RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
TMEM258-202ENST00000535042 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
TMEM258-202ENST00000535042 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
TMEM258-202ENST00000535042 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
TMEM258-202ENST00000535042 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
TMEM258-202ENST00000535042 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 MYOM1P52179 1685 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 BRD4O60885 1362 aaPredicted RBP18.22■□□□□ 0.51
TMEM258-202ENST00000535042 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 NUTM2GQ5VZR2 741 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 SPATA31A6Q5VVP1 1343 aa18.22■□□□□ 0.51
TMEM258-202ENST00000535042 ARHGEF10O15013 1369 aa18.21■□□□□ 0.51
TMEM258-202ENST00000535042 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
TMEM258-202ENST00000535042 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
TMEM258-202ENST00000535042 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
TMEM258-202ENST00000535042 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
TMEM258-202ENST00000535042 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.51
TMEM258-202ENST00000535042 ALS2Q96Q42 1657 aa18.21■□□□□ 0.51
TMEM258-202ENST00000535042 LRP6O75581 1613 aa18.2■□□□□ 0.5
TMEM258-202ENST00000535042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
TMEM258-202ENST00000535042 ABTB2Q8N961 1025 aa18.2■□□□□ 0.5
TMEM258-202ENST00000535042 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
TMEM258-202ENST00000535042 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
TMEM258-202ENST00000535042 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
TMEM258-202ENST00000535042 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
TMEM258-202ENST00000535042 NME9Q86XW9 330 aa18.18■□□□□ 0.5
TMEM258-202ENST00000535042 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
TMEM258-202ENST00000535042 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
TMEM258-202ENST00000535042 PANK3Q9H999 370 aa18.17■□□□□ 0.5
TMEM258-202ENST00000535042 NLRP6P59044 892 aa18.16■□□□□ 0.5
TMEM258-202ENST00000535042 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
TMEM258-202ENST00000535042 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
TMEM258-202ENST00000535042 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
TMEM258-202ENST00000535042 PIK3C2AO00443 1686 aa18.14■□□□□ 0.49
TMEM258-202ENST00000535042 USP19O94966 1318 aa18.14■□□□□ 0.49
TMEM258-202ENST00000535042 NSD3Q9BZ95 1437 aa18.14■□□□□ 0.49
TMEM258-202ENST00000535042 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
TMEM258-202ENST00000535042 FYB1O15117 783 aa18.12■□□□□ 0.49
TMEM258-202ENST00000535042 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
TMEM258-202ENST00000535042 CRYBG1Q9Y4K1 1723 aa18.1■□□□□ 0.49
TMEM258-202ENST00000535042 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
TMEM258-202ENST00000535042 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
TMEM258-202ENST00000535042 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
TMEM258-202ENST00000535042 GCP02774 474 aa18.09■□□□□ 0.49
TMEM258-202ENST00000535042 SLIT3O75094 1523 aa18.08■□□□□ 0.49
TMEM258-202ENST00000535042 OVOS2A0A0J9YW53 1432 aa18.08■□□□□ 0.49
TMEM258-202ENST00000535042 OVOS2Q6IE36 1432 aa18.08■□□□□ 0.49
TMEM258-202ENST00000535042 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
TMEM258-202ENST00000535042 ZC3H6P61129 1189 aaKnown RBP18.08■□□□□ 0.48
TMEM258-202ENST00000535042 C8orf37Q96NL8 207 aa18.08■□□□□ 0.48
TMEM258-202ENST00000535042 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
TMEM258-202ENST00000535042 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
TMEM258-202ENST00000535042 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
TMEM258-202ENST00000535042 SOX12O15370 315 aa18.06■□□□□ 0.48
TMEM258-202ENST00000535042 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
TMEM258-202ENST00000535042 KIAA0232Q92628 1395 aa18.05■□□□□ 0.48
TMEM258-202ENST00000535042 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
TMEM258-202ENST00000535042 NGLY1Q96IV0 654 aa18.05■□□□□ 0.48
TMEM258-202ENST00000535042 COG3Q96JB2 828 aa18.05■□□□□ 0.48
TMEM258-202ENST00000535042 USP54Q70EL1 1684 aa18.04■□□□□ 0.48
TMEM258-202ENST00000535042 FBLN1P23142 703 aa18.04■□□□□ 0.48
TMEM258-202ENST00000535042 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
TMEM258-202ENST00000535042 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
TMEM258-202ENST00000535042 AFF2P51816 1311 aa18.03■□□□□ 0.48
TMEM258-202ENST00000535042 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
TMEM258-202ENST00000535042 FNBP4Q8N3X1 1017 aaPredicted RBP18.03■□□□□ 0.48
TMEM258-202ENST00000535042 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
TMEM258-202ENST00000535042 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
TMEM258-202ENST00000535042 CPDO75976 1380 aa18.03■□□□□ 0.48
TMEM258-202ENST00000535042 NFAT5O94916 1531 aa18.03■□□□□ 0.48
TMEM258-202ENST00000535042 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.48
TMEM258-202ENST00000535042 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
TMEM258-202ENST00000535042 SLIT2O94813 1529 aa18■□□□□ 0.47
TMEM258-202ENST00000535042 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
TMEM258-202ENST00000535042 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
TMEM258-202ENST00000535042 USP21Q9UK80 565 aa17.99■□□□□ 0.47
TMEM258-202ENST00000535042 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
TMEM258-202ENST00000535042 BCL9LQ86UU0 1499 aa17.99■□□□□ 0.47
TMEM258-202ENST00000535042 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
TMEM258-202ENST00000535042 NSD2O96028 1365 aa17.97■□□□□ 0.47
TMEM258-202ENST00000535042 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
TMEM258-202ENST00000535042 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
TMEM258-202ENST00000535042 AATKQ6ZMQ8 1374 aa17.96■□□□□ 0.47
TMEM258-202ENST00000535042 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
TMEM258-202ENST00000535042 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
TMEM258-202ENST00000535042 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
TMEM258-202ENST00000535042 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
TMEM258-202ENST00000535042 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
TMEM258-202ENST00000535042 MAP3K19Q56UN5 1328 aa17.96■□□□□ 0.46
TMEM258-202ENST00000535042 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
TMEM258-202ENST00000535042 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
TMEM258-202ENST00000535042 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
TMEM258-202ENST00000535042 NPC1L1Q9UHC9 1359 aa17.94■□□□□ 0.46
TMEM258-202ENST00000535042 PLCH1Q4KWH8 1693 aa17.94■□□□□ 0.46
TMEM258-202ENST00000535042 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
TMEM258-202ENST00000535042 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
TMEM258-202ENST00000535042 QTRT2Q9H974 415 aaKnown RBP17.93■□□□□ 0.46
TMEM258-202ENST00000535042 COL18A1P39060 1754 aa17.93■□□□□ 0.46
TMEM258-202ENST00000535042 ATRNO75882 1429 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms