RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SRPK2P78362 688 aaKnown RBP23.99■■□□□ 1.43
RBFOX1-207ENST00000547338 SBNO2Q9Y2G9 1366 aa23.98■■□□□ 1.43
RBFOX1-207ENST00000547338 LMOD2Q6P5Q4 547 aa23.97■■□□□ 1.43
RBFOX1-207ENST00000547338 SLIT2O94813 1529 aa23.96■■□□□ 1.43
RBFOX1-207ENST00000547338 QTRT2Q9H974 415 aaKnown RBP23.95■■□□□ 1.43
RBFOX1-207ENST00000547338 EVC2Q86UK5 1308 aa23.95■■□□□ 1.42
RBFOX1-207ENST00000547338 ATRNO75882 1429 aa23.95■■□□□ 1.42
RBFOX1-207ENST00000547338 USP21Q9UK80 565 aa23.94■■□□□ 1.42
RBFOX1-207ENST00000547338 PLEKHG5O94827 1062 aa23.94■■□□□ 1.42
RBFOX1-207ENST00000547338 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
RBFOX1-207ENST00000547338 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
RBFOX1-207ENST00000547338 RXRBP28702 533 aa23.93■■□□□ 1.42
RBFOX1-207ENST00000547338 PLCH1Q4KWH8 1693 aa23.92■■□□□ 1.42
RBFOX1-207ENST00000547338 CABP1Q9NZU7 370 aa23.92■■□□□ 1.42
RBFOX1-207ENST00000547338 RGS12O14924 1447 aa23.91■■□□□ 1.42
RBFOX1-207ENST00000547338 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
RBFOX1-207ENST00000547338 PHRF1Q9P1Y6 1649 aaKnown RBP23.9■■□□□ 1.42
RBFOX1-207ENST00000547338 SSH2Q76I76 1423 aa23.89■■□□□ 1.42
RBFOX1-207ENST00000547338 USP6P35125 1406 aa23.89■■□□□ 1.41
RBFOX1-207ENST00000547338 RBM6P78332 1123 aaKnown RBP23.88■■□□□ 1.41
RBFOX1-207ENST00000547338 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
RBFOX1-207ENST00000547338 DDX10Q13206 875 aaKnown RBP23.88■■□□□ 1.41
RBFOX1-207ENST00000547338 TESK2Q96S53 571 aa23.88■■□□□ 1.41
RBFOX1-207ENST00000547338 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
RBFOX1-207ENST00000547338 FAM83GA6ND36 823 aa23.87■■□□□ 1.41
RBFOX1-207ENST00000547338 TRPC5Q9UL62 973 aaPredicted RBP23.87■■□□□ 1.41
RBFOX1-207ENST00000547338 AKAP12Q02952 1782 aa23.87■■□□□ 1.41
RBFOX1-207ENST00000547338 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
RBFOX1-207ENST00000547338 NRAPQ86VF7 1730 aa23.85■■□□□ 1.41
RBFOX1-207ENST00000547338 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
RBFOX1-207ENST00000547338 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
RBFOX1-207ENST00000547338 GLI3P10071 1580 aa23.85■■□□□ 1.41
RBFOX1-207ENST00000547338 UNC5CLQ8IV45 518 aa23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 ATAD2Q6PL18 1390 aa23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 NRKQ7Z2Y5 1582 aa23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 ST20-MTHFSA0A0A6YYL1 179 aa23.84■■□□□ 1.41
RBFOX1-207ENST00000547338 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
RBFOX1-207ENST00000547338 COL14A1Q05707 1796 aaKnown RBP23.83■■□□□ 1.41
RBFOX1-207ENST00000547338 USP19O94966 1318 aa23.83■■□□□ 1.41
RBFOX1-207ENST00000547338 PIK3C2AO00443 1686 aa23.83■■□□□ 1.4
RBFOX1-207ENST00000547338 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
RBFOX1-207ENST00000547338 ANP32CO43423 234 aa23.81■■□□□ 1.4
RBFOX1-207ENST00000547338 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
RBFOX1-207ENST00000547338 USP47Q96K76 1375 aa23.8■■□□□ 1.4
RBFOX1-207ENST00000547338 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
RBFOX1-207ENST00000547338 MON2Q7Z3U7 1717 aa23.79■■□□□ 1.4
RBFOX1-207ENST00000547338 KIAA0232Q92628 1395 aa23.79■■□□□ 1.4
RBFOX1-207ENST00000547338 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-207ENST00000547338 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
RBFOX1-207ENST00000547338 VPS72Q15906 364 aa23.76■■□□□ 1.39
RBFOX1-207ENST00000547338 SLIT3O75094 1523 aa23.76■■□□□ 1.39
RBFOX1-207ENST00000547338 BTG4Q9NY30 223 aa23.75■■□□□ 1.39
RBFOX1-207ENST00000547338 TTC21BQ7Z4L5 1316 aa23.75■■□□□ 1.39
RBFOX1-207ENST00000547338 PUS7Q96PZ0 661 aaKnown RBP23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 LMO7Q8WWI1 1683 aa23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 ZC3H6P61129 1189 aaKnown RBP23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 SLC12A5Q9H2X9 1139 aa23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 PRDM11Q9NQV5 511 aa23.74■■□□□ 1.39
RBFOX1-207ENST00000547338 CPDO75976 1380 aa23.73■■□□□ 1.39
RBFOX1-207ENST00000547338 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
RBFOX1-207ENST00000547338 KTN1Q86UP2 1357 aaKnown RBP23.72■■□□□ 1.39
RBFOX1-207ENST00000547338 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
RBFOX1-207ENST00000547338 UPF1Q92900 1129 aaKnown RBP eCLIP23.71■■□□□ 1.39
RBFOX1-207ENST00000547338 GCP02774 474 aa23.7■■□□□ 1.38
RBFOX1-207ENST00000547338 CAMTA1Q9Y6Y1 1673 aa23.7■■□□□ 1.38
RBFOX1-207ENST00000547338 EP400Q96L91 3159 aa23.7■■□□□ 1.38
RBFOX1-207ENST00000547338 NLRP6P59044 892 aa23.69■■□□□ 1.38
RBFOX1-207ENST00000547338 A0A1W2PP64 1363 aa23.69■■□□□ 1.38
RBFOX1-207ENST00000547338 USP54Q70EL1 1684 aa23.69■■□□□ 1.38
RBFOX1-207ENST00000547338 BRWD3Q6RI45 1802 aa23.69■■□□□ 1.38
RBFOX1-207ENST00000547338 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
RBFOX1-207ENST00000547338 TMC1Q8TDI8 760 aa23.68■■□□□ 1.38
RBFOX1-207ENST00000547338 ONECUT3O60422 494 aaPredicted RBP23.67■■□□□ 1.38
RBFOX1-207ENST00000547338 COL18A1P39060 1754 aa23.66■■□□□ 1.38
RBFOX1-207ENST00000547338 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
RBFOX1-207ENST00000547338 NFAT5O94916 1531 aa23.65■■□□□ 1.38
RBFOX1-207ENST00000547338 SPATA31A5Q5VU36 1347 aa23.65■■□□□ 1.38
RBFOX1-207ENST00000547338 SPATA31A7Q8IWB4 1347 aa23.65■■□□□ 1.38
RBFOX1-207ENST00000547338 WASHC2AQ641Q2 1341 aa23.64■■□□□ 1.38
RBFOX1-207ENST00000547338 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
RBFOX1-207ENST00000547338 USP31Q70CQ4 1352 aa23.64■■□□□ 1.37
RBFOX1-207ENST00000547338 NINLQ9Y2I6 1382 aa23.63■■□□□ 1.37
RBFOX1-207ENST00000547338 NME9Q86XW9 330 aa23.63■■□□□ 1.37
RBFOX1-207ENST00000547338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.63■■□□□ 1.37
RBFOX1-207ENST00000547338 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
RBFOX1-207ENST00000547338 THSD7AQ9UPZ6 1657 aa23.62■■□□□ 1.37
RBFOX1-207ENST00000547338 TMF1P82094 1093 aa23.62■■□□□ 1.37
RBFOX1-207ENST00000547338 SEPT12Q8IYM1 358 aa23.62■■□□□ 1.37
RBFOX1-207ENST00000547338 MYOM1P52179 1685 aa23.62■■□□□ 1.37
RBFOX1-207ENST00000547338 CCDC7Q96M83 1385 aa23.61■■□□□ 1.37
RBFOX1-207ENST00000547338 COL5A2P05997 1499 aaPredicted RBP23.61■■□□□ 1.37
RBFOX1-207ENST00000547338 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
RBFOX1-207ENST00000547338 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
RBFOX1-207ENST00000547338 TERF2IPQ9NYB0 399 aa23.6■■□□□ 1.37
RBFOX1-207ENST00000547338 AATKQ6ZMQ8 1374 aa23.6■■□□□ 1.37
RBFOX1-207ENST00000547338 SPATA31A1Q5TZJ5 1347 aa23.6■■□□□ 1.37
RBFOX1-207ENST00000547338 FAM98CQ17RN3 349 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms