RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 NRKQ7Z2Y5 1582 aa27.04■■□□□ 1.92
SMPDL3A-203ENST00000539041 ADAMTSL3P82987 1691 aa27.04■■□□□ 1.92
SMPDL3A-203ENST00000539041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.04■■□□□ 1.92
SMPDL3A-203ENST00000539041 WWC1Q8IX03 1113 aa27.04■■□□□ 1.92
SMPDL3A-203ENST00000539041 TCP11L2Q8N4U5 519 aa27.04■■□□□ 1.92
SMPDL3A-203ENST00000539041 U2AF1L5P0DN76 240 aaPredicted RBP27.03■■□□□ 1.92
SMPDL3A-203ENST00000539041 U2AF1Q01081 240 aaKnown RBP eCLIP27.03■■□□□ 1.92
SMPDL3A-203ENST00000539041 SPINK5Q9NQ38 1064 aaPredicted RBP27.03■■□□□ 1.92
SMPDL3A-203ENST00000539041 TBX22Q9Y458 520 aa27.03■■□□□ 1.92
SMPDL3A-203ENST00000539041 NCBP3Q53F19 620 aaKnown RBP27.02■■□□□ 1.92
SMPDL3A-203ENST00000539041 SLC26A8Q96RN1 970 aa27.02■■□□□ 1.92
SMPDL3A-203ENST00000539041 PTCH1Q13635 1447 aa27.01■■□□□ 1.91
SMPDL3A-203ENST00000539041 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
SMPDL3A-203ENST00000539041 PRR36Q9H6K5 1346 aa27.01■■□□□ 1.91
SMPDL3A-203ENST00000539041 PLIN1O60240 522 aa26.99■■□□□ 1.91
SMPDL3A-203ENST00000539041 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
SMPDL3A-203ENST00000539041 DMRT2Q9Y5R5 561 aa26.99■■□□□ 1.91
SMPDL3A-203ENST00000539041 CCDC27Q2M243 656 aa26.99■■□□□ 1.91
SMPDL3A-203ENST00000539041 RGPD8O14715 1765 aaPredicted RBP26.98■■□□□ 1.91
SMPDL3A-203ENST00000539041 RRP7AQ9Y3A4 280 aaKnown RBP26.97■■□□□ 1.91
SMPDL3A-203ENST00000539041 ZNF692Q9BU19 519 aaPredicted RBP26.97■■□□□ 1.91
SMPDL3A-203ENST00000539041 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 U2SURPO15042 1029 aaKnown RBP26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 DIAPH1O60610 1272 aaKnown RBP26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 NEUROD2Q15784 382 aa26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 WDR63Q8IWG1 891 aa26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 AMOTL2Q9Y2J4 779 aa26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 SETD1BQ9UPS6 1966 aaKnown RBP26.96■■□□□ 1.91
SMPDL3A-203ENST00000539041 NME9Q86XW9 330 aa26.93■■□□□ 1.9
SMPDL3A-203ENST00000539041 CRBNQ96SW2 442 aa26.93■■□□□ 1.9
SMPDL3A-203ENST00000539041 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 NALCNQ8IZF0 1738 aa26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 CDK12Q9NYV4 1490 aaPredicted RBP26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 PLEKHF1Q96S99 279 aa26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 POLKQ9UBT6 870 aa26.92■■□□□ 1.9
SMPDL3A-203ENST00000539041 RBM19Q9Y4C8 960 aaKnown RBP26.91■■□□□ 1.9
SMPDL3A-203ENST00000539041 LRRC7Q96NW7 1537 aa26.9■■□□□ 1.9
SMPDL3A-203ENST00000539041 PIK3R4Q99570 1358 aa26.9■■□□□ 1.9
SMPDL3A-203ENST00000539041 PNNQ9H307 717 aaKnown RBP26.89■■□□□ 1.9
SMPDL3A-203ENST00000539041 MAPK8IP3Q9UPT6 1336 aa26.89■■□□□ 1.89
SMPDL3A-203ENST00000539041 PLEKHG3A1L390 1219 aa26.89■■□□□ 1.89
SMPDL3A-203ENST00000539041 COG3Q96JB2 828 aa26.89■■□□□ 1.89
SMPDL3A-203ENST00000539041 FMN2Q9NZ56 1722 aa26.88■■□□□ 1.89
SMPDL3A-203ENST00000539041 C20orf194Q5TEA3 1177 aa26.86■■□□□ 1.89
SMPDL3A-203ENST00000539041 ZRANB1Q9UGI0 708 aa26.86■■□□□ 1.89
SMPDL3A-203ENST00000539041 ACEP12821 1306 aa26.86■■□□□ 1.89
SMPDL3A-203ENST00000539041 USP6P35125 1406 aa26.85■■□□□ 1.89
SMPDL3A-203ENST00000539041 FBLN1P23142 703 aa26.84■■□□□ 1.89
SMPDL3A-203ENST00000539041 TMPOP42166 694 aaKnown RBP26.84■■□□□ 1.89
SMPDL3A-203ENST00000539041 PPM1GO15355 546 aaPredicted RBP26.84■■□□□ 1.89
SMPDL3A-203ENST00000539041 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
SMPDL3A-203ENST00000539041 EMILIN1Q9Y6C2 1016 aa26.83■■□□□ 1.89
SMPDL3A-203ENST00000539041 FCHSD2O94868 740 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 MYH16Q9H6N6 1097 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 BCAR3O75815 825 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 OVOS2A0A0J9YW53 1432 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 OVOS2Q6IE36 1432 aa26.81■■□□□ 1.88
SMPDL3A-203ENST00000539041 SSH2Q76I76 1423 aa26.78■■□□□ 1.88
SMPDL3A-203ENST00000539041 ANKARQ7Z5J8 1434 aa26.78■■□□□ 1.88
SMPDL3A-203ENST00000539041 ANKLE2Q86XL3 938 aa26.78■■□□□ 1.88
SMPDL3A-203ENST00000539041 RSPH6AQ9H0K4 717 aa26.78■■□□□ 1.88
SMPDL3A-203ENST00000539041 TRIM35Q9UPQ4 493 aa26.77■■□□□ 1.88
SMPDL3A-203ENST00000539041 KCNA6P17658 529 aa26.76■■□□□ 1.87
SMPDL3A-203ENST00000539041 IL13P35225 146 aa26.76■■□□□ 1.87
SMPDL3A-203ENST00000539041 IL16Q14005 1332 aa26.75■■□□□ 1.87
SMPDL3A-203ENST00000539041 PEAK1Q9H792 1746 aa26.75■■□□□ 1.87
SMPDL3A-203ENST00000539041 NEFMP07197 916 aa26.74■■□□□ 1.87
SMPDL3A-203ENST00000539041 RIPK4P57078 832 aa26.74■■□□□ 1.87
SMPDL3A-203ENST00000539041 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
SMPDL3A-203ENST00000539041 PRKAR2BP31323 418 aa26.74■■□□□ 1.87
SMPDL3A-203ENST00000539041 RRS1Q15050 365 aaKnown RBP26.74■■□□□ 1.87
SMPDL3A-203ENST00000539041 PIK3C2AO00443 1686 aa26.73■■□□□ 1.87
SMPDL3A-203ENST00000539041 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
SMPDL3A-203ENST00000539041 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
SMPDL3A-203ENST00000539041 PDE3AQ14432 1141 aa26.71■■□□□ 1.87
SMPDL3A-203ENST00000539041 USP31Q70CQ4 1352 aa26.71■■□□□ 1.87
SMPDL3A-203ENST00000539041 FANCIQ9NVI1 1328 aa26.7■■□□□ 1.86
SMPDL3A-203ENST00000539041 PMFBP1Q8TBY8 1022 aa26.7■■□□□ 1.86
SMPDL3A-203ENST00000539041 RGPD1P0DJD0 1748 aa26.69■■□□□ 1.86
SMPDL3A-203ENST00000539041 MARF1Q9Y4F3 1742 aaKnown RBP26.69■■□□□ 1.86
SMPDL3A-203ENST00000539041 CT47B1P0C2W7 299 aaPredicted RBP26.69■■□□□ 1.86
SMPDL3A-203ENST00000539041 HMOX1P09601 288 aa26.69■■□□□ 1.86
SMPDL3A-203ENST00000539041 CANXP27824 592 aaKnown RBP26.69■■□□□ 1.86
SMPDL3A-203ENST00000539041 NGDNQ8NEJ9 315 aaKnown RBP26.68■■□□□ 1.86
SMPDL3A-203ENST00000539041 NFE2L2Q16236 605 aa26.66■■□□□ 1.86
SMPDL3A-203ENST00000539041 TSR2Q969E8 191 aaKnown RBP26.65■■□□□ 1.86
SMPDL3A-203ENST00000539041 KDM2BQ8NHM5 1336 aa26.65■■□□□ 1.86
SMPDL3A-203ENST00000539041 NPHP4O75161 1426 aaPredicted RBP26.64■■□□□ 1.86
SMPDL3A-203ENST00000539041 TCERG1O14776 1098 aaKnown RBP26.63■■□□□ 1.85
SMPDL3A-203ENST00000539041 PHACTR3Q96KR7 559 aa26.63■■□□□ 1.85
SMPDL3A-203ENST00000539041 EXOSC9Q06265 439 aaKnown RBP26.62■■□□□ 1.85
SMPDL3A-203ENST00000539041 CENPQQ7L2Z9 268 aaPredicted RBP26.62■■□□□ 1.85
SMPDL3A-203ENST00000539041 FRAT1Q92837 279 aaPredicted RBP26.61■■□□□ 1.85
SMPDL3A-203ENST00000539041 NWD1Q149M9 1564 aa26.6■■□□□ 1.85
SMPDL3A-203ENST00000539041 EIF4A2Q14240 407 aaKnown RBP26.6■■□□□ 1.85
SMPDL3A-203ENST00000539041 ADGRL3Q9HAR2 1447 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms