RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 DISP2A7MBM2 1401 aa22.95■■□□□ 1.26
CD4-210ENST00000541982 NGDNQ8NEJ9 315 aaKnown RBP22.93■■□□□ 1.26
CD4-210ENST00000541982 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
CD4-210ENST00000541982 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
CD4-210ENST00000541982 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
CD4-210ENST00000541982 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
CD4-210ENST00000541982 R3HDM1Q15032 1099 aaKnown RBP22.92■■□□□ 1.26
CD4-210ENST00000541982 THSD7AQ9UPZ6 1657 aa22.92■■□□□ 1.26
CD4-210ENST00000541982 MINK1Q8N4C8 1332 aaPredicted RBP22.91■■□□□ 1.26
CD4-210ENST00000541982 PAK3O75914 559 aaPredicted RBP22.91■■□□□ 1.26
CD4-210ENST00000541982 FAM182BQ5T319 152 aa22.91■■□□□ 1.26
CD4-210ENST00000541982 ADGRB1O14514 1584 aa22.91■■□□□ 1.26
CD4-210ENST00000541982 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
CD4-210ENST00000541982 TNS1Q9HBL0 1735 aaKnown RBP22.9■■□□□ 1.26
CD4-210ENST00000541982 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
CD4-210ENST00000541982 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.26
CD4-210ENST00000541982 FAM196AQ6ZSG2 479 aa22.89■■□□□ 1.25
CD4-210ENST00000541982 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
CD4-210ENST00000541982 EZH2Q15910 746 aaKnown RBP22.87■■□□□ 1.25
CD4-210ENST00000541982 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
CD4-210ENST00000541982 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
CD4-210ENST00000541982 STAC3Q96MF2 364 aa22.85■■□□□ 1.25
CD4-210ENST00000541982 CAMKK2Q96RR4 588 aa22.85■■□□□ 1.25
CD4-210ENST00000541982 TRIM37O94972 964 aa22.84■■□□□ 1.25
CD4-210ENST00000541982 KIAA0232Q92628 1395 aa22.84■■□□□ 1.25
CD4-210ENST00000541982 ATP7BP35670 1465 aa22.82■■□□□ 1.24
CD4-210ENST00000541982 APBA3O96018 575 aa22.82■■□□□ 1.24
CD4-210ENST00000541982 STRN4Q9NRL3 753 aa22.82■■□□□ 1.24
CD4-210ENST00000541982 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
CD4-210ENST00000541982 EVA1CP58658 441 aa22.8■■□□□ 1.24
CD4-210ENST00000541982 CHRNA2Q15822 529 aa22.8■■□□□ 1.24
CD4-210ENST00000541982 NUDT16Q96DE0 195 aaKnown RBP22.8■■□□□ 1.24
CD4-210ENST00000541982 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
CD4-210ENST00000541982 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
CD4-210ENST00000541982 BARGINQ6ZT62 677 aa22.79■■□□□ 1.24
CD4-210ENST00000541982 DCAF11Q8TEB1 546 aa22.79■■□□□ 1.24
CD4-210ENST00000541982 ZC3H6P61129 1189 aaKnown RBP22.78■■□□□ 1.24
CD4-210ENST00000541982 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
CD4-210ENST00000541982 NBPF14Q5TI25 921 aa22.77■■□□□ 1.24
CD4-210ENST00000541982 USP35Q9P2H5 1018 aa22.76■■□□□ 1.23
CD4-210ENST00000541982 ARHGEF28Q8N1W1 1705 aaKnown RBP22.75■■□□□ 1.23
CD4-210ENST00000541982 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
CD4-210ENST00000541982 RREB1Q92766 1687 aa22.74■■□□□ 1.23
CD4-210ENST00000541982 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
CD4-210ENST00000541982 NUTM2GQ5VZR2 741 aa22.73■■□□□ 1.23
CD4-210ENST00000541982 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
CD4-210ENST00000541982 C11orf95C9JLR9 678 aaPredicted RBP22.72■■□□□ 1.23
CD4-210ENST00000541982 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
CD4-210ENST00000541982 CDK19Q9BWU1 502 aa22.72■■□□□ 1.23
CD4-210ENST00000541982 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
CD4-210ENST00000541982 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
CD4-210ENST00000541982 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
CD4-210ENST00000541982 ACEP12821 1306 aa22.71■■□□□ 1.23
CD4-210ENST00000541982 ABTB2Q8N961 1025 aa22.7■■□□□ 1.22
CD4-210ENST00000541982 CPDO75976 1380 aa22.7■■□□□ 1.22
CD4-210ENST00000541982 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
CD4-210ENST00000541982 YY1P25490 414 aa22.69■■□□□ 1.22
CD4-210ENST00000541982 LARP1Q6PKG0 1096 aaKnown RBP22.69■■□□□ 1.22
CD4-210ENST00000541982 CAMTA1Q9Y6Y1 1673 aa22.68■■□□□ 1.22
CD4-210ENST00000541982 NRKQ7Z2Y5 1582 aa22.68■■□□□ 1.22
CD4-210ENST00000541982 PLEKHG3A1L390 1219 aa22.68■■□□□ 1.22
CD4-210ENST00000541982 PPP1R1BQ9UD71 204 aaPredicted RBP22.68■■□□□ 1.22
CD4-210ENST00000541982 TOPAZ1Q8N9V7 1692 aa22.68■■□□□ 1.22
CD4-210ENST00000541982 SPON1Q9HCB6 807 aa22.67■■□□□ 1.22
CD4-210ENST00000541982 LMO7Q8WWI1 1683 aa22.66■■□□□ 1.22
CD4-210ENST00000541982 NLRP13Q86W25 1043 aa22.66■■□□□ 1.22
CD4-210ENST00000541982 USP19O94966 1318 aa22.65■■□□□ 1.22
CD4-210ENST00000541982 KCNQ2O43526 872 aa22.64■■□□□ 1.21
CD4-210ENST00000541982 PARP4Q9UKK3 1724 aaKnown RBP22.64■■□□□ 1.21
CD4-210ENST00000541982 GCP02774 474 aa22.62■■□□□ 1.21
CD4-210ENST00000541982 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
CD4-210ENST00000541982 BRD4O60885 1362 aaPredicted RBP22.61■■□□□ 1.21
CD4-210ENST00000541982 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
CD4-210ENST00000541982 KIAA1210Q9ULL0 1709 aa22.6■■□□□ 1.21
CD4-210ENST00000541982 OVOS2A0A0G2JMS6 1433 aa22.59■■□□□ 1.21
CD4-210ENST00000541982 OVOS2A0A0J9YW53 1432 aa22.59■■□□□ 1.21
CD4-210ENST00000541982 CRB1P82279 1406 aa22.59■■□□□ 1.21
CD4-210ENST00000541982 OVOS2Q6IE36 1432 aa22.59■■□□□ 1.21
CD4-210ENST00000541982 RGPD3A6NKT7 1758 aaPredicted RBP22.59■■□□□ 1.21
CD4-210ENST00000541982 RGPD4Q7Z3J3 1758 aa22.59■■□□□ 1.21
CD4-210ENST00000541982 PLSCR1O15162 318 aa22.58■■□□□ 1.21
CD4-210ENST00000541982 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
CD4-210ENST00000541982 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
CD4-210ENST00000541982 SBF2Q86WG5 1849 aa22.56■■□□□ 1.2
CD4-210ENST00000541982 DDB1Q16531 1140 aa22.55■■□□□ 1.2
CD4-210ENST00000541982 PEAK1Q9H792 1746 aa22.54■■□□□ 1.2
CD4-210ENST00000541982 AATKQ6ZMQ8 1374 aa22.54■■□□□ 1.2
CD4-210ENST00000541982 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
CD4-210ENST00000541982 NLRP6P59044 892 aa22.52■■□□□ 1.2
CD4-210ENST00000541982 BCL11BQ9C0K0 894 aaPredicted RBP22.52■■□□□ 1.2
CD4-210ENST00000541982 TOM1L2Q6ZVM7 507 aa22.51■■□□□ 1.19
CD4-210ENST00000541982 CDCA7Q9BWT1 371 aaPredicted RBP22.51■■□□□ 1.19
CD4-210ENST00000541982 CENPJQ9HC77 1338 aaPredicted RBP22.51■■□□□ 1.19
CD4-210ENST00000541982 LRRC37A3O60309 1634 aa22.5■■□□□ 1.19
CD4-210ENST00000541982 CABP2Q9NPB3 220 aa22.49■■□□□ 1.19
CD4-210ENST00000541982 SLIT3O75094 1523 aa22.48■■□□□ 1.19
CD4-210ENST00000541982 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
CD4-210ENST00000541982 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
CD4-210ENST00000541982 USP6P35125 1406 aa22.48■■□□□ 1.19
CD4-210ENST00000541982 BCL9O00512 1426 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms