RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 TTC21BQ7Z4L5 1316 aa26.95■■□□□ 1.9
CDH5-202ENST00000539168 NUTM2FA1L443 756 aa26.93■■□□□ 1.9
CDH5-202ENST00000539168 NGDNQ8NEJ9 315 aaKnown RBP26.92■■□□□ 1.9
CDH5-202ENST00000539168 PNPLA6Q8IY17 1366 aa26.92■■□□□ 1.9
CDH5-202ENST00000539168 SSH2Q76I76 1423 aa26.92■■□□□ 1.9
CDH5-202ENST00000539168 NME9Q86XW9 330 aa26.91■■□□□ 1.9
CDH5-202ENST00000539168 NCOA3Q9Y6Q9 1424 aa26.9■■□□□ 1.9
CDH5-202ENST00000539168 RGPD8O14715 1765 aaPredicted RBP26.89■■□□□ 1.9
CDH5-202ENST00000539168 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
CDH5-202ENST00000539168 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
CDH5-202ENST00000539168 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
CDH5-202ENST00000539168 PROSER2Q86WR7 435 aaPredicted RBP26.87■■□□□ 1.89
CDH5-202ENST00000539168 LMTK3Q96Q04 1460 aa26.87■■□□□ 1.89
CDH5-202ENST00000539168 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
CDH5-202ENST00000539168 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
CDH5-202ENST00000539168 PMFBP1Q8TBY8 1022 aa26.85■■□□□ 1.89
CDH5-202ENST00000539168 OVOS2A0A0J9YW53 1432 aa26.85■■□□□ 1.89
CDH5-202ENST00000539168 OVOS2Q6IE36 1432 aa26.85■■□□□ 1.89
CDH5-202ENST00000539168 DIAPH1O60610 1272 aaKnown RBP26.85■■□□□ 1.89
CDH5-202ENST00000539168 POLKQ9UBT6 870 aa26.85■■□□□ 1.89
CDH5-202ENST00000539168 CDK12Q9NYV4 1490 aaPredicted RBP26.84■■□□□ 1.89
CDH5-202ENST00000539168 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
CDH5-202ENST00000539168 MAP2P11137 1827 aaKnown RBP26.83■■□□□ 1.89
CDH5-202ENST00000539168 PHF8Q9UPP1 1060 aa26.83■■□□□ 1.89
CDH5-202ENST00000539168 SUPT16HQ9Y5B9 1047 aaKnown RBP26.83■■□□□ 1.89
CDH5-202ENST00000539168 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
CDH5-202ENST00000539168 U2AF1L5P0DN76 240 aaPredicted RBP26.81■■□□□ 1.88
CDH5-202ENST00000539168 U2AF1Q01081 240 aaKnown RBP eCLIP26.81■■□□□ 1.88
CDH5-202ENST00000539168 CCDC146Q8IYE0 955 aa26.81■■□□□ 1.88
CDH5-202ENST00000539168 C19orf44Q9H6X5 657 aa26.81■■□□□ 1.88
CDH5-202ENST00000539168 APAF1O14727 1248 aa26.8■■□□□ 1.88
CDH5-202ENST00000539168 ZNF521Q96K83 1311 aa26.8■■□□□ 1.88
CDH5-202ENST00000539168 HSPA2P54652 639 aa26.79■■□□□ 1.88
CDH5-202ENST00000539168 DCCP43146 1447 aa26.79■■□□□ 1.88
CDH5-202ENST00000539168 LRRC7Q96NW7 1537 aa26.79■■□□□ 1.88
CDH5-202ENST00000539168 GOLGA2Q08379 1002 aa26.77■■□□□ 1.88
CDH5-202ENST00000539168 ERICH6BQ5W0A0 696 aa26.77■■□□□ 1.88
CDH5-202ENST00000539168 ZRANB1Q9UGI0 708 aa26.77■■□□□ 1.88
CDH5-202ENST00000539168 USP54Q70EL1 1684 aa26.76■■□□□ 1.87
CDH5-202ENST00000539168 FKBP8Q14318 412 aa26.76■■□□□ 1.87
CDH5-202ENST00000539168 SENP3-EIF4A1A0A087X0R7 540 aa26.75■■□□□ 1.87
CDH5-202ENST00000539168 U2SURPO15042 1029 aaKnown RBP26.75■■□□□ 1.87
CDH5-202ENST00000539168 IQSEC2Q5JU85 1478 aa26.75■■□□□ 1.87
CDH5-202ENST00000539168 CCDC27Q2M243 656 aa26.74■■□□□ 1.87
CDH5-202ENST00000539168 PPM1GO15355 546 aaPredicted RBP26.73■■□□□ 1.87
CDH5-202ENST00000539168 ESCO1Q5FWF5 840 aa26.73■■□□□ 1.87
CDH5-202ENST00000539168 STRCQ7RTU9 1775 aa26.73■■□□□ 1.87
CDH5-202ENST00000539168 FCHSD2O94868 740 aa26.73■■□□□ 1.87
CDH5-202ENST00000539168 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
CDH5-202ENST00000539168 KIF1AQ12756 1690 aa26.72■■□□□ 1.87
CDH5-202ENST00000539168 TCP11L2Q8N4U5 519 aa26.72■■□□□ 1.87
CDH5-202ENST00000539168 EMILIN1Q9Y6C2 1016 aa26.72■■□□□ 1.87
CDH5-202ENST00000539168 PIK3C2AO00443 1686 aa26.72■■□□□ 1.87
CDH5-202ENST00000539168 TMEM94Q12767 1356 aa26.72■■□□□ 1.87
CDH5-202ENST00000539168 NEFMP07197 916 aa26.7■■□□□ 1.87
CDH5-202ENST00000539168 ATF3P18847 181 aa26.7■■□□□ 1.87
CDH5-202ENST00000539168 RNF123Q5XPI4 1314 aa26.7■■□□□ 1.86
CDH5-202ENST00000539168 MAPK8IP3Q9UPT6 1336 aa26.7■■□□□ 1.86
CDH5-202ENST00000539168 KIF24Q5T7B8 1368 aa26.69■■□□□ 1.86
CDH5-202ENST00000539168 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
CDH5-202ENST00000539168 E9PSI1 815 aa26.69■■□□□ 1.86
CDH5-202ENST00000539168 PSME1Q06323 249 aa26.69■■□□□ 1.86
CDH5-202ENST00000539168 CDCA7LQ96GN5 454 aa26.69■■□□□ 1.86
CDH5-202ENST00000539168 C1orf167Q5SNV9 1468 aa26.67■■□□□ 1.86
CDH5-202ENST00000539168 IL13P35225 146 aa26.67■■□□□ 1.86
CDH5-202ENST00000539168 NLRP6P59044 892 aa26.67■■□□□ 1.86
CDH5-202ENST00000539168 RRS1Q15050 365 aaKnown RBP26.67■■□□□ 1.86
CDH5-202ENST00000539168 CADPS2Q86UW7 1296 aa26.67■■□□□ 1.86
CDH5-202ENST00000539168 PLEKHF1Q96S99 279 aa26.67■■□□□ 1.86
CDH5-202ENST00000539168 SLFN5Q08AF3 891 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 WDR63Q8IWG1 891 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 ABTB2Q8N961 1025 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
CDH5-202ENST00000539168 FBLN1P23142 703 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 WWC1Q8IX03 1113 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 RCAN3Q9UKA8 241 aa26.66■■□□□ 1.86
CDH5-202ENST00000539168 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
CDH5-202ENST00000539168 MSH6P52701 1360 aa26.65■■□□□ 1.86
CDH5-202ENST00000539168 TRMT2AQ8IZ69 625 aaKnown RBP26.64■■□□□ 1.86
CDH5-202ENST00000539168 SBNO1A3KN83 1393 aa26.64■■□□□ 1.85
CDH5-202ENST00000539168 PAK3O75914 559 aaPredicted RBP26.63■■□□□ 1.85
CDH5-202ENST00000539168 DUSP27Q5VZP5 1158 aa26.63■■□□□ 1.85
CDH5-202ENST00000539168 FLT4P35916 1363 aa26.62■■□□□ 1.85
CDH5-202ENST00000539168 MST1RQ04912 1400 aa26.62■■□□□ 1.85
CDH5-202ENST00000539168 RSPH6AQ9H0K4 717 aa26.6■■□□□ 1.85
CDH5-202ENST00000539168 ORAI2Q96SN7 254 aa26.6■■□□□ 1.85
CDH5-202ENST00000539168 TMPOP42166 694 aaKnown RBP26.59■■□□□ 1.85
CDH5-202ENST00000539168 KCNH5Q8NCM2 988 aa26.59■■□□□ 1.85
CDH5-202ENST00000539168 MAP3K19Q56UN5 1328 aa26.58■■□□□ 1.85
CDH5-202ENST00000539168 MARF1Q9Y4F3 1742 aaKnown RBP26.58■■□□□ 1.85
CDH5-202ENST00000539168 NEUROD2Q15784 382 aa26.57■■□□□ 1.84
CDH5-202ENST00000539168 RTL1A6NKG5 1358 aa26.56■■□□□ 1.84
CDH5-202ENST00000539168 PRKAR2BP31323 418 aa26.56■■□□□ 1.84
CDH5-202ENST00000539168 AMPHP49418 695 aa26.56■■□□□ 1.84
CDH5-202ENST00000539168 PEAK1Q9H792 1746 aa26.56■■□□□ 1.84
CDH5-202ENST00000539168 FOXO3O43524 673 aa26.55■■□□□ 1.84
CDH5-202ENST00000539168 EIF4A2Q14240 407 aaKnown RBP26.55■■□□□ 1.84
CDH5-202ENST00000539168 RRP7AQ9Y3A4 280 aaKnown RBP26.55■■□□□ 1.84
CDH5-202ENST00000539168 MYH16Q9H6N6 1097 aa26.54■■□□□ 1.84
CDH5-202ENST00000539168 IL16Q14005 1332 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms