RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 R3HDM1Q15032 1099 aaKnown RBP21.78■■□□□ 1.08
CCDC144NL-202ENST00000539177 GPRASP1Q5JY77 1395 aa21.76■■□□□ 1.07
CCDC144NL-202ENST00000539177 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 PHRF1Q9P1Y6 1649 aaKnown RBP21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 SPATA31A5Q5VU36 1347 aa21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 SPATA31A7Q8IWB4 1347 aa21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
CCDC144NL-202ENST00000539177 PRR36Q9H6K5 1346 aa21.74■■□□□ 1.07
CCDC144NL-202ENST00000539177 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
CCDC144NL-202ENST00000539177 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
CCDC144NL-202ENST00000539177 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
CCDC144NL-202ENST00000539177 EZH2Q15910 746 aaKnown RBP21.72■■□□□ 1.07
CCDC144NL-202ENST00000539177 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
CCDC144NL-202ENST00000539177 PRDM11Q9NQV5 511 aa21.71■■□□□ 1.07
CCDC144NL-202ENST00000539177 RREB1Q92766 1687 aa21.69■■□□□ 1.06
CCDC144NL-202ENST00000539177 EIF3AQ14152 1382 aaKnown RBP21.69■■□□□ 1.06
CCDC144NL-202ENST00000539177 NUP188Q5SRE5 1749 aa21.69■■□□□ 1.06
CCDC144NL-202ENST00000539177 ARHGEF28Q8N1W1 1705 aaKnown RBP21.69■■□□□ 1.06
CCDC144NL-202ENST00000539177 NGDNQ8NEJ9 315 aaKnown RBP21.68■■□□□ 1.06
CCDC144NL-202ENST00000539177 TRIM37O94972 964 aa21.67■■□□□ 1.06
CCDC144NL-202ENST00000539177 STRN4Q9NRL3 753 aa21.67■■□□□ 1.06
CCDC144NL-202ENST00000539177 KIAA0232Q92628 1395 aa21.66■■□□□ 1.06
CCDC144NL-202ENST00000539177 CHRNA2Q15822 529 aa21.66■■□□□ 1.06
CCDC144NL-202ENST00000539177 SPATA31A1Q5TZJ5 1347 aa21.65■■□□□ 1.06
CCDC144NL-202ENST00000539177 WASLO00401 505 aaPredicted RBP21.65■■□□□ 1.06
CCDC144NL-202ENST00000539177 CAMKK2Q96RR4 588 aa21.63■■□□□ 1.05
CCDC144NL-202ENST00000539177 USP35Q9P2H5 1018 aa21.63■■□□□ 1.05
CCDC144NL-202ENST00000539177 ATP7BP35670 1465 aa21.63■■□□□ 1.05
CCDC144NL-202ENST00000539177 APBA3O96018 575 aa21.62■■□□□ 1.05
CCDC144NL-202ENST00000539177 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
CCDC144NL-202ENST00000539177 TOPAZ1Q8N9V7 1692 aa21.61■■□□□ 1.05
CCDC144NL-202ENST00000539177 ZC3H6P61129 1189 aaKnown RBP21.61■■□□□ 1.05
CCDC144NL-202ENST00000539177 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
CCDC144NL-202ENST00000539177 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
CCDC144NL-202ENST00000539177 NRKQ7Z2Y5 1582 aa21.6■■□□□ 1.05
CCDC144NL-202ENST00000539177 SSH2Q76I76 1423 aa21.57■■□□□ 1.04
CCDC144NL-202ENST00000539177 LMO7Q8WWI1 1683 aa21.56■■□□□ 1.04
CCDC144NL-202ENST00000539177 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
CCDC144NL-202ENST00000539177 NUDT16Q96DE0 195 aaKnown RBP21.56■■□□□ 1.04
CCDC144NL-202ENST00000539177 PARD3Q8TEW0 1356 aa21.56■■□□□ 1.04
CCDC144NL-202ENST00000539177 EVA1CP58658 441 aa21.55■■□□□ 1.04
CCDC144NL-202ENST00000539177 PDE3BQ13370 1112 aa21.55■■□□□ 1.04
CCDC144NL-202ENST00000539177 CAMTA1Q9Y6Y1 1673 aa21.55■■□□□ 1.04
CCDC144NL-202ENST00000539177 PARP4Q9UKK3 1724 aaKnown RBP21.54■■□□□ 1.04
CCDC144NL-202ENST00000539177 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
CCDC144NL-202ENST00000539177 YY1P25490 414 aa21.53■■□□□ 1.04
CCDC144NL-202ENST00000539177 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
CCDC144NL-202ENST00000539177 SBF2Q86WG5 1849 aa21.52■■□□□ 1.04
CCDC144NL-202ENST00000539177 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
CCDC144NL-202ENST00000539177 NBPF8Q3BBV2 869 aa21.5■■□□□ 1.03
CCDC144NL-202ENST00000539177 NBPF14Q5TI25 921 aa21.5■■□□□ 1.03
CCDC144NL-202ENST00000539177 ACEP12821 1306 aa21.5■■□□□ 1.03
CCDC144NL-202ENST00000539177 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
CCDC144NL-202ENST00000539177 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
CCDC144NL-202ENST00000539177 TCP11L2Q8N4U5 519 aa21.48■■□□□ 1.03
CCDC144NL-202ENST00000539177 PPP1R1BQ9UD71 204 aaPredicted RBP21.48■■□□□ 1.03
CCDC144NL-202ENST00000539177 PEAK1Q9H792 1746 aa21.47■■□□□ 1.03
CCDC144NL-202ENST00000539177 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
CCDC144NL-202ENST00000539177 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
CCDC144NL-202ENST00000539177 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
CCDC144NL-202ENST00000539177 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
CCDC144NL-202ENST00000539177 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
CCDC144NL-202ENST00000539177 COL5A2P05997 1499 aaPredicted RBP21.45■■□□□ 1.02
CCDC144NL-202ENST00000539177 SPON1Q9HCB6 807 aa21.44■■□□□ 1.02
CCDC144NL-202ENST00000539177 CPDO75976 1380 aa21.44■■□□□ 1.02
CCDC144NL-202ENST00000539177 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
CCDC144NL-202ENST00000539177 CASZ1Q86V15 1759 aa21.43■■□□□ 1.02
CCDC144NL-202ENST00000539177 ZBTB7CA1YPR0 619 aa21.43■■□□□ 1.02
CCDC144NL-202ENST00000539177 USP19O94966 1318 aa21.43■■□□□ 1.02
CCDC144NL-202ENST00000539177 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
CCDC144NL-202ENST00000539177 KCNQ2O43526 872 aa21.42■■□□□ 1.02
CCDC144NL-202ENST00000539177 CCDC61Q9Y6R9 512 aa21.42■■□□□ 1.02
CCDC144NL-202ENST00000539177 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
CCDC144NL-202ENST00000539177 OVOS2A0A0J9YW53 1432 aa21.4■■□□□ 1.02
CCDC144NL-202ENST00000539177 OVOS2Q6IE36 1432 aa21.4■■□□□ 1.02
CCDC144NL-202ENST00000539177 THRAP3Q9Y2W1 955 aaKnown RBP21.4■■□□□ 1.02
CCDC144NL-202ENST00000539177 RGPD5Q99666 1765 aa21.4■■□□□ 1.02
CCDC144NL-202ENST00000539177 CRB1P82279 1406 aa21.39■■□□□ 1.02
CCDC144NL-202ENST00000539177 PPIP5K1Q6PFW1 1433 aa21.39■■□□□ 1.02
CCDC144NL-202ENST00000539177 NINLQ9Y2I6 1382 aa21.39■■□□□ 1.02
CCDC144NL-202ENST00000539177 PLEKHG3A1L390 1219 aa21.39■■□□□ 1.01
CCDC144NL-202ENST00000539177 MYOM1P52179 1685 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 QRICH2Q9H0J4 1663 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 GCP02774 474 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 NLRP13Q86W25 1043 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 STAC3Q96MF2 364 aa21.38■■□□□ 1.01
CCDC144NL-202ENST00000539177 COL18A1P39060 1754 aa21.36■■□□□ 1.01
CCDC144NL-202ENST00000539177 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
CCDC144NL-202ENST00000539177 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
CCDC144NL-202ENST00000539177 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
CCDC144NL-202ENST00000539177 PTF1AQ7RTS3 328 aa21.34■■□□□ 1.01
CCDC144NL-202ENST00000539177 SLIT3O75094 1523 aa21.34■■□□□ 1.01
CCDC144NL-202ENST00000539177 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
CCDC144NL-202ENST00000539177 DDB1Q16531 1140 aa21.32■■□□□ 1
CCDC144NL-202ENST00000539177 PDGFDQ9GZP0 370 aaPredicted RBP21.32■■□□□ 1
CCDC144NL-202ENST00000539177 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
CCDC144NL-202ENST00000539177 NBPF1Q3BBV0 1214 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms