RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 STAC3Q96MF2 364 aa29.37■■■□□ 2.29
LPCAT3-210ENST00000540090 SPATA31A5Q5VU36 1347 aa29.36■■■□□ 2.29
LPCAT3-210ENST00000540090 SPATA31A7Q8IWB4 1347 aa29.36■■■□□ 2.29
LPCAT3-210ENST00000540090 TULP4Q9NRJ4 1543 aa29.35■■■□□ 2.29
LPCAT3-210ENST00000540090 NRAPQ86VF7 1730 aa29.34■■■□□ 2.29
LPCAT3-210ENST00000540090 ALS2Q96Q42 1657 aa29.34■■■□□ 2.29
LPCAT3-210ENST00000540090 PAK3O75914 559 aaPredicted RBP29.33■■■□□ 2.29
LPCAT3-210ENST00000540090 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
LPCAT3-210ENST00000540090 PRDM11Q9NQV5 511 aa29.31■■■□□ 2.28
LPCAT3-210ENST00000540090 PSDA5PKW4 1024 aaPredicted RBP29.3■■■□□ 2.28
LPCAT3-210ENST00000540090 EN1Q05925 392 aaPredicted RBP29.3■■■□□ 2.28
LPCAT3-210ENST00000540090 HRCP23327 699 aa29.29■■■□□ 2.28
LPCAT3-210ENST00000540090 FAM182BQ5T319 152 aa29.29■■■□□ 2.28
LPCAT3-210ENST00000540090 NUDT16Q96DE0 195 aaKnown RBP29.28■■■□□ 2.28
LPCAT3-210ENST00000540090 LRP5O75197 1615 aa29.25■■■□□ 2.27
LPCAT3-210ENST00000540090 SPATA31A1Q5TZJ5 1347 aa29.23■■■□□ 2.27
LPCAT3-210ENST00000540090 KIAA0232Q92628 1395 aa29.23■■■□□ 2.27
LPCAT3-210ENST00000540090 DISP2A7MBM2 1401 aa29.21■■■□□ 2.27
LPCAT3-210ENST00000540090 CHRNA2Q15822 529 aa29.21■■■□□ 2.27
LPCAT3-210ENST00000540090 CDK19Q9BWU1 502 aa29.21■■■□□ 2.27
LPCAT3-210ENST00000540090 ATP7BP35670 1465 aa29.21■■■□□ 2.27
LPCAT3-210ENST00000540090 CRYBG1Q9Y4K1 1723 aa29.2■■■□□ 2.27
LPCAT3-210ENST00000540090 THSD7AQ9UPZ6 1657 aa29.19■■■□□ 2.26
LPCAT3-210ENST00000540090 ZC3H6P61129 1189 aaKnown RBP29.18■■■□□ 2.26
LPCAT3-210ENST00000540090 FAM196AQ6ZSG2 479 aa29.18■■■□□ 2.26
LPCAT3-210ENST00000540090 STRN4Q9NRL3 753 aa29.18■■■□□ 2.26
LPCAT3-210ENST00000540090 R3HDM1Q15032 1099 aaKnown RBP29.17■■■□□ 2.26
LPCAT3-210ENST00000540090 NBPF8Q3BBV2 869 aa29.17■■■□□ 2.26
LPCAT3-210ENST00000540090 CCDC61Q9Y6R9 512 aa29.17■■■□□ 2.26
LPCAT3-210ENST00000540090 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
LPCAT3-210ENST00000540090 EZH2Q15910 746 aaKnown RBP29.16■■■□□ 2.26
LPCAT3-210ENST00000540090 NUTM2GQ5VZR2 741 aa29.16■■■□□ 2.26
LPCAT3-210ENST00000540090 RGPD1P0DJD0 1748 aa29.16■■■□□ 2.26
LPCAT3-210ENST00000540090 PLEKHG3A1L390 1219 aa29.15■■■□□ 2.26
LPCAT3-210ENST00000540090 TRIM37O94972 964 aa29.15■■■□□ 2.26
LPCAT3-210ENST00000540090 CAMKK2Q96RR4 588 aa29.15■■■□□ 2.26
LPCAT3-210ENST00000540090 ACEP12821 1306 aa29.15■■■□□ 2.26
LPCAT3-210ENST00000540090 ARHGEF28Q8N1W1 1705 aaKnown RBP29.12■■■□□ 2.25
LPCAT3-210ENST00000540090 EVA1CP58658 441 aa29.12■■■□□ 2.25
LPCAT3-210ENST00000540090 BARGINQ6ZT62 677 aa29.12■■■□□ 2.25
LPCAT3-210ENST00000540090 USP35Q9P2H5 1018 aa29.1■■■□□ 2.25
LPCAT3-210ENST00000540090 ITSN1Q15811 1721 aa29.1■■■□□ 2.25
LPCAT3-210ENST00000540090 ABTB2Q8N961 1025 aa29.09■■■□□ 2.25
LPCAT3-210ENST00000540090 APBA3O96018 575 aa29.08■■■□□ 2.25
LPCAT3-210ENST00000540090 PDE3BQ13370 1112 aa29.07■■■□□ 2.24
LPCAT3-210ENST00000540090 SSH2Q76I76 1423 aa29.07■■■□□ 2.24
LPCAT3-210ENST00000540090 TNS1Q9HBL0 1735 aaKnown RBP29.06■■■□□ 2.24
LPCAT3-210ENST00000540090 PHRF1Q9P1Y6 1649 aaKnown RBP29.06■■■□□ 2.24
LPCAT3-210ENST00000540090 PARD3Q8TEW0 1356 aa29.06■■■□□ 2.24
LPCAT3-210ENST00000540090 LARP1Q6PKG0 1096 aaKnown RBP29.06■■■□□ 2.24
LPCAT3-210ENST00000540090 CPDO75976 1380 aa29.05■■■□□ 2.24
LPCAT3-210ENST00000540090 TCP11L2Q8N4U5 519 aa29.05■■■□□ 2.24
LPCAT3-210ENST00000540090 USP19O94966 1318 aa29.04■■■□□ 2.24
LPCAT3-210ENST00000540090 CAMTA1Q9Y6Y1 1673 aa29.03■■■□□ 2.24
LPCAT3-210ENST00000540090 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
LPCAT3-210ENST00000540090 NLRP13Q86W25 1043 aa29.02■■■□□ 2.24
LPCAT3-210ENST00000540090 GCP02774 474 aa29.01■■■□□ 2.23
LPCAT3-210ENST00000540090 THRAP3Q9Y2W1 955 aaKnown RBP29.01■■■□□ 2.23
LPCAT3-210ENST00000540090 TOPAZ1Q8N9V7 1692 aa28.99■■■□□ 2.23
LPCAT3-210ENST00000540090 NRKQ7Z2Y5 1582 aa28.97■■■□□ 2.23
LPCAT3-210ENST00000540090 SRPK2P78362 688 aaKnown RBP28.97■■■□□ 2.23
LPCAT3-210ENST00000540090 CABP2Q9NPB3 220 aa28.95■■■□□ 2.22
LPCAT3-210ENST00000540090 PPIP5K1Q6PFW1 1433 aa28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 KIAA1210Q9ULL0 1709 aa28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 LMO7Q8WWI1 1683 aa28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 BRD4O60885 1362 aaPredicted RBP28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 NBPF14Q5TI25 921 aa28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 CENPJQ9HC77 1338 aaPredicted RBP28.94■■■□□ 2.22
LPCAT3-210ENST00000540090 C11orf95C9JLR9 678 aaPredicted RBP28.92■■■□□ 2.22
LPCAT3-210ENST00000540090 COL5A2P05997 1499 aaPredicted RBP28.91■■■□□ 2.22
LPCAT3-210ENST00000540090 CABP1Q9NZU7 370 aa28.89■■■□□ 2.22
LPCAT3-210ENST00000540090 NLRP6P59044 892 aa28.88■■■□□ 2.21
LPCAT3-210ENST00000540090 CRB1P82279 1406 aa28.87■■■□□ 2.21
LPCAT3-210ENST00000540090 AATKQ6ZMQ8 1374 aa28.87■■■□□ 2.21
LPCAT3-210ENST00000540090 RREB1Q92766 1687 aa28.86■■■□□ 2.21
LPCAT3-210ENST00000540090 USP6P35125 1406 aa28.85■■■□□ 2.21
LPCAT3-210ENST00000540090 ZBTB7CA1YPR0 619 aa28.83■■■□□ 2.21
LPCAT3-210ENST00000540090 PLSCR1O15162 318 aa28.82■■■□□ 2.2
LPCAT3-210ENST00000540090 NUP188Q5SRE5 1749 aa28.81■■■□□ 2.2
LPCAT3-210ENST00000540090 PARP4Q9UKK3 1724 aaKnown RBP28.81■■■□□ 2.2
LPCAT3-210ENST00000540090 DDB1Q16531 1140 aa28.81■■■□□ 2.2
LPCAT3-210ENST00000540090 SPON1Q9HCB6 807 aa28.81■■■□□ 2.2
LPCAT3-210ENST00000540090 OVOS2A0A0G2JMS6 1433 aa28.8■■■□□ 2.2
LPCAT3-210ENST00000540090 OVOS2A0A0J9YW53 1432 aa28.8■■■□□ 2.2
LPCAT3-210ENST00000540090 OVOS2Q6IE36 1432 aa28.8■■■□□ 2.2
LPCAT3-210ENST00000540090 TOM1L2Q6ZVM7 507 aa28.8■■■□□ 2.2
LPCAT3-210ENST00000540090 KCNQ2O43526 872 aa28.79■■■□□ 2.2
LPCAT3-210ENST00000540090 SLIT3O75094 1523 aa28.79■■■□□ 2.2
LPCAT3-210ENST00000540090 AXIN2Q9Y2T1 843 aa28.78■■■□□ 2.2
LPCAT3-210ENST00000540090 BCL11BQ9C0K0 894 aaPredicted RBP28.77■■■□□ 2.2
LPCAT3-210ENST00000540090 EVC2Q86UK5 1308 aa28.76■■■□□ 2.19
LPCAT3-210ENST00000540090 WDR17Q8IZU2 1322 aa28.75■■■□□ 2.19
LPCAT3-210ENST00000540090 L3MBTL2Q969R5 705 aa28.75■■■□□ 2.19
LPCAT3-210ENST00000540090 ZNF692Q9BU19 519 aaPredicted RBP28.75■■■□□ 2.19
LPCAT3-210ENST00000540090 ARHGEF25Q86VW2 580 aa28.74■■■□□ 2.19
LPCAT3-210ENST00000540090 CDCA7Q9BWT1 371 aaPredicted RBP28.74■■■□□ 2.19
LPCAT3-210ENST00000540090 PPP1R1BQ9UD71 204 aaPredicted RBP28.74■■■□□ 2.19
LPCAT3-210ENST00000540090 PEAK1Q9H792 1746 aa28.74■■■□□ 2.19
LPCAT3-210ENST00000540090 PTF1AQ7RTS3 328 aa28.73■■■□□ 2.19
LPCAT3-210ENST00000540090 MARCH10Q8NA82 808 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms