RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
SNHG1-222ENST00000545308 CAPN5O15484 640 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-222ENST00000545308 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-222ENST00000545308 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
SNHG1-222ENST00000545308 ZNF511Q8NB15 262 aa8.13□□□□□ -1.11
SNHG1-222ENST00000545308 TRIM66O15016 1216 aa8.12□□□□□ -1.11
SNHG1-222ENST00000545308 VARSP26640 1264 aaKnown RBP8.12□□□□□ -1.11
SNHG1-222ENST00000545308 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
SNHG1-222ENST00000545308 PCDHB15Q9Y5E8 787 aa8.12□□□□□ -1.11
SNHG1-222ENST00000545308 BMP1P13497 986 aa8.11□□□□□ -1.11
SNHG1-222ENST00000545308 LYPD8Q6UX82 237 aa8.11□□□□□ -1.11
SNHG1-222ENST00000545308 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
SNHG1-222ENST00000545308 MPNDQ8N594 471 aa8.11□□□□□ -1.11
SNHG1-222ENST00000545308 TLL2Q9Y6L7 1015 aa8.11□□□□□ -1.11
SNHG1-222ENST00000545308 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
SNHG1-222ENST00000545308 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
SNHG1-222ENST00000545308 SPTLC1O15269 473 aa8.1□□□□□ -1.11
SNHG1-222ENST00000545308 HRCP23327 699 aa8.09□□□□□ -1.11
SNHG1-222ENST00000545308 CTHP32929 405 aa8.09□□□□□ -1.11
SNHG1-222ENST00000545308 INSM1Q01101 510 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-222ENST00000545308 AK7Q96M32 723 aa8.09□□□□□ -1.11
SNHG1-222ENST00000545308 ZBTB3Q9H5J0 574 aa8.09□□□□□ -1.11
SNHG1-222ENST00000545308 PRPF38BQ5VTL8 546 aaKnown RBP8.08□□□□□ -1.12
SNHG1-222ENST00000545308 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
SNHG1-222ENST00000545308 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-222ENST00000545308 F12P00748 615 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-222ENST00000545308 NNTQ13423 1086 aa8.07□□□□□ -1.12
SNHG1-222ENST00000545308 ARXQ96QS3 562 aa8.07□□□□□ -1.12
SNHG1-222ENST00000545308 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
SNHG1-222ENST00000545308 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
SNHG1-222ENST00000545308 CABLES1Q8TDN4 633 aa8.06□□□□□ -1.12
SNHG1-222ENST00000545308 SLC16A10Q8TF71 515 aa8.06□□□□□ -1.12
SNHG1-222ENST00000545308 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
SNHG1-222ENST00000545308 ZFP42Q96MM3 310 aa8.05□□□□□ -1.12
SNHG1-222ENST00000545308 MAP10Q9P2G4 905 aa8.05□□□□□ -1.12
SNHG1-222ENST00000545308 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
SNHG1-222ENST00000545308 FOXJ1Q92949 421 aa8.04□□□□□ -1.12
SNHG1-222ENST00000545308 CDK15Q96Q40 435 aa8.04□□□□□ -1.12
SNHG1-222ENST00000545308 ADH1CP00326 375 aa8.03□□□□□ -1.12
SNHG1-222ENST00000545308 TIMP2P16035 220 aa8.03□□□□□ -1.12
SNHG1-222ENST00000545308 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
SNHG1-222ENST00000545308 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-222ENST00000545308 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-222ENST00000545308 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
SNHG1-222ENST00000545308 PDE4DQ08499 809 aa8.02□□□□□ -1.13
SNHG1-222ENST00000545308 TUSC1Q2TAM9 212 aa8.02□□□□□ -1.13
SNHG1-222ENST00000545308 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
SNHG1-222ENST00000545308 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
SNHG1-222ENST00000545308 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
SNHG1-222ENST00000545308 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
SNHG1-222ENST00000545308 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
SNHG1-222ENST00000545308 SCARF1Q14162 830 aa8□□□□□ -1.13
SNHG1-222ENST00000545308 ARID5BQ14865 1188 aa8□□□□□ -1.13
SNHG1-222ENST00000545308 QPCTQ16769 361 aa8□□□□□ -1.13
SNHG1-222ENST00000545308 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
SNHG1-222ENST00000545308 IRF7Q92985 503 aa8□□□□□ -1.13
SNHG1-222ENST00000545308 NUTM2BA6NNL0 878 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 NUTM2EB1AL46 878 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 H3BM21 787 aa7.99□□□□□ -1.13
SNHG1-222ENST00000545308 LILRB3O75022 631 aa7.99□□□□□ -1.13
SNHG1-222ENST00000545308 GMPRP36959 345 aa7.99□□□□□ -1.13
SNHG1-222ENST00000545308 VEGFBP49765 207 aa7.99□□□□□ -1.13
SNHG1-222ENST00000545308 NUTM2DQ5VT03 806 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 NUTM2AQ8IVF1 878 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 TSC1Q92574 1164 aa7.99□□□□□ -1.13
SNHG1-222ENST00000545308 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
SNHG1-222ENST00000545308 SUPT5HO00267 1087 aaKnown RBP7.98□□□□□ -1.13
SNHG1-222ENST00000545308 NR5A1Q13285 461 aa7.98□□□□□ -1.13
SNHG1-222ENST00000545308 AGERQ15109 404 aa7.98□□□□□ -1.13
SNHG1-222ENST00000545308 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-222ENST00000545308 NR3C2P08235 984 aa7.97□□□□□ -1.13
SNHG1-222ENST00000545308 GRM5P41594 1212 aa7.97□□□□□ -1.13
SNHG1-222ENST00000545308 ARMC2Q8NEN0 867 aa7.97□□□□□ -1.13
SNHG1-222ENST00000545308 ITPKCQ96DU7 683 aa7.96□□□□□ -1.14
SNHG1-222ENST00000545308 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
SNHG1-222ENST00000545308 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-222ENST00000545308 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
SNHG1-222ENST00000545308 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-222ENST00000545308 C1QTNF2Q9BXJ5 285 aa7.95□□□□□ -1.14
SNHG1-222ENST00000545308 ERBB4Q15303 1308 aa7.95□□□□□ -1.14
SNHG1-222ENST00000545308 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
SNHG1-222ENST00000545308 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-222ENST00000545308 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
SNHG1-222ENST00000545308 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
SNHG1-222ENST00000545308 HOMEZQ8IX15 550 aa7.94□□□□□ -1.14
SNHG1-222ENST00000545308 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
SNHG1-222ENST00000545308 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
SNHG1-222ENST00000545308 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
SNHG1-222ENST00000545308 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
SNHG1-222ENST00000545308 RSPH6AQ9H0K4 717 aa7.93□□□□□ -1.14
SNHG1-222ENST00000545308 TRMT44Q8IYL2 757 aaKnown RBP7.92□□□□□ -1.14
SNHG1-222ENST00000545308 MAP4K5Q9Y4K4 846 aa7.92□□□□□ -1.14
SNHG1-222ENST00000545308 FSHRP23945 695 aa7.91□□□□□ -1.14
SNHG1-222ENST00000545308 C6orf118Q5T5N4 469 aa7.91□□□□□ -1.14
SNHG1-222ENST00000545308 GPKOWQ92917 476 aaPredicted RBP eCLIP7.91□□□□□ -1.147e-32■■■□□ 17.2
SNHG1-222ENST00000545308 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
SNHG1-222ENST00000545308 MAN1A2O60476 641 aa7.9□□□□□ -1.14
SNHG1-222ENST00000545308 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-222ENST00000545308 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms