RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
C1RL-209ENST00000543941 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
C1RL-209ENST00000543941 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
C1RL-209ENST00000543941 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
C1RL-209ENST00000543941 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
C1RL-209ENST00000543941 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.23
C1RL-209ENST00000543941 ACEP12821 1306 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 PLEKHG3A1L390 1219 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
C1RL-209ENST00000543941 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
C1RL-209ENST00000543941 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
C1RL-209ENST00000543941 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
C1RL-209ENST00000543941 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
C1RL-209ENST00000543941 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
C1RL-209ENST00000543941 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
C1RL-209ENST00000543941 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
C1RL-209ENST00000543941 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
C1RL-209ENST00000543941 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
C1RL-209ENST00000543941 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
C1RL-209ENST00000543941 DEFB132Q7Z7B7 95 aa16.46■□□□□ 0.23
C1RL-209ENST00000543941 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
C1RL-209ENST00000543941 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
C1RL-209ENST00000543941 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
C1RL-209ENST00000543941 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
C1RL-209ENST00000543941 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
C1RL-209ENST00000543941 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
C1RL-209ENST00000543941 THSD7AQ9UPZ6 1657 aa16.44■□□□□ 0.22
C1RL-209ENST00000543941 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
C1RL-209ENST00000543941 SRPK2P78362 688 aaKnown RBP16.43■□□□□ 0.22
C1RL-209ENST00000543941 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
C1RL-209ENST00000543941 PRDM11Q9NQV5 511 aa16.43■□□□□ 0.22
C1RL-209ENST00000543941 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
C1RL-209ENST00000543941 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
C1RL-209ENST00000543941 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
C1RL-209ENST00000543941 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
C1RL-209ENST00000543941 LMO7Q8WWI1 1683 aa16.42■□□□□ 0.22
C1RL-209ENST00000543941 USP19O94966 1318 aa16.42■□□□□ 0.22
C1RL-209ENST00000543941 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
C1RL-209ENST00000543941 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
C1RL-209ENST00000543941 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
C1RL-209ENST00000543941 USP6P35125 1406 aa16.38■□□□□ 0.21
C1RL-209ENST00000543941 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
C1RL-209ENST00000543941 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
C1RL-209ENST00000543941 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
C1RL-209ENST00000543941 COL18A1P39060 1754 aa16.36■□□□□ 0.21
C1RL-209ENST00000543941 AKAP12Q02952 1782 aa16.36■□□□□ 0.21
C1RL-209ENST00000543941 GCP02774 474 aa16.36■□□□□ 0.21
C1RL-209ENST00000543941 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
C1RL-209ENST00000543941 CPDO75976 1380 aa16.36■□□□□ 0.21
C1RL-209ENST00000543941 A0A0G2JS52 829 aa16.35■□□□□ 0.21
C1RL-209ENST00000543941 MYT1Q01538 1121 aa16.35■□□□□ 0.21
C1RL-209ENST00000543941 TNS1Q9HBL0 1735 aaKnown RBP16.35■□□□□ 0.21
C1RL-209ENST00000543941 SLIT3O75094 1523 aa16.35■□□□□ 0.21
C1RL-209ENST00000543941 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
C1RL-209ENST00000543941 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
C1RL-209ENST00000543941 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
C1RL-209ENST00000543941 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
C1RL-209ENST00000543941 RGPD5Q99666 1765 aa16.33■□□□□ 0.2
C1RL-209ENST00000543941 CPSF1Q10570 1443 aaKnown RBP16.32■□□□□ 0.2
C1RL-209ENST00000543941 COL5A2P05997 1499 aaPredicted RBP16.31■□□□□ 0.2
C1RL-209ENST00000543941 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
C1RL-209ENST00000543941 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
C1RL-209ENST00000543941 NLRP6P59044 892 aa16.31■□□□□ 0.2
C1RL-209ENST00000543941 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
C1RL-209ENST00000543941 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
C1RL-209ENST00000543941 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
C1RL-209ENST00000543941 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
C1RL-209ENST00000543941 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
C1RL-209ENST00000543941 EVA1CP58658 441 aa16.29■□□□□ 0.2
C1RL-209ENST00000543941 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
C1RL-209ENST00000543941 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.2
C1RL-209ENST00000543941 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
C1RL-209ENST00000543941 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
C1RL-209ENST00000543941 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
C1RL-209ENST00000543941 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
C1RL-209ENST00000543941 PARP4Q9UKK3 1724 aaKnown RBP16.26■□□□□ 0.19
C1RL-209ENST00000543941 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
C1RL-209ENST00000543941 TRIM37O94972 964 aa16.26■□□□□ 0.19
C1RL-209ENST00000543941 EZH2Q15910 746 aaKnown RBP16.26■□□□□ 0.19
C1RL-209ENST00000543941 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
C1RL-209ENST00000543941 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
C1RL-209ENST00000543941 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 NFAT5O94916 1531 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 BAG6P46379 1132 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 CAMKK2Q96RR4 588 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
C1RL-209ENST00000543941 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
C1RL-209ENST00000543941 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
C1RL-209ENST00000543941 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
C1RL-209ENST00000543941 CRB1P82279 1406 aa16.23■□□□□ 0.19
C1RL-209ENST00000543941 SOX12O15370 315 aa16.23■□□□□ 0.19
C1RL-209ENST00000543941 TESK2Q96S53 571 aa16.23■□□□□ 0.19
C1RL-209ENST00000543941 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
C1RL-209ENST00000543941 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
C1RL-209ENST00000543941 LRRC37A3O60309 1634 aa16.23■□□□□ 0.19
C1RL-209ENST00000543941 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms