RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
KLHL42-204ENST00000543254 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
KLHL42-204ENST00000543254 TOPAZ1Q8N9V7 1692 aa17.49■□□□□ 0.39
KLHL42-204ENST00000543254 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
KLHL42-204ENST00000543254 KTN1Q86UP2 1357 aaKnown RBP17.49■□□□□ 0.39
KLHL42-204ENST00000543254 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
KLHL42-204ENST00000543254 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
KLHL42-204ENST00000543254 USP6P35125 1406 aa17.47■□□□□ 0.39
KLHL42-204ENST00000543254 LRP6O75581 1613 aa17.47■□□□□ 0.39
KLHL42-204ENST00000543254 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
KLHL42-204ENST00000543254 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
KLHL42-204ENST00000543254 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
KLHL42-204ENST00000543254 NLRP6P59044 892 aa17.44■□□□□ 0.38
KLHL42-204ENST00000543254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
KLHL42-204ENST00000543254 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
KLHL42-204ENST00000543254 TTC21AQ8NDW8 1320 aa17.44■□□□□ 0.38
KLHL42-204ENST00000543254 ZEB1P37275 1124 aaPredicted RBP17.43■□□□□ 0.38
KLHL42-204ENST00000543254 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
KLHL42-204ENST00000543254 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
KLHL42-204ENST00000543254 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
KLHL42-204ENST00000543254 AFF2P51816 1311 aa17.42■□□□□ 0.38
KLHL42-204ENST00000543254 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
KLHL42-204ENST00000543254 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
KLHL42-204ENST00000543254 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
KLHL42-204ENST00000543254 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.38
KLHL42-204ENST00000543254 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
KLHL42-204ENST00000543254 USP21Q9UK80 565 aa17.38■□□□□ 0.37
KLHL42-204ENST00000543254 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
KLHL42-204ENST00000543254 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
KLHL42-204ENST00000543254 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
KLHL42-204ENST00000543254 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
KLHL42-204ENST00000543254 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
KLHL42-204ENST00000543254 NME9Q86XW9 330 aa17.37■□□□□ 0.37
KLHL42-204ENST00000543254 SOX12O15370 315 aa17.36■□□□□ 0.37
KLHL42-204ENST00000543254 GCP02774 474 aa17.36■□□□□ 0.37
KLHL42-204ENST00000543254 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
KLHL42-204ENST00000543254 USP19O94966 1318 aa17.36■□□□□ 0.37
KLHL42-204ENST00000543254 FNBP4Q8N3X1 1017 aaPredicted RBP17.35■□□□□ 0.37
KLHL42-204ENST00000543254 KCNH5Q8NCM2 988 aa17.35■□□□□ 0.37
KLHL42-204ENST00000543254 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
KLHL42-204ENST00000543254 KIAA0232Q92628 1395 aa17.33■□□□□ 0.36
KLHL42-204ENST00000543254 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
KLHL42-204ENST00000543254 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
KLHL42-204ENST00000543254 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
KLHL42-204ENST00000543254 COG3Q96JB2 828 aa17.33■□□□□ 0.36
KLHL42-204ENST00000543254 QTRT2Q9H974 415 aaKnown RBP17.33■□□□□ 0.36
KLHL42-204ENST00000543254 TRPC5Q9UL62 973 aaPredicted RBP17.33■□□□□ 0.36
KLHL42-204ENST00000543254 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
KLHL42-204ENST00000543254 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
KLHL42-204ENST00000543254 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
KLHL42-204ENST00000543254 CCDC9Q9Y3X0 531 aaKnown RBP17.32■□□□□ 0.36
KLHL42-204ENST00000543254 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
KLHL42-204ENST00000543254 RXRBP28702 533 aa17.31■□□□□ 0.36
KLHL42-204ENST00000543254 PANK3Q9H999 370 aa17.31■□□□□ 0.36
KLHL42-204ENST00000543254 BTG4Q9NY30 223 aa17.31■□□□□ 0.36
KLHL42-204ENST00000543254 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
KLHL42-204ENST00000543254 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
KLHL42-204ENST00000543254 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
KLHL42-204ENST00000543254 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
KLHL42-204ENST00000543254 EVA1CP58658 441 aa17.29■□□□□ 0.36
KLHL42-204ENST00000543254 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
KLHL42-204ENST00000543254 CPDO75976 1380 aa17.28■□□□□ 0.36
KLHL42-204ENST00000543254 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
KLHL42-204ENST00000543254 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
KLHL42-204ENST00000543254 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
KLHL42-204ENST00000543254 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
KLHL42-204ENST00000543254 FYB1O15117 783 aa17.27■□□□□ 0.36
KLHL42-204ENST00000543254 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
KLHL42-204ENST00000543254 ABCA3Q99758 1704 aa17.27■□□□□ 0.35
KLHL42-204ENST00000543254 CCDC7Q96M83 1385 aa17.27■□□□□ 0.35
KLHL42-204ENST00000543254 SLIT2O94813 1529 aa17.26■□□□□ 0.35
KLHL42-204ENST00000543254 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
KLHL42-204ENST00000543254 ILDR2Q71H61 639 aa17.26■□□□□ 0.35
KLHL42-204ENST00000543254 KNSTRNQ9Y448 316 aa17.26■□□□□ 0.35
KLHL42-204ENST00000543254 SLIT3O75094 1523 aa17.26■□□□□ 0.35
KLHL42-204ENST00000543254 VPS72Q15906 364 aa17.25■□□□□ 0.35
KLHL42-204ENST00000543254 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
KLHL42-204ENST00000543254 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 OVOS2A0A0J9YW53 1432 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 ATRNO75882 1429 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 OVOS2Q6IE36 1432 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
KLHL42-204ENST00000543254 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
KLHL42-204ENST00000543254 MYOM1P52179 1685 aa17.23■□□□□ 0.35
KLHL42-204ENST00000543254 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
KLHL42-204ENST00000543254 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
KLHL42-204ENST00000543254 A0A0G2JS52 829 aa17.22■□□□□ 0.35
KLHL42-204ENST00000543254 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
KLHL42-204ENST00000543254 MYT1Q01538 1121 aa17.22■□□□□ 0.35
KLHL42-204ENST00000543254 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
KLHL42-204ENST00000543254 AMPHP49418 695 aa17.21■□□□□ 0.35
KLHL42-204ENST00000543254 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
KLHL42-204ENST00000543254 PLCH1Q4KWH8 1693 aa17.19■□□□□ 0.34
KLHL42-204ENST00000543254 NSD2O96028 1365 aa17.18■□□□□ 0.34
KLHL42-204ENST00000543254 NFAT5O94916 1531 aa17.18■□□□□ 0.34
KLHL42-204ENST00000543254 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
KLHL42-204ENST00000543254 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
KLHL42-204ENST00000543254 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
KLHL42-204ENST00000543254 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms