RNA–Protein interactions for RNA: ENST00000538263.5

CYB561A3-211, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-211ENST00000538263 PARD3Q8TEW0 1356 aa16.74■□□□□ 0.27
CYB561A3-211ENST00000538263 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
CYB561A3-211ENST00000538263 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
CYB561A3-211ENST00000538263 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
CYB561A3-211ENST00000538263 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
CYB561A3-211ENST00000538263 ZNF784Q8NCA9 323 aaPredicted RBP16.73■□□□□ 0.27
CYB561A3-211ENST00000538263 KCNQ2O43526 872 aa16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 FAM196AQ6ZSG2 479 aa16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 CHD4Q14839 1912 aa16.72■□□□□ 0.27
CYB561A3-211ENST00000538263 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
CYB561A3-211ENST00000538263 SENP3-EIF4A1A0A087X0R7 540 aa16.7■□□□□ 0.26
CYB561A3-211ENST00000538263 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
CYB561A3-211ENST00000538263 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
CYB561A3-211ENST00000538263 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
CYB561A3-211ENST00000538263 PDGFDQ9GZP0 370 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-211ENST00000538263 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
CYB561A3-211ENST00000538263 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
CYB561A3-211ENST00000538263 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
CYB561A3-211ENST00000538263 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
CYB561A3-211ENST00000538263 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
CYB561A3-211ENST00000538263 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
CYB561A3-211ENST00000538263 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
CYB561A3-211ENST00000538263 RGPD3A6NKT7 1758 aaPredicted RBP16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 RGPD4Q7Z3J3 1758 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-211ENST00000538263 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
CYB561A3-211ENST00000538263 LMO7Q8WWI1 1683 aa16.63■□□□□ 0.25
CYB561A3-211ENST00000538263 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
CYB561A3-211ENST00000538263 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
CYB561A3-211ENST00000538263 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
CYB561A3-211ENST00000538263 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
CYB561A3-211ENST00000538263 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
CYB561A3-211ENST00000538263 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
CYB561A3-211ENST00000538263 DLC1Q96QB1 1528 aa16.61■□□□□ 0.25
CYB561A3-211ENST00000538263 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
CYB561A3-211ENST00000538263 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
CYB561A3-211ENST00000538263 PTGER2P43116 358 aa16.6■□□□□ 0.25
CYB561A3-211ENST00000538263 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
CYB561A3-211ENST00000538263 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
CYB561A3-211ENST00000538263 BARGINQ6ZT62 677 aa16.6■□□□□ 0.25
CYB561A3-211ENST00000538263 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
CYB561A3-211ENST00000538263 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-211ENST00000538263 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
CYB561A3-211ENST00000538263 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-211ENST00000538263 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
CYB561A3-211ENST00000538263 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
CYB561A3-211ENST00000538263 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.24
CYB561A3-211ENST00000538263 ADGRB1O14514 1584 aa16.58■□□□□ 0.24
CYB561A3-211ENST00000538263 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
CYB561A3-211ENST00000538263 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
CYB561A3-211ENST00000538263 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
CYB561A3-211ENST00000538263 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
CYB561A3-211ENST00000538263 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
CYB561A3-211ENST00000538263 POGKQ9P215 609 aa16.55■□□□□ 0.24
CYB561A3-211ENST00000538263 PROM2Q8N271 834 aa16.54■□□□□ 0.24
CYB561A3-211ENST00000538263 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
CYB561A3-211ENST00000538263 ATP7BP35670 1465 aa16.54■□□□□ 0.24
CYB561A3-211ENST00000538263 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
CYB561A3-211ENST00000538263 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
CYB561A3-211ENST00000538263 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
CYB561A3-211ENST00000538263 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
CYB561A3-211ENST00000538263 AKAP12Q02952 1782 aa16.52■□□□□ 0.24
CYB561A3-211ENST00000538263 EVA1CP58658 441 aa16.51■□□□□ 0.23
CYB561A3-211ENST00000538263 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
CYB561A3-211ENST00000538263 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
CYB561A3-211ENST00000538263 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
CYB561A3-211ENST00000538263 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
CYB561A3-211ENST00000538263 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 PLSCR1O15162 318 aa16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
CYB561A3-211ENST00000538263 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
CYB561A3-211ENST00000538263 EIF3AQ14152 1382 aaKnown RBP16.47■□□□□ 0.23
CYB561A3-211ENST00000538263 CPDO75976 1380 aa16.46■□□□□ 0.23
CYB561A3-211ENST00000538263 RGPD5Q99666 1765 aa16.46■□□□□ 0.22
CYB561A3-211ENST00000538263 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
CYB561A3-211ENST00000538263 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
CYB561A3-211ENST00000538263 COL18A1P39060 1754 aa16.45■□□□□ 0.22
CYB561A3-211ENST00000538263 PAPPAQ13219 1627 aa16.45■□□□□ 0.22
CYB561A3-211ENST00000538263 USP19O94966 1318 aa16.45■□□□□ 0.22
CYB561A3-211ENST00000538263 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
CYB561A3-211ENST00000538263 CRB1P82279 1406 aa16.44■□□□□ 0.22
CYB561A3-211ENST00000538263 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
CYB561A3-211ENST00000538263 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
CYB561A3-211ENST00000538263 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
CYB561A3-211ENST00000538263 SLC15A2Q16348 729 aa16.42■□□□□ 0.22
CYB561A3-211ENST00000538263 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms