RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
CHEK1-218ENST00000544373 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
CHEK1-218ENST00000544373 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
CHEK1-218ENST00000544373 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
CHEK1-218ENST00000544373 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
CHEK1-218ENST00000544373 RALGAPBQ86X10 1494 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 EP400Q96L91 3159 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 VPS72Q15906 364 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 BTG4Q9NY30 223 aa15.32■□□□□ 0.04
CHEK1-218ENST00000544373 ABCA3Q99758 1704 aa15.3■□□□□ 0.04
CHEK1-218ENST00000544373 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
CHEK1-218ENST00000544373 GLI3P10071 1580 aa15.3■□□□□ 0.04
CHEK1-218ENST00000544373 TOPAZ1Q8N9V7 1692 aa15.3■□□□□ 0.04
CHEK1-218ENST00000544373 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
CHEK1-218ENST00000544373 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
CHEK1-218ENST00000544373 ZC3H6P61129 1189 aaKnown RBP15.28■□□□□ 0.04
CHEK1-218ENST00000544373 ABTB2Q8N961 1025 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 ATAD2Q6PL18 1390 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 PRDM11Q9NQV5 511 aa15.28■□□□□ 0.04
CHEK1-218ENST00000544373 KIAA0232Q92628 1395 aa15.27■□□□□ 0.04
CHEK1-218ENST00000544373 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.27■□□□□ 0.03
CHEK1-218ENST00000544373 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
CHEK1-218ENST00000544373 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
CHEK1-218ENST00000544373 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
CHEK1-218ENST00000544373 FAM98CQ17RN3 349 aaKnown RBP15.24■□□□□ 0.03
CHEK1-218ENST00000544373 USP6P35125 1406 aa15.24■□□□□ 0.03
CHEK1-218ENST00000544373 USP19O94966 1318 aa15.24■□□□□ 0.03
CHEK1-218ENST00000544373 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
CHEK1-218ENST00000544373 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
CHEK1-218ENST00000544373 GCP02774 474 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 SSH2Q76I76 1423 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
CHEK1-218ENST00000544373 NLRP13Q86W25 1043 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
CHEK1-218ENST00000544373 NLRP6P59044 892 aa15.21■□□□□ 0.03
CHEK1-218ENST00000544373 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
CHEK1-218ENST00000544373 A0A0G2JS52 829 aa15.2■□□□□ 0.02
CHEK1-218ENST00000544373 MYT1Q01538 1121 aa15.2■□□□□ 0.02
CHEK1-218ENST00000544373 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
CHEK1-218ENST00000544373 KRT27Q7Z3Y8 459 aa15.19■□□□□ 0.02
CHEK1-218ENST00000544373 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
CHEK1-218ENST00000544373 SBNO2Q9Y2G9 1366 aa15.19■□□□□ 0.02
CHEK1-218ENST00000544373 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 CPDO75976 1380 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
CHEK1-218ENST00000544373 PCGF6Q9BYE7 350 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
CHEK1-218ENST00000544373 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
CHEK1-218ENST00000544373 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 LARP1Q6PKG0 1096 aaKnown RBP15.17■□□□□ 0.02
CHEK1-218ENST00000544373 TESK2Q96S53 571 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
CHEK1-218ENST00000544373 EVA1CP58658 441 aa15.16■□□□□ 0.02
CHEK1-218ENST00000544373 CCDC125Q86Z20 511 aa15.16■□□□□ 0.02
CHEK1-218ENST00000544373 TMC1Q8TDI8 760 aa15.16■□□□□ 0.02
CHEK1-218ENST00000544373 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
CHEK1-218ENST00000544373 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
CHEK1-218ENST00000544373 KTN1Q86UP2 1357 aaKnown RBP15.15■□□□□ 0.02
CHEK1-218ENST00000544373 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
CHEK1-218ENST00000544373 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
CHEK1-218ENST00000544373 SOX12O15370 315 aa15.14■□□□□ 0.01
CHEK1-218ENST00000544373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■■■ 28.9
CHEK1-218ENST00000544373 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
CHEK1-218ENST00000544373 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
CHEK1-218ENST00000544373 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
CHEK1-218ENST00000544373 PIK3C2AO00443 1686 aa15.13■□□□□ 0.01
CHEK1-218ENST00000544373 SLIT3O75094 1523 aa15.12■□□□□ 0.01
CHEK1-218ENST00000544373 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
CHEK1-218ENST00000544373 NME9Q86XW9 330 aa15.12■□□□□ 0.01
CHEK1-218ENST00000544373 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
CHEK1-218ENST00000544373 LMO7Q8WWI1 1683 aa15.11■□□□□ 0.01
CHEK1-218ENST00000544373 ARHGEF25Q86VW2 580 aa15.11■□□□□ 0.01
CHEK1-218ENST00000544373 BARGINQ6ZT62 677 aa15.1■□□□□ 0.01
CHEK1-218ENST00000544373 TCP11L2Q8N4U5 519 aa15.1■□□□□ 0.01
CHEK1-218ENST00000544373 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
CHEK1-218ENST00000544373 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
CHEK1-218ENST00000544373 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
CHEK1-218ENST00000544373 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
CHEK1-218ENST00000544373 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
CHEK1-218ENST00000544373 A0A1W2PP64 1363 aa15.08■□□□□ 0.01
CHEK1-218ENST00000544373 USP47Q96K76 1375 aa15.08■□□□□ 0.01
CHEK1-218ENST00000544373 AKAP12Q02952 1782 aa15.08■□□□□ 0
CHEK1-218ENST00000544373 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0
CHEK1-218ENST00000544373 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
CHEK1-218ENST00000544373 USP31Q70CQ4 1352 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms