RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 BLMP54132 1417 aaPredicted RBP18.03■□□□□ 0.48
ACTN1-206ENST00000544964 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
ACTN1-206ENST00000544964 SEPT12Q8IYM1 358 aa18.01■□□□□ 0.47
ACTN1-206ENST00000544964 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
ACTN1-206ENST00000544964 THSD7AQ9UPZ6 1657 aa18.01■□□□□ 0.47
ACTN1-206ENST00000544964 ONECUT3O60422 494 aaPredicted RBP18■□□□□ 0.47
ACTN1-206ENST00000544964 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
ACTN1-206ENST00000544964 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
ACTN1-206ENST00000544964 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
ACTN1-206ENST00000544964 NRKQ7Z2Y5 1582 aa17.99■□□□□ 0.47
ACTN1-206ENST00000544964 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
ACTN1-206ENST00000544964 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
ACTN1-206ENST00000544964 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
ACTN1-206ENST00000544964 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
ACTN1-206ENST00000544964 CCDC9Q9Y3X0 531 aaKnown RBP17.97■□□□□ 0.47
ACTN1-206ENST00000544964 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
ACTN1-206ENST00000544964 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
ACTN1-206ENST00000544964 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
ACTN1-206ENST00000544964 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
ACTN1-206ENST00000544964 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
ACTN1-206ENST00000544964 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
ACTN1-206ENST00000544964 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
ACTN1-206ENST00000544964 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
ACTN1-206ENST00000544964 RGPD1P0DJD0 1748 aa17.93■□□□□ 0.46
ACTN1-206ENST00000544964 TNS1Q9HBL0 1735 aaKnown RBP17.93■□□□□ 0.46
ACTN1-206ENST00000544964 FAM98CQ17RN3 349 aaKnown RBP17.93■□□□□ 0.46
ACTN1-206ENST00000544964 KRT27Q7Z3Y8 459 aa17.93■□□□□ 0.46
ACTN1-206ENST00000544964 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
ACTN1-206ENST00000544964 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
ACTN1-206ENST00000544964 ACEP12821 1306 aa17.92■□□□□ 0.46
ACTN1-206ENST00000544964 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
ACTN1-206ENST00000544964 CCDC61Q9Y6R9 512 aa17.91■□□□□ 0.46
ACTN1-206ENST00000544964 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
ACTN1-206ENST00000544964 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
ACTN1-206ENST00000544964 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
ACTN1-206ENST00000544964 USP19O94966 1318 aa17.89■□□□□ 0.45
ACTN1-206ENST00000544964 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
ACTN1-206ENST00000544964 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-206ENST00000544964 A0A0G2JS52 829 aa17.88■□□□□ 0.45
ACTN1-206ENST00000544964 MYT1Q01538 1121 aa17.88■□□□□ 0.45
ACTN1-206ENST00000544964 CHRNA2Q15822 529 aa17.88■□□□□ 0.45
ACTN1-206ENST00000544964 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
ACTN1-206ENST00000544964 CAMTA1Q9Y6Y1 1673 aa17.87■□□□□ 0.45
ACTN1-206ENST00000544964 SPATA31A1Q5TZJ5 1347 aa17.87■□□□□ 0.45
ACTN1-206ENST00000544964 SSH2Q76I76 1423 aa17.87■□□□□ 0.45
ACTN1-206ENST00000544964 LRP5O75197 1615 aa17.86■□□□□ 0.45
ACTN1-206ENST00000544964 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
ACTN1-206ENST00000544964 DISP2A7MBM2 1401 aa17.85■□□□□ 0.45
ACTN1-206ENST00000544964 CPDO75976 1380 aa17.85■□□□□ 0.45
ACTN1-206ENST00000544964 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
ACTN1-206ENST00000544964 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
ACTN1-206ENST00000544964 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
ACTN1-206ENST00000544964 SLIT3O75094 1523 aa17.84■□□□□ 0.45
ACTN1-206ENST00000544964 USP6P35125 1406 aa17.84■□□□□ 0.45
ACTN1-206ENST00000544964 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
ACTN1-206ENST00000544964 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
ACTN1-206ENST00000544964 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
ACTN1-206ENST00000544964 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
ACTN1-206ENST00000544964 AKAP12Q02952 1782 aa17.83■□□□□ 0.44
ACTN1-206ENST00000544964 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
ACTN1-206ENST00000544964 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-206ENST00000544964 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
ACTN1-206ENST00000544964 STRN4Q9NRL3 753 aa17.81■□□□□ 0.44
ACTN1-206ENST00000544964 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-206ENST00000544964 COL18A1P39060 1754 aa17.8■□□□□ 0.44
ACTN1-206ENST00000544964 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
ACTN1-206ENST00000544964 BAG6P46379 1132 aa17.79■□□□□ 0.44
ACTN1-206ENST00000544964 RREB1Q92766 1687 aa17.78■□□□□ 0.44
ACTN1-206ENST00000544964 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
ACTN1-206ENST00000544964 LRRC37A3O60309 1634 aa17.77■□□□□ 0.44
ACTN1-206ENST00000544964 GCP02774 474 aa17.77■□□□□ 0.44
ACTN1-206ENST00000544964 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
ACTN1-206ENST00000544964 BARGINQ6ZT62 677 aa17.77■□□□□ 0.44
ACTN1-206ENST00000544964 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
ACTN1-206ENST00000544964 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.44
ACTN1-206ENST00000544964 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
ACTN1-206ENST00000544964 EN1Q05925 392 aaPredicted RBP17.76■□□□□ 0.43
ACTN1-206ENST00000544964 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
ACTN1-206ENST00000544964 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
ACTN1-206ENST00000544964 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
ACTN1-206ENST00000544964 EVC2Q86UK5 1308 aa17.74■□□□□ 0.43
ACTN1-206ENST00000544964 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
ACTN1-206ENST00000544964 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
ACTN1-206ENST00000544964 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
ACTN1-206ENST00000544964 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
ACTN1-206ENST00000544964 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
ACTN1-206ENST00000544964 CRB1P82279 1406 aa17.72■□□□□ 0.43
ACTN1-206ENST00000544964 NFAT5O94916 1531 aa17.72■□□□□ 0.43
ACTN1-206ENST00000544964 EVA1CP58658 441 aa17.72■□□□□ 0.43
ACTN1-206ENST00000544964 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
ACTN1-206ENST00000544964 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
ACTN1-206ENST00000544964 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
ACTN1-206ENST00000544964 SBF2Q86WG5 1849 aa17.71■□□□□ 0.43
ACTN1-206ENST00000544964 TRIM37O94972 964 aa17.71■□□□□ 0.43
ACTN1-206ENST00000544964 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
ACTN1-206ENST00000544964 NLRP6P59044 892 aa17.7■□□□□ 0.42
ACTN1-206ENST00000544964 THRAP3Q9Y2W1 955 aaKnown RBP17.7■□□□□ 0.42
ACTN1-206ENST00000544964 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
ACTN1-206ENST00000544964 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
ACTN1-206ENST00000544964 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms