RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
DDB1-214ENST00000539426 DEFB132Q7Z7B7 95 aa15.91■□□□□ 0.14
DDB1-214ENST00000539426 NGDNQ8NEJ9 315 aaKnown RBP15.91■□□□□ 0.14
DDB1-214ENST00000539426 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
DDB1-214ENST00000539426 TOPAZ1Q8N9V7 1692 aa15.91■□□□□ 0.14
DDB1-214ENST00000539426 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
DDB1-214ENST00000539426 KRT27Q7Z3Y8 459 aa15.89■□□□□ 0.13
DDB1-214ENST00000539426 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
DDB1-214ENST00000539426 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
DDB1-214ENST00000539426 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
DDB1-214ENST00000539426 FAM98CQ17RN3 349 aaKnown RBP15.88■□□□□ 0.13
DDB1-214ENST00000539426 A0A0G2JS52 829 aa15.86■□□□□ 0.13
DDB1-214ENST00000539426 MYT1Q01538 1121 aa15.86■□□□□ 0.13
DDB1-214ENST00000539426 CDK19Q9BWU1 502 aa15.86■□□□□ 0.13
DDB1-214ENST00000539426 THSD7AQ9UPZ6 1657 aa15.86■□□□□ 0.13
DDB1-214ENST00000539426 NBPF1Q3BBV0 1214 aa15.85■□□□□ 0.13
DDB1-214ENST00000539426 PRDM11Q9NQV5 511 aa15.85■□□□□ 0.13
DDB1-214ENST00000539426 SPATA31A5Q5VU36 1347 aa15.85■□□□□ 0.13
DDB1-214ENST00000539426 SPATA31A7Q8IWB4 1347 aa15.85■□□□□ 0.13
DDB1-214ENST00000539426 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
DDB1-214ENST00000539426 KIAA0232Q92628 1395 aa15.84■□□□□ 0.13
DDB1-214ENST00000539426 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
DDB1-214ENST00000539426 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
DDB1-214ENST00000539426 ACEP12821 1306 aa15.83■□□□□ 0.12
DDB1-214ENST00000539426 CHRNA2Q15822 529 aa15.82■□□□□ 0.12
DDB1-214ENST00000539426 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
DDB1-214ENST00000539426 RGPD1P0DJD0 1748 aa15.81■□□□□ 0.12
DDB1-214ENST00000539426 NBPF8Q3BBV2 869 aa15.81■□□□□ 0.12
DDB1-214ENST00000539426 FAM182BQ5T319 152 aa15.81■□□□□ 0.12
DDB1-214ENST00000539426 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
DDB1-214ENST00000539426 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
DDB1-214ENST00000539426 PLEKHG3A1L390 1219 aa15.8■□□□□ 0.12
DDB1-214ENST00000539426 QRICH2Q9H0J4 1663 aa15.79■□□□□ 0.12
DDB1-214ENST00000539426 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
DDB1-214ENST00000539426 ZC3H6P61129 1189 aaKnown RBP15.79■□□□□ 0.12
DDB1-214ENST00000539426 BAG6P46379 1132 aa15.78■□□□□ 0.12
DDB1-214ENST00000539426 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
DDB1-214ENST00000539426 LMO7Q8WWI1 1683 aa15.78■□□□□ 0.12
DDB1-214ENST00000539426 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
DDB1-214ENST00000539426 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.12
DDB1-214ENST00000539426 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
DDB1-214ENST00000539426 LRP5O75197 1615 aa15.76■□□□□ 0.11
DDB1-214ENST00000539426 USP19O94966 1318 aa15.76■□□□□ 0.11
DDB1-214ENST00000539426 EN1Q05925 392 aaPredicted RBP15.76■□□□□ 0.11
DDB1-214ENST00000539426 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
DDB1-214ENST00000539426 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
DDB1-214ENST00000539426 SRPK2P78362 688 aaKnown RBP15.75■□□□□ 0.11
DDB1-214ENST00000539426 ABTB2Q8N961 1025 aa15.75■□□□□ 0.11
DDB1-214ENST00000539426 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
DDB1-214ENST00000539426 DISP2A7MBM2 1401 aa15.74■□□□□ 0.11
DDB1-214ENST00000539426 CPDO75976 1380 aa15.74■□□□□ 0.11
DDB1-214ENST00000539426 TRPM1Q7Z4N2 1603 aa15.73■□□□□ 0.11
DDB1-214ENST00000539426 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
DDB1-214ENST00000539426 USP35Q9P2H5 1018 aa15.73■□□□□ 0.11
DDB1-214ENST00000539426 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
DDB1-214ENST00000539426 USP6P35125 1406 aa15.71■□□□□ 0.11
DDB1-214ENST00000539426 SIN3AQ96ST3 1273 aa15.71■□□□□ 0.11
DDB1-214ENST00000539426 TRIM37O94972 964 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 GCP02774 474 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 EVA1CP58658 441 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 BARGINQ6ZT62 677 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 COL5A2P05997 1499 aaPredicted RBP15.7■□□□□ 0.1
DDB1-214ENST00000539426 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
DDB1-214ENST00000539426 EZH2Q15910 746 aaKnown RBP15.69■□□□□ 0.1
DDB1-214ENST00000539426 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
DDB1-214ENST00000539426 BRD4O60885 1362 aaPredicted RBP15.69■□□□□ 0.1
DDB1-214ENST00000539426 SLIT3O75094 1523 aa15.68■□□□□ 0.1
DDB1-214ENST00000539426 PARP4Q9UKK3 1724 aaKnown RBP15.68■□□□□ 0.1
DDB1-214ENST00000539426 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
DDB1-214ENST00000539426 COL18A1P39060 1754 aa15.67■□□□□ 0.1
DDB1-214ENST00000539426 RREB1Q92766 1687 aa15.67■□□□□ 0.1
DDB1-214ENST00000539426 CAMKK2Q96RR4 588 aa15.67■□□□□ 0.1
DDB1-214ENST00000539426 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
DDB1-214ENST00000539426 R3HDM1Q15032 1099 aaKnown RBP15.66■□□□□ 0.1
DDB1-214ENST00000539426 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
DDB1-214ENST00000539426 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
DDB1-214ENST00000539426 NLRP6P59044 892 aa15.65■□□□□ 0.1
DDB1-214ENST00000539426 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
DDB1-214ENST00000539426 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
DDB1-214ENST00000539426 EVC2Q86UK5 1308 aa15.65■□□□□ 0.1
DDB1-214ENST00000539426 APBA3O96018 575 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 CRB1P82279 1406 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 PEAK1Q9H792 1746 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
DDB1-214ENST00000539426 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 LRRC37A3O60309 1634 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 WNK3Q9BYP7 1800 aa15.64■□□□□ 0.09
DDB1-214ENST00000539426 AATKQ6ZMQ8 1374 aa15.63■□□□□ 0.09
DDB1-214ENST00000539426 SBF2Q86WG5 1849 aa15.62■□□□□ 0.09
DDB1-214ENST00000539426 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
DDB1-214ENST00000539426 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
DDB1-214ENST00000539426 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
DDB1-214ENST00000539426 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
DDB1-214ENST00000539426 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
DDB1-214ENST00000539426 NFAT5O94916 1531 aa15.59■□□□□ 0.09
DDB1-214ENST00000539426 ARHGEF25Q86VW2 580 aa15.58■□□□□ 0.08
DDB1-214ENST00000539426 OVOS2A0A0G2JMS6 1433 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms