RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 POLR3AO14802 1390 aaPredicted RBP30.15■■■□□ 2.42
CHFR-212ENST00000536196 ROCK2O75116 1388 aaKnown RBP30.15■■■□□ 2.42
CHFR-212ENST00000536196 GLI3P10071 1580 aa30.14■■■□□ 2.42
CHFR-212ENST00000536196 SRPK2P78362 688 aaKnown RBP30.13■■■□□ 2.41
CHFR-212ENST00000536196 COL14A1Q05707 1796 aaKnown RBP30.13■■■□□ 2.41
CHFR-212ENST00000536196 PLEKHG3A1L390 1219 aa30.12■■■□□ 2.41
CHFR-212ENST00000536196 ACEP12821 1306 aa30.12■■■□□ 2.41
CHFR-212ENST00000536196 RALGAPBQ86X10 1494 aa30.12■■■□□ 2.41
CHFR-212ENST00000536196 PHRF1Q9P1Y6 1649 aaKnown RBP30.11■■■□□ 2.41
CHFR-212ENST00000536196 NRAPQ86VF7 1730 aa30.1■■■□□ 2.41
CHFR-212ENST00000536196 ATAD2Q6PL18 1390 aa30.1■■■□□ 2.41
CHFR-212ENST00000536196 NBPF8Q3BBV2 869 aa30.09■■■□□ 2.41
CHFR-212ENST00000536196 PPIP5K1Q6PFW1 1433 aa30.09■■■□□ 2.41
CHFR-212ENST00000536196 FAM83GA6ND36 823 aa30.08■■■□□ 2.41
CHFR-212ENST00000536196 CABP2Q9NPB3 220 aa30.08■■■□□ 2.41
CHFR-212ENST00000536196 TONSLQ96HA7 1378 aa30.06■■■□□ 2.4
CHFR-212ENST00000536196 VPS72Q15906 364 aa30.06■■■□□ 2.4
CHFR-212ENST00000536196 BRWD3Q6RI45 1802 aa30.06■■■□□ 2.4
CHFR-212ENST00000536196 EVC2Q86UK5 1308 aa30.03■■■□□ 2.4
CHFR-212ENST00000536196 CCDC9Q9Y3X0 531 aaKnown RBP30.02■■■□□ 2.4
CHFR-212ENST00000536196 BTG4Q9NY30 223 aa30.01■■■□□ 2.39
CHFR-212ENST00000536196 NUTM2GQ5VZR2 741 aa29.98■■■□□ 2.39
CHFR-212ENST00000536196 PRDM11Q9NQV5 511 aa29.98■■■□□ 2.39
CHFR-212ENST00000536196 BRD4O60885 1362 aaPredicted RBP29.98■■■□□ 2.39
CHFR-212ENST00000536196 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
CHFR-212ENST00000536196 NRKQ7Z2Y5 1582 aa29.96■■■□□ 2.39
CHFR-212ENST00000536196 CABP1Q9NZU7 370 aa29.96■■■□□ 2.39
CHFR-212ENST00000536196 EP400Q96L91 3159 aa29.95■■■□□ 2.39
CHFR-212ENST00000536196 KIAA0232Q92628 1395 aa29.95■■■□□ 2.39
CHFR-212ENST00000536196 AKAP12Q02952 1782 aa29.95■■■□□ 2.38
CHFR-212ENST00000536196 CARD11Q9BXL7 1154 aa29.94■■■□□ 2.38
CHFR-212ENST00000536196 USP6P35125 1406 aa29.94■■■□□ 2.38
CHFR-212ENST00000536196 SEPT12Q8IYM1 358 aa29.93■■■□□ 2.38
CHFR-212ENST00000536196 ONECUT3O60422 494 aaPredicted RBP29.92■■■□□ 2.38
CHFR-212ENST00000536196 SBNO2Q9Y2G9 1366 aa29.91■■■□□ 2.38
CHFR-212ENST00000536196 USP19O94966 1318 aa29.91■■■□□ 2.38
CHFR-212ENST00000536196 ZC3H6P61129 1189 aaKnown RBP29.9■■■□□ 2.38
CHFR-212ENST00000536196 NLRP13Q86W25 1043 aa29.9■■■□□ 2.38
CHFR-212ENST00000536196 CHRNA2Q15822 529 aa29.88■■■□□ 2.37
CHFR-212ENST00000536196 PIK3C2AO00443 1686 aa29.87■■■□□ 2.37
CHFR-212ENST00000536196 CCDC125Q86Z20 511 aa29.86■■■□□ 2.37
CHFR-212ENST00000536196 SPATA31A5Q5VU36 1347 aa29.86■■■□□ 2.37
CHFR-212ENST00000536196 SPATA31A7Q8IWB4 1347 aa29.86■■■□□ 2.37
CHFR-212ENST00000536196 A0A0G2JS52 829 aa29.85■■■□□ 2.37
CHFR-212ENST00000536196 MYT1Q01538 1121 aa29.85■■■□□ 2.37
CHFR-212ENST00000536196 FAM98CQ17RN3 349 aaKnown RBP29.85■■■□□ 2.37
CHFR-212ENST00000536196 CPDO75976 1380 aa29.85■■■□□ 2.37
CHFR-212ENST00000536196 SSH2Q76I76 1423 aa29.85■■■□□ 2.37
CHFR-212ENST00000536196 LMO7Q8WWI1 1683 aa29.85■■■□□ 2.37
CHFR-212ENST00000536196 ZNF692Q9BU19 519 aaPredicted RBP29.83■■■□□ 2.37
CHFR-212ENST00000536196 MON2Q7Z3U7 1717 aa29.82■■■□□ 2.36
CHFR-212ENST00000536196 THSD7AQ9UPZ6 1657 aa29.82■■■□□ 2.36
CHFR-212ENST00000536196 GCP02774 474 aa29.82■■■□□ 2.36
CHFR-212ENST00000536196 KRT27Q7Z3Y8 459 aa29.82■■■□□ 2.36
CHFR-212ENST00000536196 SLIT3O75094 1523 aa29.81■■■□□ 2.36
CHFR-212ENST00000536196 NLRP6P59044 892 aa29.81■■■□□ 2.36
CHFR-212ENST00000536196 STRN4Q9NRL3 753 aa29.81■■■□□ 2.36
CHFR-212ENST00000536196 CAMTA1Q9Y6Y1 1673 aa29.8■■■□□ 2.36
CHFR-212ENST00000536196 BLMP54132 1417 aaPredicted RBP29.79■■■□□ 2.36
CHFR-212ENST00000536196 CPSF1Q10570 1443 aaKnown RBP29.79■■■□□ 2.36
CHFR-212ENST00000536196 SPATA31A1Q5TZJ5 1347 aa29.77■■■□□ 2.36
CHFR-212ENST00000536196 TTC21BQ7Z4L5 1316 aa29.76■■■□□ 2.36
CHFR-212ENST00000536196 EVA1CP58658 441 aa29.76■■■□□ 2.35
CHFR-212ENST00000536196 KTN1Q86UP2 1357 aaKnown RBP29.76■■■□□ 2.35
CHFR-212ENST00000536196 TTC21AQ8NDW8 1320 aa29.75■■■□□ 2.35
CHFR-212ENST00000536196 COL5A2P05997 1499 aaPredicted RBP29.71■■■□□ 2.35
CHFR-212ENST00000536196 COL18A1P39060 1754 aa29.71■■■□□ 2.35
CHFR-212ENST00000536196 SF3B2Q13435 895 aaKnown RBP29.7■■■□□ 2.35
CHFR-212ENST00000536196 CD163L1Q9NR16 1453 aa29.69■■■□□ 2.34
CHFR-212ENST00000536196 RGPD1P0DJD0 1748 aa29.69■■■□□ 2.34
CHFR-212ENST00000536196 ZBTB7CA1YPR0 619 aa29.69■■■□□ 2.34
CHFR-212ENST00000536196 LARP1Q6PKG0 1096 aaKnown RBP29.69■■■□□ 2.34
CHFR-212ENST00000536196 USP54Q70EL1 1684 aa29.69■■■□□ 2.34
CHFR-212ENST00000536196 AATKQ6ZMQ8 1374 aa29.68■■■□□ 2.34
CHFR-212ENST00000536196 TMC1Q8TDI8 760 aa29.68■■■□□ 2.34
CHFR-212ENST00000536196 PUS7Q96PZ0 661 aaKnown RBP29.68■■■□□ 2.34
CHFR-212ENST00000536196 USP35Q9P2H5 1018 aa29.68■■■□□ 2.34
CHFR-212ENST00000536196 RGPD5Q99666 1765 aa29.67■■■□□ 2.34
CHFR-212ENST00000536196 ST20-MTHFSA0A0A6YYL1 179 aa29.67■■■□□ 2.34
CHFR-212ENST00000536196 BARGINQ6ZT62 677 aa29.66■■■□□ 2.34
CHFR-212ENST00000536196 KCNH5Q8NCM2 988 aa29.66■■■□□ 2.34
CHFR-212ENST00000536196 SLC24A1O60721 1099 aa29.65■■■□□ 2.34
CHFR-212ENST00000536196 HDGFL2Q7Z4V5 671 aaPredicted RBP29.65■■■□□ 2.34
CHFR-212ENST00000536196 TESK2Q96S53 571 aa29.65■■■□□ 2.34
CHFR-212ENST00000536196 CLSPNQ9HAW4 1339 aa29.65■■■□□ 2.34
CHFR-212ENST00000536196 TCP11L2Q8N4U5 519 aa29.64■■■□□ 2.34
CHFR-212ENST00000536196 NFAT5O94916 1531 aa29.63■■■□□ 2.33
CHFR-212ENST00000536196 PCGF6Q9BYE7 350 aa29.63■■■□□ 2.33
CHFR-212ENST00000536196 SLC12A5Q9H2X9 1139 aa29.63■■■□□ 2.33
CHFR-212ENST00000536196 CRB1P82279 1406 aa29.62■■■□□ 2.33
CHFR-212ENST00000536196 PARP4Q9UKK3 1724 aaKnown RBP29.62■■■□□ 2.33
CHFR-212ENST00000536196 THRAP3Q9Y2W1 955 aaKnown RBP29.62■■■□□ 2.33
CHFR-212ENST00000536196 FAM182BQ5T319 152 aa29.61■■■□□ 2.33
CHFR-212ENST00000536196 DEFB132Q7Z7B7 95 aa29.61■■■□□ 2.33
CHFR-212ENST00000536196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.61■■■□□ 2.33
CHFR-212ENST00000536196 TERF2IPQ9NYB0 399 aa29.61■■■□□ 2.33
CHFR-212ENST00000536196 ZRANB1Q9UGI0 708 aa29.61■■■□□ 2.33
CHFR-212ENST00000536196 EDC4Q6P2E9 1401 aaKnown RBP29.61■■■□□ 2.33
CHFR-212ENST00000536196 ARHGEF25Q86VW2 580 aa29.6■■■□□ 2.33
CHFR-212ENST00000536196 TIMELESSQ9UNS1 1208 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms