RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 CCDC148Q8NFR7 591 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 FKBP5Q13451 457 aaPredicted RBP16.73■□□□□ 0.27
TRPM1-203ENST00000542188 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
TRPM1-203ENST00000542188 TAF4BQ92750 862 aa16.72■□□□□ 0.27
TRPM1-203ENST00000542188 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
TRPM1-203ENST00000542188 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
TRPM1-203ENST00000542188 MCM3P25205 808 aa16.72■□□□□ 0.27
TRPM1-203ENST00000542188 LNPKQ9C0E8 428 aa16.72■□□□□ 0.27
TRPM1-203ENST00000542188 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
TRPM1-203ENST00000542188 KIF2AO00139 706 aaPredicted RBP16.71■□□□□ 0.27
TRPM1-203ENST00000542188 TMCO3Q6UWJ1 677 aa16.71■□□□□ 0.27
TRPM1-203ENST00000542188 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
TRPM1-203ENST00000542188 TICAM2Q86XR7 235 aa16.71■□□□□ 0.27
TRPM1-203ENST00000542188 MAP9Q49MG5 647 aa16.71■□□□□ 0.26
TRPM1-203ENST00000542188 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.26
TRPM1-203ENST00000542188 GRPEL1Q9HAV7 217 aa16.71■□□□□ 0.26
TRPM1-203ENST00000542188 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
TRPM1-203ENST00000542188 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
TRPM1-203ENST00000542188 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
TRPM1-203ENST00000542188 GNAI1P63096 354 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
TRPM1-203ENST00000542188 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
TRPM1-203ENST00000542188 UBXN4Q92575 508 aa16.69■□□□□ 0.26
TRPM1-203ENST00000542188 MSH5O43196 834 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 EVA1CP58658 441 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 FYB1O15117 783 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 FIBPO43427 364 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 RIPK4P57078 832 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 APAF1O14727 1248 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
TRPM1-203ENST00000542188 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
TRPM1-203ENST00000542188 KIF3BO15066 747 aa16.67■□□□□ 0.26
TRPM1-203ENST00000542188 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
TRPM1-203ENST00000542188 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
TRPM1-203ENST00000542188 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
TRPM1-203ENST00000542188 NEBLO76041 1014 aa16.66■□□□□ 0.26
TRPM1-203ENST00000542188 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
TRPM1-203ENST00000542188 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
TRPM1-203ENST00000542188 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
TRPM1-203ENST00000542188 KIAA1328Q86T90 577 aa16.66■□□□□ 0.26
TRPM1-203ENST00000542188 RSPH4AQ5TD94 716 aa16.66■□□□□ 0.26
TRPM1-203ENST00000542188 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
TRPM1-203ENST00000542188 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
TRPM1-203ENST00000542188 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 NEK4P51957 841 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
TRPM1-203ENST00000542188 ATP2B1P20020 1258 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 CETN2P41208 172 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 CEP57L1Q8IYX8 460 aa16.65■□□□□ 0.26
TRPM1-203ENST00000542188 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
TRPM1-203ENST00000542188 MYZAPP0CAP1 466 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 KRT85P78386 507 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
TRPM1-203ENST00000542188 FEZ1Q99689 392 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 CFAP57Q96MR6 1250 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 ANKRD18BA2A2Z9 1011 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
TRPM1-203ENST00000542188 NOL7Q9UMY1 257 aaKnown RBP16.64■□□□□ 0.25
TRPM1-203ENST00000542188 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
TRPM1-203ENST00000542188 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
TRPM1-203ENST00000542188 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
TRPM1-203ENST00000542188 KDM4AO75164 1064 aa16.63■□□□□ 0.25
TRPM1-203ENST00000542188 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
TRPM1-203ENST00000542188 ARHGAP29Q52LW3 1261 aa16.63■□□□□ 0.25
TRPM1-203ENST00000542188 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
TRPM1-203ENST00000542188 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
TRPM1-203ENST00000542188 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 ME1P48163 572 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 FILIP1Q7Z7B0 1213 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 ESPNB1AK53 854 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
TRPM1-203ENST00000542188 IMMTQ16891 758 aaKnown RBP16.62■□□□□ 0.25
TRPM1-203ENST00000542188 GPATCH11Q8N954 259 aa16.62■□□□□ 0.25
TRPM1-203ENST00000542188 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
TRPM1-203ENST00000542188 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
TRPM1-203ENST00000542188 MTMR7Q9Y216 660 aa16.61■□□□□ 0.25
TRPM1-203ENST00000542188 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
TRPM1-203ENST00000542188 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
TRPM1-203ENST00000542188 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
TRPM1-203ENST00000542188 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
TRPM1-203ENST00000542188 RNF187Q5TA31 235 aaPredicted RBP16.6■□□□□ 0.25
TRPM1-203ENST00000542188 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
TRPM1-203ENST00000542188 GNAI3P08754 354 aa16.6■□□□□ 0.25
TRPM1-203ENST00000542188 CASQ1P31415 396 aa16.6■□□□□ 0.25
TRPM1-203ENST00000542188 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
TRPM1-203ENST00000542188 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
TRPM1-203ENST00000542188 POLR3GO15318 223 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms