RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 ALS2Q96Q42 1657 aa32.39■■■□□ 2.78
CLTA-209ENST00000538225 SLC24A1O60721 1099 aa32.38■■■□□ 2.77
CLTA-209ENST00000538225 NUTM2GQ5VZR2 741 aa32.37■■■□□ 2.77
CLTA-209ENST00000538225 TMC1Q8TDI8 760 aa32.37■■■□□ 2.77
CLTA-209ENST00000538225 TMF1P82094 1093 aa32.34■■■□□ 2.77
CLTA-209ENST00000538225 ABTB2Q8N961 1025 aa32.34■■■□□ 2.77
CLTA-209ENST00000538225 PUS7Q96PZ0 661 aaKnown RBP32.33■■■□□ 2.77
CLTA-209ENST00000538225 USP6P35125 1406 aa32.33■■■□□ 2.77
CLTA-209ENST00000538225 ZNF692Q9BU19 519 aaPredicted RBP32.32■■■□□ 2.76
CLTA-209ENST00000538225 SLC12A5Q9H2X9 1139 aa32.32■■■□□ 2.76
CLTA-209ENST00000538225 USP21Q9UK80 565 aa32.29■■■□□ 2.76
CLTA-209ENST00000538225 MARF1Q9Y4F3 1742 aaKnown RBP32.29■■■□□ 2.76
CLTA-209ENST00000538225 EIF4G2P78344 907 aaKnown RBP eCLIP32.28■■■□□ 2.76
CLTA-209ENST00000538225 FNBP4Q8N3X1 1017 aaPredicted RBP32.28■■■□□ 2.76
CLTA-209ENST00000538225 BRD4O60885 1362 aaPredicted RBP32.28■■■□□ 2.76
CLTA-209ENST00000538225 ABCA3Q99758 1704 aa32.28■■■□□ 2.76
CLTA-209ENST00000538225 CPSF1Q10570 1443 aaKnown RBP32.27■■■□□ 2.76
CLTA-209ENST00000538225 KTN1Q86UP2 1357 aaKnown RBP32.27■■■□□ 2.76
CLTA-209ENST00000538225 QTRT2Q9H974 415 aaKnown RBP32.26■■■□□ 2.75
CLTA-209ENST00000538225 SSH2Q76I76 1423 aa32.25■■■□□ 2.75
CLTA-209ENST00000538225 HSPA5P11021 654 aaKnown RBP32.24■■■□□ 2.75
CLTA-209ENST00000538225 HDGFL2Q7Z4V5 671 aaPredicted RBP32.24■■■□□ 2.75
CLTA-209ENST00000538225 AKAP12Q02952 1782 aa32.24■■■□□ 2.75
CLTA-209ENST00000538225 NLRP13Q86W25 1043 aa32.23■■■□□ 2.75
CLTA-209ENST00000538225 TTC21BQ7Z4L5 1316 aa32.23■■■□□ 2.75
CLTA-209ENST00000538225 FAM83GA6ND36 823 aa32.22■■■□□ 2.75
CLTA-209ENST00000538225 TERF2IPQ9NYB0 399 aa32.22■■■□□ 2.75
CLTA-209ENST00000538225 CD163L1Q9NR16 1453 aa32.22■■■□□ 2.75
CLTA-209ENST00000538225 NLRP6P59044 892 aa32.21■■■□□ 2.75
CLTA-209ENST00000538225 CDCA8Q53HL2 280 aa32.21■■■□□ 2.75
CLTA-209ENST00000538225 RXRBP28702 533 aa32.2■■■□□ 2.75
CLTA-209ENST00000538225 CRYBG1Q9Y4K1 1723 aa32.2■■■□□ 2.74
CLTA-209ENST00000538225 BCL9LQ86UU0 1499 aa32.19■■■□□ 2.74
CLTA-209ENST00000538225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.18■■■□□ 2.74
CLTA-209ENST00000538225 NINLQ9Y2I6 1382 aa32.18■■■□□ 2.74
CLTA-209ENST00000538225 ZC3H6P61129 1189 aaKnown RBP32.17■■■□□ 2.74
CLTA-209ENST00000538225 TRPC5Q9UL62 973 aaPredicted RBP32.17■■■□□ 2.74
CLTA-209ENST00000538225 TTC21AQ8NDW8 1320 aa32.17■■■□□ 2.74
CLTA-209ENST00000538225 A0A1W2PP64 1363 aa32.17■■■□□ 2.74
CLTA-209ENST00000538225 SLIT2O94813 1529 aa32.16■■■□□ 2.74
CLTA-209ENST00000538225 USP19O94966 1318 aa32.16■■■□□ 2.74
CLTA-209ENST00000538225 UNC5CLQ8IV45 518 aa32.15■■■□□ 2.74
CLTA-209ENST00000538225 PRDM11Q9NQV5 511 aa32.15■■■□□ 2.74
CLTA-209ENST00000538225 PHRF1Q9P1Y6 1649 aaKnown RBP32.15■■■□□ 2.74
CLTA-209ENST00000538225 MON2Q7Z3U7 1717 aa32.14■■■□□ 2.74
CLTA-209ENST00000538225 PIK3C2AO00443 1686 aa32.13■■■□□ 2.73
CLTA-209ENST00000538225 GCP02774 474 aa32.13■■■□□ 2.73
CLTA-209ENST00000538225 NRKQ7Z2Y5 1582 aa32.13■■■□□ 2.73
CLTA-209ENST00000538225 KIAA0232Q92628 1395 aa32.13■■■□□ 2.73
CLTA-209ENST00000538225 RBM6P78332 1123 aaKnown RBP32.12■■■□□ 2.73
CLTA-209ENST00000538225 POLR3GLQ9BT43 218 aa32.12■■■□□ 2.73
CLTA-209ENST00000538225 ATRNO75882 1429 aa32.11■■■□□ 2.73
CLTA-209ENST00000538225 CHRNA2Q15822 529 aa32.11■■■□□ 2.73
CLTA-209ENST00000538225 BTG4Q9NY30 223 aa32.11■■■□□ 2.73
CLTA-209ENST00000538225 NME9Q86XW9 330 aa32.1■■■□□ 2.73
CLTA-209ENST00000538225 PLCH1Q4KWH8 1693 aa32.09■■■□□ 2.73
CLTA-209ENST00000538225 ZRANB1Q9UGI0 708 aa32.09■■■□□ 2.73
CLTA-209ENST00000538225 EDC4Q6P2E9 1401 aaKnown RBP32.09■■■□□ 2.73
CLTA-209ENST00000538225 SOCS7O14512 581 aa32.08■■■□□ 2.73
CLTA-209ENST00000538225 ANKRD36BQ8N2N9 1353 aa32.07■■■□□ 2.73
CLTA-209ENST00000538225 COL14A1Q05707 1796 aaKnown RBP32.07■■■□□ 2.72
CLTA-209ENST00000538225 ZBTB7CA1YPR0 619 aa32.05■■■□□ 2.72
CLTA-209ENST00000538225 SOX12O15370 315 aa32.05■■■□□ 2.72
CLTA-209ENST00000538225 GJD4Q96KN9 370 aaPredicted RBP32.05■■■□□ 2.72
CLTA-209ENST00000538225 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.04■■■□□ 2.72
CLTA-209ENST00000538225 NWD2Q9ULI1 1742 aa32.04■■■□□ 2.72
CLTA-209ENST00000538225 CCDC9Q9Y3X0 531 aaKnown RBP32.04■■■□□ 2.72
CLTA-209ENST00000538225 SLIT3O75094 1523 aa32.04■■■□□ 2.72
CLTA-209ENST00000538225 CPDO75976 1380 aa32.03■■■□□ 2.72
CLTA-209ENST00000538225 VPS72Q15906 364 aa32.02■■■□□ 2.72
CLTA-209ENST00000538225 KCNH5Q8NCM2 988 aa32.01■■■□□ 2.71
CLTA-209ENST00000538225 USP31Q70CQ4 1352 aa32.01■■■□□ 2.71
CLTA-209ENST00000538225 CDK12Q9NYV4 1490 aaPredicted RBP31.99■■■□□ 2.71
CLTA-209ENST00000538225 C11orf95C9JLR9 678 aaPredicted RBP31.99■■■□□ 2.71
CLTA-209ENST00000538225 STRN4Q9NRL3 753 aa31.98■■■□□ 2.71
CLTA-209ENST00000538225 MYOM1P52179 1685 aa31.98■■■□□ 2.71
CLTA-209ENST00000538225 RGS12O14924 1447 aa31.97■■■□□ 2.71
CLTA-209ENST00000538225 NRAPQ86VF7 1730 aa31.97■■■□□ 2.71
CLTA-209ENST00000538225 EVA1CP58658 441 aa31.96■■■□□ 2.71
CLTA-209ENST00000538225 CARD14Q9BXL6 1004 aa31.95■■■□□ 2.71
CLTA-209ENST00000538225 ARHGEF25Q86VW2 580 aa31.93■■■□□ 2.7
CLTA-209ENST00000538225 GLI3P10071 1580 aa31.93■■■□□ 2.7
CLTA-209ENST00000538225 CAMTA1Q9Y6Y1 1673 aa31.92■■■□□ 2.7
CLTA-209ENST00000538225 COG3Q96JB2 828 aa31.91■■■□□ 2.7
CLTA-209ENST00000538225 AATKQ6ZMQ8 1374 aa31.91■■■□□ 2.7
CLTA-209ENST00000538225 FYB1O15117 783 aa31.9■■■□□ 2.7
CLTA-209ENST00000538225 OVOS2A0A0J9YW53 1432 aa31.9■■■□□ 2.7
CLTA-209ENST00000538225 OVOS2Q6IE36 1432 aa31.9■■■□□ 2.7
CLTA-209ENST00000538225 NFAT5O94916 1531 aa31.9■■■□□ 2.7
CLTA-209ENST00000538225 USP54Q70EL1 1684 aa31.89■■■□□ 2.7
CLTA-209ENST00000538225 LMO7Q8WWI1 1683 aa31.89■■■□□ 2.7
CLTA-209ENST00000538225 GGNBP2Q9H3C7 697 aa31.89■■■□□ 2.7
CLTA-209ENST00000538225 SPATA31A5Q5VU36 1347 aa31.88■■■□□ 2.69
CLTA-209ENST00000538225 SPATA31A7Q8IWB4 1347 aa31.88■■■□□ 2.69
CLTA-209ENST00000538225 NSD3Q9BZ95 1437 aa31.88■■■□□ 2.69
CLTA-209ENST00000538225 AXIN2Q9Y2T1 843 aa31.87■■■□□ 2.69
CLTA-209ENST00000538225 LARP1Q6PKG0 1096 aaKnown RBP31.86■■■□□ 2.69
CLTA-209ENST00000538225 KIF7Q2M1P5 1343 aa31.85■■■□□ 2.69
CLTA-209ENST00000538225 FAM98CQ17RN3 349 aaKnown RBP31.85■■■□□ 2.69
CLTA-209ENST00000538225 PANK3Q9H999 370 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms