RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
CYB561A3-213ENST00000539890 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
CYB561A3-213ENST00000539890 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
CYB561A3-213ENST00000539890 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
CYB561A3-213ENST00000539890 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
CYB561A3-213ENST00000539890 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
CYB561A3-213ENST00000539890 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
CYB561A3-213ENST00000539890 HSPA5P11021 654 aaKnown RBP17.43■□□□□ 0.38
CYB561A3-213ENST00000539890 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
CYB561A3-213ENST00000539890 LRP6O75581 1613 aa17.42■□□□□ 0.38
CYB561A3-213ENST00000539890 AFF2P51816 1311 aa17.42■□□□□ 0.38
CYB561A3-213ENST00000539890 NLRP6P59044 892 aa17.41■□□□□ 0.38
CYB561A3-213ENST00000539890 USP21Q9UK80 565 aa17.41■□□□□ 0.38
CYB561A3-213ENST00000539890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
CYB561A3-213ENST00000539890 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
CYB561A3-213ENST00000539890 USP6P35125 1406 aa17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 RGS17Q9UGC6 210 aaPredicted RBP17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
CYB561A3-213ENST00000539890 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
CYB561A3-213ENST00000539890 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
CYB561A3-213ENST00000539890 RXRBP28702 533 aa17.36■□□□□ 0.37
CYB561A3-213ENST00000539890 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
CYB561A3-213ENST00000539890 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
CYB561A3-213ENST00000539890 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
CYB561A3-213ENST00000539890 FNBP4Q8N3X1 1017 aaPredicted RBP17.35■□□□□ 0.37
CYB561A3-213ENST00000539890 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
CYB561A3-213ENST00000539890 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
CYB561A3-213ENST00000539890 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
CYB561A3-213ENST00000539890 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 SOX12O15370 315 aa17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 GCP02774 474 aa17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 ILDR2Q71H61 639 aa17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 KCNH5Q8NCM2 988 aa17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 TRPM3Q9HCF6 1732 aaPredicted RBP17.33■□□□□ 0.36
CYB561A3-213ENST00000539890 EVA1CP58658 441 aa17.32■□□□□ 0.36
CYB561A3-213ENST00000539890 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
CYB561A3-213ENST00000539890 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
CYB561A3-213ENST00000539890 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
CYB561A3-213ENST00000539890 BTG4Q9NY30 223 aa17.31■□□□□ 0.36
CYB561A3-213ENST00000539890 NME9Q86XW9 330 aa17.3■□□□□ 0.36
CYB561A3-213ENST00000539890 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
CYB561A3-213ENST00000539890 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
CYB561A3-213ENST00000539890 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
CYB561A3-213ENST00000539890 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
CYB561A3-213ENST00000539890 COG3Q96JB2 828 aa17.29■□□□□ 0.36
CYB561A3-213ENST00000539890 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
CYB561A3-213ENST00000539890 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CYB561A3-213ENST00000539890 SSH2Q76I76 1423 aa17.28■□□□□ 0.36
CYB561A3-213ENST00000539890 USP19O94966 1318 aa17.27■□□□□ 0.36
CYB561A3-213ENST00000539890 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
CYB561A3-213ENST00000539890 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
CYB561A3-213ENST00000539890 GJD4Q96KN9 370 aaPredicted RBP17.25■□□□□ 0.35
CYB561A3-213ENST00000539890 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
CYB561A3-213ENST00000539890 A0A0G2JS52 829 aa17.24■□□□□ 0.35
CYB561A3-213ENST00000539890 MYT1Q01538 1121 aa17.24■□□□□ 0.35
CYB561A3-213ENST00000539890 VPS72Q15906 364 aa17.24■□□□□ 0.35
CYB561A3-213ENST00000539890 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
CYB561A3-213ENST00000539890 BCL9LQ86UU0 1499 aa17.24■□□□□ 0.35
CYB561A3-213ENST00000539890 PANK3Q9H999 370 aa17.23■□□□□ 0.35
CYB561A3-213ENST00000539890 SLIT2O94813 1529 aa17.22■□□□□ 0.35
CYB561A3-213ENST00000539890 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
CYB561A3-213ENST00000539890 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
CYB561A3-213ENST00000539890 CPDO75976 1380 aa17.22■□□□□ 0.35
CYB561A3-213ENST00000539890 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
CYB561A3-213ENST00000539890 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
CYB561A3-213ENST00000539890 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
CYB561A3-213ENST00000539890 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
CYB561A3-213ENST00000539890 ATRNO75882 1429 aa17.21■□□□□ 0.34
CYB561A3-213ENST00000539890 FYB1O15117 783 aa17.2■□□□□ 0.34
CYB561A3-213ENST00000539890 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
CYB561A3-213ENST00000539890 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
CYB561A3-213ENST00000539890 MON2Q7Z3U7 1717 aa17.2■□□□□ 0.34
CYB561A3-213ENST00000539890 KIF7Q2M1P5 1343 aa17.2■□□□□ 0.34
CYB561A3-213ENST00000539890 SOCS7O14512 581 aa17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 COL14A1Q05707 1796 aaKnown RBP17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
CYB561A3-213ENST00000539890 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
CYB561A3-213ENST00000539890 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
CYB561A3-213ENST00000539890 AMPHP49418 695 aa17.18■□□□□ 0.34
CYB561A3-213ENST00000539890 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
CYB561A3-213ENST00000539890 TOM1L2Q6ZVM7 507 aa17.17■□□□□ 0.34
CYB561A3-213ENST00000539890 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
CYB561A3-213ENST00000539890 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
CYB561A3-213ENST00000539890 SLIT3O75094 1523 aa17.16■□□□□ 0.34
CYB561A3-213ENST00000539890 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-213ENST00000539890 SPATA31A5Q5VU36 1347 aa17.15■□□□□ 0.34
CYB561A3-213ENST00000539890 SPATA31A7Q8IWB4 1347 aa17.15■□□□□ 0.34
CYB561A3-213ENST00000539890 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
CYB561A3-213ENST00000539890 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
CYB561A3-213ENST00000539890 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
CYB561A3-213ENST00000539890 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
CYB561A3-213ENST00000539890 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-213ENST00000539890 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
CYB561A3-213ENST00000539890 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms