RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FAM83GA6ND36 823 aa23.48■■□□□ 1.35
CCND1-205ENST00000542367 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
CCND1-205ENST00000542367 QRICH2Q9H0J4 1663 aa23.48■■□□□ 1.35
CCND1-205ENST00000542367 TOPAZ1Q8N9V7 1692 aa23.46■■□□□ 1.35
CCND1-205ENST00000542367 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.46■■□□□ 1.35
CCND1-205ENST00000542367 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
CCND1-205ENST00000542367 PPIP5K1Q6PFW1 1433 aa23.43■■□□□ 1.34
CCND1-205ENST00000542367 EVC2Q86UK5 1308 aa23.42■■□□□ 1.34
CCND1-205ENST00000542367 VPS72Q15906 364 aa23.42■■□□□ 1.34
CCND1-205ENST00000542367 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
CCND1-205ENST00000542367 RALGAPBQ86X10 1494 aa23.42■■□□□ 1.34
CCND1-205ENST00000542367 PLCH1Q4KWH8 1693 aa23.41■■□□□ 1.34
CCND1-205ENST00000542367 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
CCND1-205ENST00000542367 NWD2Q9ULI1 1742 aa23.4■■□□□ 1.34
CCND1-205ENST00000542367 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
CCND1-205ENST00000542367 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
CCND1-205ENST00000542367 ABTB2Q8N961 1025 aa23.39■■□□□ 1.33
CCND1-205ENST00000542367 CARD11Q9BXL7 1154 aa23.39■■□□□ 1.33
CCND1-205ENST00000542367 GLI3P10071 1580 aa23.39■■□□□ 1.33
CCND1-205ENST00000542367 CRYBG1Q9Y4K1 1723 aa23.38■■□□□ 1.33
CCND1-205ENST00000542367 ATAD2Q6PL18 1390 aa23.38■■□□□ 1.33
CCND1-205ENST00000542367 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
CCND1-205ENST00000542367 COL14A1Q05707 1796 aaKnown RBP23.35■■□□□ 1.33
CCND1-205ENST00000542367 ZC3H6P61129 1189 aaKnown RBP23.34■■□□□ 1.33
CCND1-205ENST00000542367 KIAA0232Q92628 1395 aa23.33■■□□□ 1.33
CCND1-205ENST00000542367 SEPT12Q8IYM1 358 aa23.33■■□□□ 1.33
CCND1-205ENST00000542367 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
CCND1-205ENST00000542367 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
CCND1-205ENST00000542367 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
CCND1-205ENST00000542367 NRAPQ86VF7 1730 aa23.32■■□□□ 1.32
CCND1-205ENST00000542367 PHRF1Q9P1Y6 1649 aaKnown RBP23.32■■□□□ 1.32
CCND1-205ENST00000542367 BRD4O60885 1362 aaPredicted RBP23.31■■□□□ 1.32
CCND1-205ENST00000542367 USP6P35125 1406 aa23.3■■□□□ 1.32
CCND1-205ENST00000542367 USP19O94966 1318 aa23.29■■□□□ 1.32
CCND1-205ENST00000542367 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
CCND1-205ENST00000542367 EP400Q96L91 3159 aa23.28■■□□□ 1.32
CCND1-205ENST00000542367 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
CCND1-205ENST00000542367 BRWD3Q6RI45 1802 aa23.27■■□□□ 1.32
CCND1-205ENST00000542367 GCP02774 474 aa23.27■■□□□ 1.32
CCND1-205ENST00000542367 FAM98CQ17RN3 349 aaKnown RBP23.27■■□□□ 1.32
CCND1-205ENST00000542367 A0A0G2JS52 829 aa23.26■■□□□ 1.31
CCND1-205ENST00000542367 NLRP6P59044 892 aa23.26■■□□□ 1.31
CCND1-205ENST00000542367 MYT1Q01538 1121 aa23.26■■□□□ 1.31
CCND1-205ENST00000542367 SPATA31A5Q5VU36 1347 aa23.26■■□□□ 1.31
CCND1-205ENST00000542367 SPATA31A7Q8IWB4 1347 aa23.26■■□□□ 1.31
CCND1-205ENST00000542367 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
CCND1-205ENST00000542367 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
CCND1-205ENST00000542367 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
CCND1-205ENST00000542367 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
CCND1-205ENST00000542367 EVA1CP58658 441 aa23.23■■□□□ 1.31
CCND1-205ENST00000542367 KRT27Q7Z3Y8 459 aa23.23■■□□□ 1.31
CCND1-205ENST00000542367 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
CCND1-205ENST00000542367 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
CCND1-205ENST00000542367 CPDO75976 1380 aa23.23■■□□□ 1.31
CCND1-205ENST00000542367 AKAP12Q02952 1782 aa23.2■■□□□ 1.3
CCND1-205ENST00000542367 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.3
CCND1-205ENST00000542367 SPATA31A1Q5TZJ5 1347 aa23.2■■□□□ 1.3
CCND1-205ENST00000542367 KTN1Q86UP2 1357 aaKnown RBP23.19■■□□□ 1.3
CCND1-205ENST00000542367 ST20-MTHFSA0A0A6YYL1 179 aa23.19■■□□□ 1.3
CCND1-205ENST00000542367 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
CCND1-205ENST00000542367 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
CCND1-205ENST00000542367 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
CCND1-205ENST00000542367 ZBTB7CA1YPR0 619 aa23.18■■□□□ 1.3
CCND1-205ENST00000542367 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
CCND1-205ENST00000542367 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
CCND1-205ENST00000542367 USP35Q9P2H5 1018 aa23.17■■□□□ 1.3
CCND1-205ENST00000542367 LARP1Q6PKG0 1096 aaKnown RBP23.16■■□□□ 1.3
CCND1-205ENST00000542367 TESK2Q96S53 571 aa23.16■■□□□ 1.3
CCND1-205ENST00000542367 SLIT3O75094 1523 aa23.16■■□□□ 1.3
CCND1-205ENST00000542367 BLMP54132 1417 aaPredicted RBP23.16■■□□□ 1.3
CCND1-205ENST00000542367 PUS7Q96PZ0 661 aaKnown RBP23.15■■□□□ 1.3
CCND1-205ENST00000542367 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
CCND1-205ENST00000542367 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
CCND1-205ENST00000542367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCND1-205ENST00000542367 CLSPNQ9HAW4 1339 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 SOX12O15370 315 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
CCND1-205ENST00000542367 FAM182BQ5T319 152 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 TIMELESSQ9UNS1 1208 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 AATKQ6ZMQ8 1374 aa23.12■■□□□ 1.29
CCND1-205ENST00000542367 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
CCND1-205ENST00000542367 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
CCND1-205ENST00000542367 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
CCND1-205ENST00000542367 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
CCND1-205ENST00000542367 TERF2IPQ9NYB0 399 aa23.1■■□□□ 1.29
CCND1-205ENST00000542367 ZRANB1Q9UGI0 708 aa23.1■■□□□ 1.29
CCND1-205ENST00000542367 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
CCND1-205ENST00000542367 DEFB132Q7Z7B7 95 aa23.09■■□□□ 1.29
CCND1-205ENST00000542367 ARHGEF25Q86VW2 580 aa23.09■■□□□ 1.29
CCND1-205ENST00000542367 NME9Q86XW9 330 aa23.08■■□□□ 1.29
CCND1-205ENST00000542367 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
CCND1-205ENST00000542367 USP47Q96K76 1375 aa23.07■■□□□ 1.28
CCND1-205ENST00000542367 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
CCND1-205ENST00000542367 A0A1W2PP64 1363 aa23.06■■□□□ 1.28
CCND1-205ENST00000542367 COL18A1P39060 1754 aa23.06■■□□□ 1.28
CCND1-205ENST00000542367 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
CCND1-205ENST00000542367 TMF1P82094 1093 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms