RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HSPA5P11021 654 aaKnown RBP31.85■■■□□ 2.69
SFSWAP-204ENST00000535399 SLC12A5Q9H2X9 1139 aa31.85■■■□□ 2.69
SFSWAP-204ENST00000535399 SSH2Q76I76 1423 aa31.84■■■□□ 2.69
SFSWAP-204ENST00000535399 TMC1Q8TDI8 760 aa31.84■■■□□ 2.69
SFSWAP-204ENST00000535399 ZNF692Q9BU19 519 aaPredicted RBP31.84■■■□□ 2.69
SFSWAP-204ENST00000535399 C8orf37Q96NL8 207 aa31.83■■■□□ 2.69
SFSWAP-204ENST00000535399 PLEKHG5O94827 1062 aa31.82■■■□□ 2.68
SFSWAP-204ENST00000535399 CD163L1Q9NR16 1453 aa31.81■■■□□ 2.68
SFSWAP-204ENST00000535399 AFF2P51816 1311 aa31.79■■■□□ 2.68
SFSWAP-204ENST00000535399 NINLQ9Y2I6 1382 aa31.79■■■□□ 2.68
SFSWAP-204ENST00000535399 CDCA8Q53HL2 280 aa31.78■■■□□ 2.68
SFSWAP-204ENST00000535399 NUTM2GQ5VZR2 741 aa31.78■■■□□ 2.68
SFSWAP-204ENST00000535399 POTEAQ6S8J7 498 aa31.78■■■□□ 2.68
SFSWAP-204ENST00000535399 ABTB2Q8N961 1025 aa31.78■■■□□ 2.68
SFSWAP-204ENST00000535399 HAP1P54257 671 aaPredicted RBP31.77■■■□□ 2.68
SFSWAP-204ENST00000535399 ILDR2Q71H61 639 aa31.77■■■□□ 2.68
SFSWAP-204ENST00000535399 NGLY1Q96IV0 654 aa31.77■■■□□ 2.68
SFSWAP-204ENST00000535399 KTN1Q86UP2 1357 aaKnown RBP31.77■■■□□ 2.68
SFSWAP-204ENST00000535399 TTC21BQ7Z4L5 1316 aa31.76■■■□□ 2.68
SFSWAP-204ENST00000535399 ZNF772Q68DY9 489 aaPredicted RBP31.75■■■□□ 2.67
SFSWAP-204ENST00000535399 HDGFL2Q7Z4V5 671 aaPredicted RBP31.74■■■□□ 2.67
SFSWAP-204ENST00000535399 FNBP4Q8N3X1 1017 aaPredicted RBP31.74■■■□□ 2.67
SFSWAP-204ENST00000535399 AKAP12Q02952 1782 aa31.73■■■□□ 2.67
SFSWAP-204ENST00000535399 ABCA3Q99758 1704 aa31.73■■■□□ 2.67
SFSWAP-204ENST00000535399 TERF2IPQ9NYB0 399 aa31.73■■■□□ 2.67
SFSWAP-204ENST00000535399 A0A1W2PP64 1363 aa31.72■■■□□ 2.67
SFSWAP-204ENST00000535399 USP19O94966 1318 aa31.72■■■□□ 2.67
SFSWAP-204ENST00000535399 TTC21AQ8NDW8 1320 aa31.71■■■□□ 2.67
SFSWAP-204ENST00000535399 NLRP13Q86W25 1043 aa31.7■■■□□ 2.67
SFSWAP-204ENST00000535399 CRYBG1Q9Y4K1 1723 aa31.69■■■□□ 2.66
SFSWAP-204ENST00000535399 NRKQ7Z2Y5 1582 aa31.68■■■□□ 2.66
SFSWAP-204ENST00000535399 MON2Q7Z3U7 1717 aa31.67■■■□□ 2.66
SFSWAP-204ENST00000535399 NLRP6P59044 892 aa31.67■■■□□ 2.66
SFSWAP-204ENST00000535399 USP21Q9UK80 565 aa31.67■■■□□ 2.66
SFSWAP-204ENST00000535399 ANKRD36BQ8N2N9 1353 aa31.67■■■□□ 2.66
SFSWAP-204ENST00000535399 EDC4Q6P2E9 1401 aaKnown RBP31.66■■■□□ 2.66
SFSWAP-204ENST00000535399 MARF1Q9Y4F3 1742 aaKnown RBP31.66■■■□□ 2.66
SFSWAP-204ENST00000535399 FAM83GA6ND36 823 aa31.66■■■□□ 2.66
SFSWAP-204ENST00000535399 BCL9LQ86UU0 1499 aa31.65■■■□□ 2.66
SFSWAP-204ENST00000535399 SLIT2O94813 1529 aa31.65■■■□□ 2.66
SFSWAP-204ENST00000535399 PIK3C2AO00443 1686 aa31.64■■■□□ 2.66
SFSWAP-204ENST00000535399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.64■■■□□ 2.66
SFSWAP-204ENST00000535399 GCP02774 474 aa31.62■■■□□ 2.65
SFSWAP-204ENST00000535399 PHRF1Q9P1Y6 1649 aaKnown RBP31.62■■■□□ 2.65
SFSWAP-204ENST00000535399 C11orf95C9JLR9 678 aaPredicted RBP31.61■■■□□ 2.65
SFSWAP-204ENST00000535399 QTRT2Q9H974 415 aaKnown RBP31.61■■■□□ 2.65
SFSWAP-204ENST00000535399 KIAA0232Q92628 1395 aa31.6■■■□□ 2.65
SFSWAP-204ENST00000535399 ZC3H6P61129 1189 aaKnown RBP31.6■■■□□ 2.65
SFSWAP-204ENST00000535399 NME9Q86XW9 330 aa31.6■■■□□ 2.65
SFSWAP-204ENST00000535399 USP31Q70CQ4 1352 aa31.59■■■□□ 2.65
SFSWAP-204ENST00000535399 UNC5CLQ8IV45 518 aa31.59■■■□□ 2.65
SFSWAP-204ENST00000535399 ZRANB1Q9UGI0 708 aa31.59■■■□□ 2.65
SFSWAP-204ENST00000535399 SLIT3O75094 1523 aa31.59■■■□□ 2.65
SFSWAP-204ENST00000535399 POLR3GLQ9BT43 218 aa31.58■■■□□ 2.65
SFSWAP-204ENST00000535399 PRDM11Q9NQV5 511 aa31.58■■■□□ 2.65
SFSWAP-204ENST00000535399 ATRNO75882 1429 aa31.58■■■□□ 2.65
SFSWAP-204ENST00000535399 TRPC5Q9UL62 973 aaPredicted RBP31.57■■■□□ 2.64
SFSWAP-204ENST00000535399 CPDO75976 1380 aa31.56■■■□□ 2.64
SFSWAP-204ENST00000535399 MYOM1P52179 1685 aa31.56■■■□□ 2.64
SFSWAP-204ENST00000535399 RXRBP28702 533 aa31.54■■■□□ 2.64
SFSWAP-204ENST00000535399 CHRNA2Q15822 529 aa31.54■■■□□ 2.64
SFSWAP-204ENST00000535399 CARD14Q9BXL6 1004 aa31.53■■■□□ 2.64
SFSWAP-204ENST00000535399 BTG4Q9NY30 223 aa31.53■■■□□ 2.64
SFSWAP-204ENST00000535399 RBM6P78332 1123 aaKnown RBP31.52■■■□□ 2.64
SFSWAP-204ENST00000535399 COL14A1Q05707 1796 aaKnown RBP31.52■■■□□ 2.64
SFSWAP-204ENST00000535399 KCNH5Q8NCM2 988 aa31.5■■■□□ 2.63
SFSWAP-204ENST00000535399 PLCH1Q4KWH8 1693 aa31.5■■■□□ 2.63
SFSWAP-204ENST00000535399 OVOS2A0A0J9YW53 1432 aa31.49■■■□□ 2.63
SFSWAP-204ENST00000535399 OVOS2Q6IE36 1432 aa31.49■■■□□ 2.63
SFSWAP-204ENST00000535399 KIF7Q2M1P5 1343 aa31.49■■■□□ 2.63
SFSWAP-204ENST00000535399 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.48■■■□□ 2.63
SFSWAP-204ENST00000535399 NWD2Q9ULI1 1742 aa31.48■■■□□ 2.63
SFSWAP-204ENST00000535399 VPS72Q15906 364 aa31.47■■■□□ 2.63
SFSWAP-204ENST00000535399 USP54Q70EL1 1684 aa31.47■■■□□ 2.63
SFSWAP-204ENST00000535399 NFAT5O94916 1531 aa31.46■■■□□ 2.63
SFSWAP-204ENST00000535399 SOX12O15370 315 aa31.46■■■□□ 2.63
SFSWAP-204ENST00000535399 GJD4Q96KN9 370 aaPredicted RBP31.46■■■□□ 2.63
SFSWAP-204ENST00000535399 FYB1O15117 783 aa31.45■■■□□ 2.63
SFSWAP-204ENST00000535399 ARHGEF25Q86VW2 580 aa31.45■■■□□ 2.63
SFSWAP-204ENST00000535399 NSD3Q9BZ95 1437 aa31.45■■■□□ 2.63
SFSWAP-204ENST00000535399 CDK12Q9NYV4 1490 aaPredicted RBP31.44■■■□□ 2.62
SFSWAP-204ENST00000535399 NRAPQ86VF7 1730 aa31.43■■■□□ 2.62
SFSWAP-204ENST00000535399 AATKQ6ZMQ8 1374 aa31.43■■■□□ 2.62
SFSWAP-204ENST00000535399 COG3Q96JB2 828 aa31.42■■■□□ 2.62
SFSWAP-204ENST00000535399 CAMTA1Q9Y6Y1 1673 aa31.41■■■□□ 2.62
SFSWAP-204ENST00000535399 ZBTB7CA1YPR0 619 aa31.41■■■□□ 2.62
SFSWAP-204ENST00000535399 PANK3Q9H999 370 aa31.41■■■□□ 2.62
SFSWAP-204ENST00000535399 LMO7Q8WWI1 1683 aa31.41■■■□□ 2.62
SFSWAP-204ENST00000535399 GGNBP2Q9H3C7 697 aa31.4■■■□□ 2.62
SFSWAP-204ENST00000535399 RGS12O14924 1447 aa31.39■■■□□ 2.62
SFSWAP-204ENST00000535399 CCDC9Q9Y3X0 531 aaKnown RBP31.38■■■□□ 2.61
SFSWAP-204ENST00000535399 STRN4Q9NRL3 753 aa31.37■■■□□ 2.61
SFSWAP-204ENST00000535399 CCDC7Q96M83 1385 aa31.37■■■□□ 2.61
SFSWAP-204ENST00000535399 GLI3P10071 1580 aa31.37■■■□□ 2.61
SFSWAP-204ENST00000535399 AXIN2Q9Y2T1 843 aa31.36■■■□□ 2.61
SFSWAP-204ENST00000535399 SPATA31A5Q5VU36 1347 aa31.35■■■□□ 2.61
SFSWAP-204ENST00000535399 WASHC2AQ641Q2 1341 aa31.35■■■□□ 2.61
SFSWAP-204ENST00000535399 SPATA31A7Q8IWB4 1347 aa31.35■■■□□ 2.61
SFSWAP-204ENST00000535399 SOCS7O14512 581 aa31.34■■■□□ 2.61
SFSWAP-204ENST00000535399 EVA1CP58658 441 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms