614 SPATA31A5Q5VU36 1347 aa26.47■■□□□ 1.83
CHMP1A-203ENST00000547614 SPATA31A7Q8IWB4 1347 aa26.47■■□□□ 1.83
CHMP1A-203ENST00000547614 CHRNA2Q15822 529 aa26.47■■□□□ 1.83
CHMP1A-203ENST00000547614 EP400Q96L91 3159 aa26.47■■□□□ 1.83
CHMP1A-203ENST00000547614 SSH2Q76I76 1423 aa26.47■■□□□ 1.83
CHMP1A-203ENST00000547614 CPDO75976 1380 aa26.46■■□□□ 1.83
CHMP1A-203ENST00000547614 GCP02774 474 aa26.46■■□□□ 1.83
CHMP1A-203ENST00000547614 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
CHMP1A-203ENST00000547614 NLRP6P59044 892 aa26.44■■□□□ 1.82
CHMP1A-203ENST00000547614 FAM98CQ17RN3 349 aaKnown RBP26.44■■□□□ 1.82
CHMP1A-203ENST00000547614 NRKQ7Z2Y5 1582 aa26.43■■□□□ 1.82
CHMP1A-203ENST00000547614 KRT27Q7Z3Y8 459 aa26.43■■□□□ 1.82
CHMP1A-203ENST00000547614 CPSF1Q10570 1443 aaKnown RBP26.41■■□□□ 1.82
CHMP1A-203ENST00000547614 A0A0G2JS52 829 aa26.4■■□□□ 1.82
CHMP1A-203ENST00000547614 MYT1Q01538 1121 aa26.4■■□□□ 1.82
CHMP1A-203ENST00000547614 SPATA31A1Q5TZJ5 1347 aa26.39■■□□□ 1.82
CHMP1A-203ENST00000547614 TTC21BQ7Z4L5 1316 aa26.39■■□□□ 1.82
CHMP1A-203ENST00000547614 EVA1CP58658 441 aa26.39■■□□□ 1.82
CHMP1A-203ENST00000547614 PUS7Q96PZ0 661 aaKnown RBP26.39■■□□□ 1.82
CHMP1A-203ENST00000547614 STRN4Q9NRL3 753 aa26.39■■□□□ 1.82
CHMP1A-203ENST00000547614 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.81
CHMP1A-203ENST00000547614 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.81
CHMP1A-203ENST00000547614 AKAP12Q02952 1782 aa26.38■■□□□ 1.81
CHMP1A-203ENST00000547614 SLC24A1O60721 1099 aa26.37■■□□□ 1.81
CHMP1A-203ENST00000547614 CAMTA1Q9Y6Y1 1673 aa26.37■■□□□ 1.81
CHMP1A-203ENST00000547614 KTN1Q86UP2 1357 aaKnown RBP26.36■■□□□ 1.81
CHMP1A-203ENST00000547614 SLIT3O75094 1523 aa26.36■■□□□ 1.81
CHMP1A-203ENST00000547614 LMO7Q8WWI1 1683 aa26.35■■□□□ 1.81
CHMP1A-203ENST00000547614 CLSPNQ9HAW4 1339 aa26.35■■□□□ 1.81
CHMP1A-203ENST00000547614 PIK3C2AO00443 1686 aa26.34■■□□□ 1.81
CHMP1A-203ENST00000547614 TIMELESSQ9UNS1 1208 aa26.34■■□□□ 1.81
CHMP1A-203ENST00000547614 AATKQ6ZMQ8 1374 aa26.33■■□□□ 1.8
CHMP1A-203ENST00000547614 THSD7AQ9UPZ6 1657 aa26.32■■□□□ 1.8
CHMP1A-203ENST00000547614 ST20-MTHFSA0A0A6YYL1 179 aa26.32■■□□□ 1.8
CHMP1A-203ENST00000547614 BARGINQ6ZT62 677 aa26.32■■□□□ 1.8
CHMP1A-203ENST00000547614 KCNH5Q8NCM2 988 aa26.32■■□□□ 1.8
CHMP1A-203ENST00000547614 TESK2Q96S53 571 aa26.32■■□□□ 1.8
CHMP1A-203ENST00000547614 SF3B2Q13435 895 aaKnown RBP26.31■■□□□ 1.8
CHMP1A-203ENST00000547614 LARP1Q6PKG0 1096 aaKnown RBP26.31■■□□□ 1.8
CHMP1A-203ENST00000547614 TMC1Q8TDI8 760 aa26.3■■□□□ 1.8
CHMP1A-203ENST00000547614 HDGFL2Q7Z4V5 671 aaPredicted RBP26.29■■□□□ 1.8
CHMP1A-203ENST00000547614 SLC12A5Q9H2X9 1139 aa26.29■■□□□ 1.8
CHMP1A-203ENST00000547614 CD163L1Q9NR16 1453 aa26.29■■□□□ 1.8
CHMP1A-203ENST00000547614 MON2Q7Z3U7 1717 aa26.28■■□□□ 1.8
CHMP1A-203ENST00000547614 TCP11L2Q8N4U5 519 aa26.28■■□□□ 1.8
CHMP1A-203ENST00000547614 USP35Q9P2H5 1018 aa26.28■■□□□ 1.8
CHMP1A-203ENST00000547614 THRAP3Q9Y2W1 955 aaKnown RBP26.28■■□□□ 1.8
CHMP1A-203ENST00000547614 COL5A2P05997 1499 aaPredicted RBP26.28■■□□□ 1.8
CHMP1A-203ENST00000547614 ARHGEF25Q86VW2 580 aa26.27■■□□□ 1.8
CHMP1A-203ENST00000547614 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CHMP1A-203ENST00000547614 TERF2IPQ9NYB0 399 aa26.27■■□□□ 1.8
CHMP1A-203ENST00000547614 USP31Q70CQ4 1352 aa26.25■■□□□ 1.79
CHMP1A-203ENST00000547614 ZBTB7CA1YPR0 619 aa26.25■■□□□ 1.79
CHMP1A-203ENST00000547614 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
CHMP1A-203ENST00000547614 NINLQ9Y2I6 1382 aa26.24■■□□□ 1.79
CHMP1A-203ENST00000547614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.24■■□□□ 1.79
CHMP1A-203ENST00000547614 CRB1P82279 1406 aa26.23■■□□□ 1.79
CHMP1A-203ENST00000547614 DEFB132Q7Z7B7 95 aa26.23■■□□□ 1.79
CHMP1A-203ENST00000547614 COL18A1P39060 1754 aa26.23■■□□□ 1.79
CHMP1A-203ENST00000547614 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
CHMP1A-203ENST00000547614 FAM182BQ5T319 152 aa26.22■■□□□ 1.79
CHMP1A-203ENST00000547614 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
CHMP1A-203ENST00000547614 USP47Q96K76 1375 aa26.21■■□□□ 1.79
CHMP1A-203ENST00000547614 FAM196AQ6ZSG2 479 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms