RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C6orf229H3BNL8 230 aa6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 TMEM132AQ24JP5 1023 aa6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 KRI1Q8N9T8 703 aaKnown RBP6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 HLA-CQ95604 372 aa6.78□□□□□ -1.32
AC055720.1-201ENST00000539552 SYMPKQ92797 1274 aaKnown RBP6.77□□□□□ -1.33
AC055720.1-201ENST00000539552 UNC93B1Q9H1C4 597 aa6.77□□□□□ -1.33
AC055720.1-201ENST00000539552 GUCA2AQ02747 115 aa6.76□□□□□ -1.33
AC055720.1-201ENST00000539552 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
AC055720.1-201ENST00000539552 FAM174AQ8TBP5 190 aa6.76□□□□□ -1.33
AC055720.1-201ENST00000539552 GPR37O15354 613 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 IGHA1P01876 353 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 BMP2P12643 396 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 TIMP2P16035 220 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 MDM2Q00987 491 aaPredicted RBP6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 ARID5BQ14865 1188 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 GPAT2Q6NUI2 795 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 BAP1Q92560 729 aa6.75□□□□□ -1.33
AC055720.1-201ENST00000539552 PPFIA3O75145 1194 aa6.74□□□□□ -1.33
AC055720.1-201ENST00000539552 PTPRNQ16849 979 aa6.74□□□□□ -1.33
AC055720.1-201ENST00000539552 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
AC055720.1-201ENST00000539552 MPNDQ8N594 471 aa6.74□□□□□ -1.33
AC055720.1-201ENST00000539552 ZNF511Q8NB15 262 aa6.74□□□□□ -1.33
AC055720.1-201ENST00000539552 FDX1P10109 184 aa6.73□□□□□ -1.33
AC055720.1-201ENST00000539552 MAP2K5Q13163 448 aa6.73□□□□□ -1.33
AC055720.1-201ENST00000539552 ADAMTS8Q9UP79 889 aa6.73□□□□□ -1.33
AC055720.1-201ENST00000539552 CC2D2AQ9P2K1 1620 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 ZIC2O95409 532 aaPredicted RBP6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 MARSP56192 900 aaKnown RBP6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 FOXK2Q01167 660 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 KCNH2Q12809 1159 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 CNTNAP3Q9BZ76 1288 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 EVA1BQ9NVM1 165 aa6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 DNMT3AQ9Y6K1 912 aaPredicted RBP6.72□□□□□ -1.33
AC055720.1-201ENST00000539552 CTHP32929 405 aa6.71□□□□□ -1.34
AC055720.1-201ENST00000539552 CLCN1P35523 988 aa6.71□□□□□ -1.34
AC055720.1-201ENST00000539552 AGERQ15109 404 aa6.71□□□□□ -1.34
AC055720.1-201ENST00000539552 NISCHQ9Y2I1 1504 aa6.71□□□□□ -1.34
AC055720.1-201ENST00000539552 SPTLC1O15269 473 aa6.7□□□□□ -1.34
AC055720.1-201ENST00000539552 GPCPD1Q9NPB8 672 aa6.7□□□□□ -1.34
AC055720.1-201ENST00000539552 IRS1P35568 1242 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 GSK3AP49840 483 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 NR5A1Q13285 461 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 KANK3Q6NY19 840 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
AC055720.1-201ENST00000539552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.68□□□□□ -1.34
AC055720.1-201ENST00000539552 SCARF2Q96GP6 870 aaPredicted RBP6.68□□□□□ -1.34
AC055720.1-201ENST00000539552 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
AC055720.1-201ENST00000539552 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
AC055720.1-201ENST00000539552 ITPKCQ96DU7 683 aa6.67□□□□□ -1.34
AC055720.1-201ENST00000539552 IRF6O14896 467 aa6.66□□□□□ -1.34
AC055720.1-201ENST00000539552 PRR7Q8TB68 274 aa6.66□□□□□ -1.34
AC055720.1-201ENST00000539552 COL25A1Q9BXS0 654 aaPredicted RBP6.66□□□□□ -1.34
AC055720.1-201ENST00000539552 MINK1Q8N4C8 1332 aaPredicted RBP6.66□□□□□ -1.34
AC055720.1-201ENST00000539552 UNC13AQ9UPW8 1703 aa6.65□□□□□ -1.34
AC055720.1-201ENST00000539552 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
AC055720.1-201ENST00000539552 MTMR2Q13614 643 aa6.65□□□□□ -1.34
AC055720.1-201ENST00000539552 TSEN34Q9BSV6 310 aaKnown RBP6.65□□□□□ -1.34
AC055720.1-201ENST00000539552 FAM217BQ9NTX9 383 aaPredicted RBP6.65□□□□□ -1.34
AC055720.1-201ENST00000539552 DESI1Q6ICB0 168 aa6.64□□□□□ -1.35
AC055720.1-201ENST00000539552 MEIOBQ8N635 442 aa6.64□□□□□ -1.35
AC055720.1-201ENST00000539552 CDK15Q96Q40 435 aa6.64□□□□□ -1.35
AC055720.1-201ENST00000539552 KLF16Q9BXK1 252 aaPredicted RBP6.64□□□□□ -1.35
AC055720.1-201ENST00000539552 LMTK3Q96Q04 1460 aa6.64□□□□□ -1.35
AC055720.1-201ENST00000539552 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 SOCS7O14512 581 aa6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 ZNF385CQ66K41 422 aaPredicted RBP6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 BPHLQ86WA6 291 aaPredicted RBP6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 DNMT3LQ9UJW3 386 aa6.63□□□□□ -1.35
AC055720.1-201ENST00000539552 CDC14CA4D256 554 aa6.62□□□□□ -1.35
AC055720.1-201ENST00000539552 PTSQ03393 145 aa6.62□□□□□ -1.35
AC055720.1-201ENST00000539552 ENAMQ9NRM1 1142 aa6.62□□□□□ -1.35
AC055720.1-201ENST00000539552 PCDHGC3Q9UN70 934 aa6.62□□□□□ -1.35
AC055720.1-201ENST00000539552 KRT76Q01546 638 aa6.61□□□□□ -1.35
AC055720.1-201ENST00000539552 CCDC102AQ96A19 550 aa6.61□□□□□ -1.35
AC055720.1-201ENST00000539552 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
AC055720.1-201ENST00000539552 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 MSTNO14793 375 aa6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 SV2AQ7L0J3 742 aa6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 FOXJ1Q92949 421 aa6.6□□□□□ -1.35
AC055720.1-201ENST00000539552 NR3C2P08235 984 aa6.59□□□□□ -1.35
AC055720.1-201ENST00000539552 FSHRP23945 695 aa6.59□□□□□ -1.35
AC055720.1-201ENST00000539552 VASH1Q7L8A9 365 aaPredicted RBP6.59□□□□□ -1.35
AC055720.1-201ENST00000539552 CCDC155Q8N6L0 562 aa6.59□□□□□ -1.35
AC055720.1-201ENST00000539552 NANOS1Q8WY41 292 aaKnown RBP6.59□□□□□ -1.35
AC055720.1-201ENST00000539552 BICRAQ9NZM4 1560 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 PHF20L1A8MW92 1017 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 NDUFV2P19404 249 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 XP32Q5T750 250 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 PODNQ7Z5L7 613 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 ARMC2Q8NEN0 867 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 SPIRE2Q8WWL2 714 aa6.58□□□□□ -1.36
AC055720.1-201ENST00000539552 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms