RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 TXLNAP40222 546 aa20.78■□□□□ 0.92
ARHGEF28-214ENST00000545377 MAGEC2Q9UBF1 373 aaPredicted RBP20.78■□□□□ 0.92
ARHGEF28-214ENST00000545377 CDR1P51861 262 aa20.77■□□□□ 0.92
ARHGEF28-214ENST00000545377 AK7Q96M32 723 aa20.77■□□□□ 0.92
ARHGEF28-214ENST00000545377 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.77■□□□□ 0.92
ARHGEF28-214ENST00000545377 MTHFSP49914 203 aa20.77■□□□□ 0.92
ARHGEF28-214ENST00000545377 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZNF644Q9H582 1327 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF28-214ENST00000545377 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
ARHGEF28-214ENST00000545377 PANK1Q8TE04 598 aa20.76■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
ARHGEF28-214ENST00000545377 ANKLE2Q86XL3 938 aa20.75■□□□□ 0.91
ARHGEF28-214ENST00000545377 CEBPZQ03701 1054 aaKnown RBP20.75■□□□□ 0.91
ARHGEF28-214ENST00000545377 AFAP1Q8N556 730 aa20.75■□□□□ 0.91
ARHGEF28-214ENST00000545377 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
ARHGEF28-214ENST00000545377 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
ARHGEF28-214ENST00000545377 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
ARHGEF28-214ENST00000545377 CCDC85AQ96PX6 553 aaPredicted RBP20.74■□□□□ 0.91
ARHGEF28-214ENST00000545377 PRKRIP1Q9H875 184 aaPredicted RBP20.74■□□□□ 0.91
ARHGEF28-214ENST00000545377 CCDC57Q2TAC2 916 aa20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 SLC26A8Q96RN1 970 aa20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 MNS1Q8NEH6 495 aa20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 GNAI3P08754 354 aa20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 NACAP1Q9BZK3 213 aa20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZNF219Q9P2Y4 722 aaPredicted RBP20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 NAT10Q9H0A0 1025 aaKnown RBP20.73■□□□□ 0.91
ARHGEF28-214ENST00000545377 PIBF1Q8WXW3 757 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 HDGFL1Q5TGJ6 251 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 C1orf115Q9H7X2 142 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZNF76P36508 570 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 ARHGAP5Q13017 1502 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 CCDC97Q96F63 343 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF28-214ENST00000545377 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 MAP4K4O95819 1239 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 TMOD2Q9NZR1 351 aa20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 RAI14Q9P0K7 980 aa20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
ARHGEF28-214ENST00000545377 ZNF771Q7L3S4 317 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 WDHD1O75717 1129 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 CDC45O75419 566 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 NEBLO76041 1014 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 SULT6B1Q6IMI4 303 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 STK3Q13188 491 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 TANGO6Q9C0B7 1094 aa20.7■□□□□ 0.9
ARHGEF28-214ENST00000545377 USP5P45974 858 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 SSBP05455 408 aaKnown RBP eCLIP20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 WDR78Q5VTH9 848 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 SMC2O95347 1197 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 NEFHP12036 1026 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
ARHGEF28-214ENST00000545377 SCLT1Q96NL6 688 aa20.68■□□□□ 0.9
ARHGEF28-214ENST00000545377 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
ARHGEF28-214ENST00000545377 WIZO95785 1651 aa20.67■□□□□ 0.9
ARHGEF28-214ENST00000545377 ANKRD62A6NC57 917 aa20.67■□□□□ 0.9
ARHGEF28-214ENST00000545377 TMEM87AQ8NBN3 555 aa20.67■□□□□ 0.9
ARHGEF28-214ENST00000545377 FILIP1LQ4L180 1135 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 NUCB2P80303 420 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 MYO6Q9UM54 1294 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 HIP1O00291 1037 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 SEPT11Q9NVA2 429 aaKnown RBP20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 ZPR1O75312 459 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 TDO2P48775 406 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 TEX35Q5T0J7 233 aa20.66■□□□□ 0.9
ARHGEF28-214ENST00000545377 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 C22orf23Q9BZE7 217 aa20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 GNAI2P04899 355 aa20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 STK38Q15208 465 aa20.65■□□□□ 0.9
ARHGEF28-214ENST00000545377 TRIM22Q8IYM9 498 aa20.64■□□□□ 0.89
ARHGEF28-214ENST00000545377 CHMP5Q9NZZ3 219 aa20.64■□□□□ 0.89
ARHGEF28-214ENST00000545377 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
ARHGEF28-214ENST00000545377 CABP1Q9NZU7 370 aa20.64■□□□□ 0.89
ARHGEF28-214ENST00000545377 KINO60870 393 aaKnown RBP20.63■□□□□ 0.89
ARHGEF28-214ENST00000545377 MYOM3Q5VTT5 1437 aa20.63■□□□□ 0.89
ARHGEF28-214ENST00000545377 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
ARHGEF28-214ENST00000545377 ACBD3Q9H3P7 528 aa20.62■□□□□ 0.89
ARHGEF28-214ENST00000545377 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
ARHGEF28-214ENST00000545377 CRACR2BQ8N4Y2 399 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF28-214ENST00000545377 ABCF2Q9UG63 623 aa20.61■□□□□ 0.89
ARHGEF28-214ENST00000545377 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
ARHGEF28-214ENST00000545377 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
ARHGEF28-214ENST00000545377 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■□□□ 14.2
ARHGEF28-214ENST00000545377 GRM1Q13255 1194 aa20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 HSP90B2PQ58FF3 399 aa20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 ZSCAN25Q6NSZ9 544 aa20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 ANKIB1Q9P2G1 1089 aa20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 ZNF396Q96N95 335 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 PNISRQ8TF01 805 aaKnown RBP20.6■□□□□ 0.89
ARHGEF28-214ENST00000545377 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-214ENST00000545377 RNF214Q8ND24 703 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms