RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ROCK2O75116 1388 aaKnown RBP28.93■■■□□ 2.22
DDB1-220ENST00000542337 TRIM26Q12899 539 aaPredicted RBP28.93■■■□□ 2.22
DDB1-220ENST00000542337 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.93■■■□□ 2.22
DDB1-220ENST00000542337 CABP2Q9NPB3 220 aa28.92■■■□□ 2.22
DDB1-220ENST00000542337 BTG4Q9NY30 223 aa28.92■■■□□ 2.22
DDB1-220ENST00000542337 PRDM11Q9NQV5 511 aa28.9■■■□□ 2.22
DDB1-220ENST00000542337 ALS2Q96Q42 1657 aa28.89■■■□□ 2.22
DDB1-220ENST00000542337 EVC2Q86UK5 1308 aa28.89■■■□□ 2.21
DDB1-220ENST00000542337 ABTB2Q8N961 1025 aa28.88■■■□□ 2.21
DDB1-220ENST00000542337 PPIP5K1Q6PFW1 1433 aa28.87■■■□□ 2.21
DDB1-220ENST00000542337 ABCA3Q99758 1704 aa28.87■■■□□ 2.21
DDB1-220ENST00000542337 NUTM2GQ5VZR2 741 aa28.87■■■□□ 2.21
DDB1-220ENST00000542337 CCDC125Q86Z20 511 aa28.87■■■□□ 2.21
DDB1-220ENST00000542337 SEPT12Q8IYM1 358 aa28.87■■■□□ 2.21
DDB1-220ENST00000542337 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
DDB1-220ENST00000542337 GLI3P10071 1580 aa28.84■■■□□ 2.21
DDB1-220ENST00000542337 A0A0G2JS52 829 aa28.84■■■□□ 2.21
DDB1-220ENST00000542337 MYT1Q01538 1121 aa28.84■■■□□ 2.21
DDB1-220ENST00000542337 CABP1Q9NZU7 370 aa28.84■■■□□ 2.21
DDB1-220ENST00000542337 PLCH1Q4KWH8 1693 aa28.83■■■□□ 2.21
DDB1-220ENST00000542337 ONECUT3O60422 494 aaPredicted RBP28.83■■■□□ 2.21
DDB1-220ENST00000542337 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
DDB1-220ENST00000542337 TRPM1Q7Z4N2 1603 aa28.82■■■□□ 2.2
DDB1-220ENST00000542337 TOPAZ1Q8N9V7 1692 aa28.81■■■□□ 2.2
DDB1-220ENST00000542337 BRD4O60885 1362 aaPredicted RBP28.81■■■□□ 2.2
DDB1-220ENST00000542337 NLRP13Q86W25 1043 aa28.81■■■□□ 2.2
DDB1-220ENST00000542337 COL14A1Q05707 1796 aaKnown RBP28.8■■■□□ 2.2
DDB1-220ENST00000542337 QRICH2Q9H0J4 1663 aa28.8■■■□□ 2.2
DDB1-220ENST00000542337 KIAA0232Q92628 1395 aa28.8■■■□□ 2.2
DDB1-220ENST00000542337 ZC3H6P61129 1189 aaKnown RBP28.8■■■□□ 2.2
DDB1-220ENST00000542337 FAM98CQ17RN3 349 aaKnown RBP28.78■■■□□ 2.2
DDB1-220ENST00000542337 CARD11Q9BXL7 1154 aa28.78■■■□□ 2.2
DDB1-220ENST00000542337 CHRNA2Q15822 529 aa28.77■■■□□ 2.2
DDB1-220ENST00000542337 KRT27Q7Z3Y8 459 aa28.77■■■□□ 2.2
DDB1-220ENST00000542337 EVA1CP58658 441 aa28.76■■■□□ 2.19
DDB1-220ENST00000542337 SF3B2Q13435 895 aaKnown RBP28.75■■■□□ 2.19
DDB1-220ENST00000542337 SPATA31A5Q5VU36 1347 aa28.74■■■□□ 2.19
DDB1-220ENST00000542337 SPATA31A7Q8IWB4 1347 aa28.74■■■□□ 2.19
DDB1-220ENST00000542337 ZNF692Q9BU19 519 aaPredicted RBP28.74■■■□□ 2.19
DDB1-220ENST00000542337 STRN4Q9NRL3 753 aa28.73■■■□□ 2.19
DDB1-220ENST00000542337 GCP02774 474 aa28.71■■■□□ 2.19
DDB1-220ENST00000542337 NLRP6P59044 892 aa28.71■■■□□ 2.19
DDB1-220ENST00000542337 USP19O94966 1318 aa28.7■■■□□ 2.19
DDB1-220ENST00000542337 USP6P35125 1406 aa28.7■■■□□ 2.19
DDB1-220ENST00000542337 NRAPQ86VF7 1730 aa28.7■■■□□ 2.19
DDB1-220ENST00000542337 CRYBG1Q9Y4K1 1723 aa28.7■■■□□ 2.19
DDB1-220ENST00000542337 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
DDB1-220ENST00000542337 CPDO75976 1380 aa28.68■■■□□ 2.18
DDB1-220ENST00000542337 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
DDB1-220ENST00000542337 SPATA31A1Q5TZJ5 1347 aa28.67■■■□□ 2.18
DDB1-220ENST00000542337 EP400Q96L91 3159 aa28.66■■■□□ 2.18
DDB1-220ENST00000542337 ZRANB1Q9UGI0 708 aa28.66■■■□□ 2.18
DDB1-220ENST00000542337 SBNO2Q9Y2G9 1366 aa28.64■■■□□ 2.18
DDB1-220ENST00000542337 ZBTB7CA1YPR0 619 aa28.63■■■□□ 2.17
DDB1-220ENST00000542337 USP35Q9P2H5 1018 aa28.63■■■□□ 2.17
DDB1-220ENST00000542337 BRWD3Q6RI45 1802 aa28.62■■■□□ 2.17
DDB1-220ENST00000542337 TTC21BQ7Z4L5 1316 aa28.62■■■□□ 2.17
DDB1-220ENST00000542337 NRKQ7Z2Y5 1582 aa28.6■■■□□ 2.17
DDB1-220ENST00000542337 TTC21AQ8NDW8 1320 aa28.6■■■□□ 2.17
DDB1-220ENST00000542337 SSH2Q76I76 1423 aa28.6■■■□□ 2.17
DDB1-220ENST00000542337 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
DDB1-220ENST00000542337 TMC1Q8TDI8 760 aa28.59■■■□□ 2.17
DDB1-220ENST00000542337 KTN1Q86UP2 1357 aaKnown RBP28.59■■■□□ 2.17
DDB1-220ENST00000542337 KCNH5Q8NCM2 988 aa28.58■■■□□ 2.17
DDB1-220ENST00000542337 SLC24A1O60721 1099 aa28.57■■■□□ 2.16
DDB1-220ENST00000542337 BARGINQ6ZT62 677 aa28.57■■■□□ 2.16
DDB1-220ENST00000542337 DEFB132Q7Z7B7 95 aa28.57■■■□□ 2.16
DDB1-220ENST00000542337 TCP11L2Q8N4U5 519 aa28.57■■■□□ 2.16
DDB1-220ENST00000542337 CAMTA1Q9Y6Y1 1673 aa28.55■■■□□ 2.16
DDB1-220ENST00000542337 BAG6P46379 1132 aa28.55■■■□□ 2.16
DDB1-220ENST00000542337 HDGFL2Q7Z4V5 671 aaPredicted RBP28.55■■■□□ 2.16
DDB1-220ENST00000542337 THRAP3Q9Y2W1 955 aaKnown RBP28.55■■■□□ 2.16
DDB1-220ENST00000542337 CPSF1Q10570 1443 aaKnown RBP28.54■■■□□ 2.16
DDB1-220ENST00000542337 AATKQ6ZMQ8 1374 aa28.54■■■□□ 2.16
DDB1-220ENST00000542337 PDE3BQ13370 1112 aa28.54■■■□□ 2.16
DDB1-220ENST00000542337 PUS7Q96PZ0 661 aaKnown RBP28.53■■■□□ 2.16
DDB1-220ENST00000542337 FAM182BQ5T319 152 aa28.52■■■□□ 2.16
DDB1-220ENST00000542337 FAM196AQ6ZSG2 479 aa28.52■■■□□ 2.16
DDB1-220ENST00000542337 TERF2IPQ9NYB0 399 aa28.51■■■□□ 2.15
DDB1-220ENST00000542337 SLIT3O75094 1523 aa28.51■■■□□ 2.15
DDB1-220ENST00000542337 SOX12O15370 315 aa28.5■■■□□ 2.15
DDB1-220ENST00000542337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.5■■■□□ 2.15
DDB1-220ENST00000542337 THSD7AQ9UPZ6 1657 aa28.5■■■□□ 2.15
DDB1-220ENST00000542337 ST20-MTHFSA0A0A6YYL1 179 aa28.49■■■□□ 2.15
DDB1-220ENST00000542337 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
DDB1-220ENST00000542337 COL5A2P05997 1499 aaPredicted RBP28.48■■■□□ 2.15
DDB1-220ENST00000542337 LMO7Q8WWI1 1683 aa28.48■■■□□ 2.15
DDB1-220ENST00000542337 TOM1L2Q6ZVM7 507 aa28.47■■■□□ 2.15
DDB1-220ENST00000542337 ARHGEF25Q86VW2 580 aa28.47■■■□□ 2.15
DDB1-220ENST00000542337 PIK3C2AO00443 1686 aa28.47■■■□□ 2.15
DDB1-220ENST00000542337 CRB1P82279 1406 aa28.46■■■□□ 2.15
DDB1-220ENST00000542337 AKAP12Q02952 1782 aa28.45■■■□□ 2.15
DDB1-220ENST00000542337 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
DDB1-220ENST00000542337 CSB-PGBD3P0DP91 1061 aa28.43■■■□□ 2.14
DDB1-220ENST00000542337 TESK2Q96S53 571 aa28.43■■■□□ 2.14
DDB1-220ENST00000542337 TIMELESSQ9UNS1 1208 aa28.42■■■□□ 2.14
DDB1-220ENST00000542337 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
DDB1-220ENST00000542337 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
DDB1-220ENST00000542337 C11orf95C9JLR9 678 aaPredicted RBP28.41■■■□□ 2.14
DDB1-220ENST00000542337 TRIM37O94972 964 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms